RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 KIF21BO75037 1637 aa0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 H3BNG1 76 aa0.44□□□□□ -2.34
ATP13A3-204ENST00000446356 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
ATP13A3-204ENST00000446356 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
ATP13A3-204ENST00000446356 NF1P21359 2839 aa0.43□□□□□ -2.34
ATP13A3-204ENST00000446356 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 FLNAP21333 2647 aaKnown RBP0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 MMP24-AS1A0A0U1RRL7 71 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 A8MTW9 85 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 DCHS2Q6V1P9 2916 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 TRPM2O94759 1503 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 MAST4O15021 2626 aa0.42□□□□□ -2.34
ATP13A3-204ENST00000446356 FSIP2Q5CZC0 6907 aa0.41□□□□□ -2.34
ATP13A3-204ENST00000446356 M0QY20 66 aa0.41□□□□□ -2.34
ATP13A3-204ENST00000446356 NDUFA1O15239 70 aa0.41□□□□□ -2.34
ATP13A3-204ENST00000446356 FLNCQ14315 2725 aa0.4□□□□□ -2.35
ATP13A3-204ENST00000446356 A0A1B0GUL6 1792 aa0.4□□□□□ -2.35
ATP13A3-204ENST00000446356 NBASA2RRP1 2371 aa0.4□□□□□ -2.35
ATP13A3-204ENST00000446356 FAM208AQ9UK61 1670 aaKnown RBP0.39□□□□□ -2.35
ATP13A3-204ENST00000446356 LYSTQ99698 3801 aa0.39□□□□□ -2.35
ATP13A3-204ENST00000446356 M0QZ58 72 aa0.37□□□□□ -2.35
ATP13A3-204ENST00000446356 PKD1P98161 4303 aa0.37□□□□□ -2.35
ATP13A3-204ENST00000446356 IQGAP1P46940 1657 aa0.37□□□□□ -2.35
ATP13A3-204ENST00000446356 SPRR2AP35326 72 aa0.36□□□□□ -2.35
ATP13A3-204ENST00000446356 SRRM2Q9UQ35 2752 aaKnown RBP0.36□□□□□ -2.35
ATP13A3-204ENST00000446356 DDX60Q8IY21 1712 aaKnown RBP0.35□□□□□ -2.35
ATP13A3-204ENST00000446356 HSPG2P98160 4391 aa0.35□□□□□ -2.35
ATP13A3-204ENST00000446356 TNP1P09430 55 aa0.35□□□□□ -2.35
ATP13A3-204ENST00000446356 MTORP42345 2549 aa0.34□□□□□ -2.35
ATP13A3-204ENST00000446356 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.35
ATP13A3-204ENST00000446356 SPTBN4Q9H254 2564 aa0.34□□□□□ -2.35
ATP13A3-204ENST00000446356 COL7A1Q02388 2944 aa0.34□□□□□ -2.36
ATP13A3-204ENST00000446356 KMT2DO14686 5537 aa0.34□□□□□ -2.36
ATP13A3-204ENST00000446356 NFAT5O94916 1531 aa0.33□□□□□ -2.36
ATP13A3-204ENST00000446356 ATP7AQ04656 1500 aa0.33□□□□□ -2.36
ATP13A3-204ENST00000446356 ANKRD11Q6UB99 2663 aaPredicted RBP0.33□□□□□ -2.36
ATP13A3-204ENST00000446356 UTP20O75691 2785 aaKnown RBP0.33□□□□□ -2.36
ATP13A3-204ENST00000446356 SAMD9LQ8IVG5 1584 aa0.32□□□□□ -2.36
ATP13A3-204ENST00000446356 VPS13BQ7Z7G8 4022 aa0.32□□□□□ -2.36
ATP13A3-204ENST00000446356 GCN1Q92616 2671 aaKnown RBP0.32□□□□□ -2.36
ATP13A3-204ENST00000446356 ZZEF1O43149 2961 aa0.32□□□□□ -2.36
ATP13A3-204ENST00000446356 COL6A3P12111 3177 aa0.31□□□□□ -2.36
ATP13A3-204ENST00000446356 TENM2Q9NT68 2774 aa0.31□□□□□ -2.36
ATP13A3-204ENST00000446356 PKHD1P08F94 4074 aa0.3□□□□□ -2.36
ATP13A3-204ENST00000446356 EPG5Q9HCE0 2579 aa0.3□□□□□ -2.36
ATP13A3-204ENST00000446356 DEFB110Q30KQ9 67 aa0.3□□□□□ -2.36
ATP13A3-204ENST00000446356 SONP18583 2426 aaKnown RBP0.3□□□□□ -2.36
ATP13A3-204ENST00000446356 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
ATP13A3-204ENST00000446356 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
ATP13A3-204ENST00000446356 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
ATP13A3-204ENST00000446356 A0A0C4DFX4 3053 aa0.29□□□□□ -2.36
ATP13A3-204ENST00000446356 DNAH9Q9NYC9 4486 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 PDZD2O15018 2839 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 SPG11Q96JI7 2443 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 SACSQ9NZJ4 4579 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 MT1AP04731 61 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 LRRK2Q5S007 2527 aa0.28□□□□□ -2.36
ATP13A3-204ENST00000446356 TACC2O95359 2948 aa0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 CLTCL1P53675 1640 aa0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 FLGP20930 4061 aaPredicted RBP0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 DNAH3Q8TD57 4116 aa0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 TOP2AP11388 1531 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 NBEAQ8NFP9 2946 aa0.27□□□□□ -2.37
ATP13A3-204ENST00000446356 ACACAQ13085 2346 aa0.26□□□□□ -2.37
ATP13A3-204ENST00000446356 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
ATP13A3-204ENST00000446356 MAP1AP78559 2803 aaPredicted RBP0.26□□□□□ -2.37
ATP13A3-204ENST00000446356 KRTAP6-2Q3LI66 62 aa0.26□□□□□ -2.37
ATP13A3-204ENST00000446356 LRP2P98164 4655 aa0.25□□□□□ -2.37
ATP13A3-204ENST00000446356 ANKHD1Q8IWZ3 2542 aaKnown RBP0.25□□□□□ -2.37
ATP13A3-204ENST00000446356 NBEAL1Q6ZS30 2694 aa0.25□□□□□ -2.37
ATP13A3-204ENST00000446356 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
ATP13A3-204ENST00000446356 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
ATP13A3-204ENST00000446356 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 SPRR2EP22531 72 aa0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 FASNP49327 2511 aaKnown RBP0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 CUBNO60494 3623 aa0.24□□□□□ -2.37
ATP13A3-204ENST00000446356 ANK3Q12955 4377 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-204ENST00000446356 TGP01266 2768 aa0.23□□□□□ -2.37
ATP13A3-204ENST00000446356 HTTP42858 3142 aa0.22□□□□□ -2.37
ATP13A3-204ENST00000446356 POLR2KP53803 58 aaKnown RBP0.22□□□□□ -2.37
ATP13A3-204ENST00000446356 CLPSL2Q6UWE3 100 aa0.22□□□□□ -2.37
ATP13A3-204ENST00000446356 AKAP9Q99996 3911 aa0.22□□□□□ -2.37
ATP13A3-204ENST00000446356 KALRNO60229 2985 aa0.21□□□□□ -2.38
ATP13A3-204ENST00000446356 PKHD1L1Q86WI1 4243 aa0.21□□□□□ -2.38
ATP13A3-204ENST00000446356 TEP1Q99973 2627 aaKnown RBP0.19□□□□□ -2.38
ATP13A3-204ENST00000446356 NBEAL2Q6ZNJ1 2754 aa0.19□□□□□ -2.38
ATP13A3-204ENST00000446356 FAT3Q8TDW7 4589 aa0.19□□□□□ -2.38
ATP13A3-204ENST00000446356 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
ATP13A3-204ENST00000446356 FAM186AA6NE01 2351 aa0.19□□□□□ -2.38
ATP13A3-204ENST00000446356 DNAH2Q9P225 4427 aa0.18□□□□□ -2.38
ATP13A3-204ENST00000446356 SPART-AS1P0CW21 52 aa0.18□□□□□ -2.38
ATP13A3-204ENST00000446356 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
ATP13A3-204ENST00000446356 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
ATP13A3-204ENST00000446356 APOBP04114 4563 aaKnown RBP0.17□□□□□ -2.38
ATP13A3-204ENST00000446356 SNRPGP62308 76 aaKnown RBP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms