RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
UBXN2A-203ENST00000446425 MAST4O15021 2626 aa9.99□□□□□ -0.81
UBXN2A-203ENST00000446425 DNAH9Q9NYC9 4486 aa9.97□□□□□ -0.81
UBXN2A-203ENST00000446425 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
UBXN2A-203ENST00000446425 UBE2DNLQ8IWF7 75 aa9.95□□□□□ -0.82
UBXN2A-203ENST00000446425 HECTD1Q9ULT8 2610 aa9.93□□□□□ -0.82
UBXN2A-203ENST00000446425 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
UBXN2A-203ENST00000446425 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
UBXN2A-203ENST00000446425 MIR22HGQ0VDD5 57 aa9.91□□□□□ -0.82
UBXN2A-203ENST00000446425 UQCR11O14957 56 aa9.9□□□□□ -0.82
UBXN2A-203ENST00000446425 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
UBXN2A-203ENST00000446425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
UBXN2A-203ENST00000446425 ANAPC11Q9NYG5 84 aa9.88□□□□□ -0.83
UBXN2A-203ENST00000446425 APLNQ9ULZ1 77 aa9.87□□□□□ -0.83
UBXN2A-203ENST00000446425 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
UBXN2A-203ENST00000446425 PSORS1C2Q9UIG4 136 aa9.84□□□□□ -0.83
UBXN2A-203ENST00000446425 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
UBXN2A-203ENST00000446425 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
UBXN2A-203ENST00000446425 ZNF861PO60384 105 aa9.84□□□□□ -0.83
UBXN2A-203ENST00000446425 KRTAP24-1Q3LI83 254 aa9.83□□□□□ -0.84
UBXN2A-203ENST00000446425 IGKV2-30P06310 120 aa9.82□□□□□ -0.84
UBXN2A-203ENST00000446425 Q6ZRN7 208 aaPredicted RBP9.81□□□□□ -0.84
UBXN2A-203ENST00000446425 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
UBXN2A-203ENST00000446425 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
UBXN2A-203ENST00000446425 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
UBXN2A-203ENST00000446425 NOTCH1P46531 2555 aa9.77□□□□□ -0.84
UBXN2A-203ENST00000446425 CSAG1Q6PB30 78 aa9.75□□□□□ -0.85
UBXN2A-203ENST00000446425 CIRBP-AS1Q8TBR5 109 aa9.75□□□□□ -0.85
UBXN2A-203ENST00000446425 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
UBXN2A-203ENST00000446425 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
UBXN2A-203ENST00000446425 STAB1Q9NY15 2570 aa9.73□□□□□ -0.85
UBXN2A-203ENST00000446425 H3BS24 57 aa9.73□□□□□ -0.85
UBXN2A-203ENST00000446425 DYNC2H1Q8NCM8 4307 aaKnown RBP9.72□□□□□ -0.85
UBXN2A-203ENST00000446425 SSBP3-AS1Q7Z2R9 100 aa9.71□□□□□ -0.86
UBXN2A-203ENST00000446425 DNAH7Q8WXX0 4024 aa9.69□□□□□ -0.86
UBXN2A-203ENST00000446425 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
UBXN2A-203ENST00000446425 A0A087WTM6 91 aa9.66□□□□□ -0.86
UBXN2A-203ENST00000446425 FRAS1Q86XX4 4008 aa9.65□□□□□ -0.86
UBXN2A-203ENST00000446425 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
UBXN2A-203ENST00000446425 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
UBXN2A-203ENST00000446425 HECTD4Q9Y4D8 3996 aa9.6□□□□□ -0.87
UBXN2A-203ENST00000446425 STAB2Q8WWQ8 2551 aa9.6□□□□□ -0.87
UBXN2A-203ENST00000446425 PLECQ15149 4684 aaKnown RBP9.55□□□□□ -0.88
UBXN2A-203ENST00000446425 NUPR2A6NF83 97 aa9.53□□□□□ -0.88
UBXN2A-203ENST00000446425 LY6G6CO95867 125 aa9.5□□□□□ -0.89
UBXN2A-203ENST00000446425 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
UBXN2A-203ENST00000446425 A8MUU9 505 aa9.48□□□□□ -0.89
UBXN2A-203ENST00000446425 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
UBXN2A-203ENST00000446425 SPINK1P00995 79 aa9.47□□□□□ -0.89
UBXN2A-203ENST00000446425 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
UBXN2A-203ENST00000446425 KRTAP25-1Q3LHN0 102 aa9.46□□□□□ -0.89
UBXN2A-203ENST00000446425 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
UBXN2A-203ENST00000446425 Q6ZSA8 131 aa9.44□□□□□ -0.9
UBXN2A-203ENST00000446425 H0YAA0 97 aa9.43□□□□□ -0.9
UBXN2A-203ENST00000446425 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
UBXN2A-203ENST00000446425 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
UBXN2A-203ENST00000446425 Q8N1X5 172 aa9.4□□□□□ -0.91
UBXN2A-203ENST00000446425 ROMO1P60602 79 aa9.37□□□□□ -0.91
UBXN2A-203ENST00000446425 TGP01266 2768 aa9.34□□□□□ -0.91
UBXN2A-203ENST00000446425 A0A1B0GU33 70 aa9.33□□□□□ -0.92
UBXN2A-203ENST00000446425 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
UBXN2A-203ENST00000446425 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
UBXN2A-203ENST00000446425 FBN3Q75N90 2809 aa9.32□□□□□ -0.92
UBXN2A-203ENST00000446425 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
UBXN2A-203ENST00000446425 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
UBXN2A-203ENST00000446425 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
UBXN2A-203ENST00000446425 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.92
UBXN2A-203ENST00000446425 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
UBXN2A-203ENST00000446425 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
UBXN2A-203ENST00000446425 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
UBXN2A-203ENST00000446425 K7ERS5 55 aa9.19□□□□□ -0.94
UBXN2A-203ENST00000446425 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
UBXN2A-203ENST00000446425 DNAH6Q9C0G6 4158 aa9.15□□□□□ -0.94
UBXN2A-203ENST00000446425 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
UBXN2A-203ENST00000446425 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
UBXN2A-203ENST00000446425 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
UBXN2A-203ENST00000446425 P0C880 135 aa9.08□□□□□ -0.96
UBXN2A-203ENST00000446425 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
UBXN2A-203ENST00000446425 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
UBXN2A-203ENST00000446425 COX6B2Q6YFQ2 88 aa9.06□□□□□ -0.96
UBXN2A-203ENST00000446425 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
UBXN2A-203ENST00000446425 KRTAP10-1P60331 282 aa9.04□□□□□ -0.96
UBXN2A-203ENST00000446425 FLG2Q5D862 2391 aaPredicted RBP9.03□□□□□ -0.96
UBXN2A-203ENST00000446425 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
UBXN2A-203ENST00000446425 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
UBXN2A-203ENST00000446425 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
UBXN2A-203ENST00000446425 PKD1P98161 4303 aa8.92□□□□□ -0.98
UBXN2A-203ENST00000446425 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
UBXN2A-203ENST00000446425 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
UBXN2A-203ENST00000446425 SACSQ9NZJ4 4579 aa8.83□□□□□ -1
UBXN2A-203ENST00000446425 KRTAP10-6P60371 365 aaPredicted RBP8.83□□□□□ -1
UBXN2A-203ENST00000446425 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
UBXN2A-203ENST00000446425 FAT2Q9NYQ8 4349 aa8.76□□□□□ -1.01
UBXN2A-203ENST00000446425 A0A0D9SG42 100 aa8.76□□□□□ -1.01
UBXN2A-203ENST00000446425 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
UBXN2A-203ENST00000446425 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
UBXN2A-203ENST00000446425 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
UBXN2A-203ENST00000446425 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
UBXN2A-203ENST00000446425 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
UBXN2A-203ENST00000446425 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms