RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SPRR1BP22528 89 aa4.42□□□□□ -1.7
SF3A3P1-201ENST00000446317 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
SF3A3P1-201ENST00000446317 CCKP06307 115 aa4.41□□□□□ -1.7
SF3A3P1-201ENST00000446317 FAM229BQ4G0N7 80 aa4.41□□□□□ -1.7
SF3A3P1-201ENST00000446317 H7BZZ5 65 aa4.4□□□□□ -1.71
SF3A3P1-201ENST00000446317 NDUFS5O43920 106 aa4.4□□□□□ -1.71
SF3A3P1-201ENST00000446317 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
SF3A3P1-201ENST00000446317 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 IGFL1Q6UW32 110 aa4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
SF3A3P1-201ENST00000446317 TRAV7A0A075B6U4 112 aa4.38□□□□□ -1.71
SF3A3P1-201ENST00000446317 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
SF3A3P1-201ENST00000446317 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
SF3A3P1-201ENST00000446317 C14orf132Q9NPU4 83 aa4.38□□□□□ -1.71
SF3A3P1-201ENST00000446317 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
SF3A3P1-201ENST00000446317 RBM3P98179 157 aaKnown RBP4.37□□□□□ -1.71
SF3A3P1-201ENST00000446317 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
SF3A3P1-201ENST00000446317 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
SF3A3P1-201ENST00000446317 HERC1Q15751 4861 aa4.35□□□□□ -1.71
SF3A3P1-201ENST00000446317 A0A1W2PNM2 257 aa4.35□□□□□ -1.71
SF3A3P1-201ENST00000446317 Q1T7F1 81 aa4.35□□□□□ -1.71
SF3A3P1-201ENST00000446317 SSBP3-AS1Q7Z2R9 100 aa4.34□□□□□ -1.71
SF3A3P1-201ENST00000446317 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
SF3A3P1-201ENST00000446317 IGLV8-61A0A075B6I0 122 aa4.32□□□□□ -1.72
SF3A3P1-201ENST00000446317 A0A087WSZ3 146 aa4.32□□□□□ -1.72
SF3A3P1-201ENST00000446317 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
SF3A3P1-201ENST00000446317 Q6ZVQ6 151 aa4.32□□□□□ -1.72
SF3A3P1-201ENST00000446317 H3BQ85 93 aa4.31□□□□□ -1.72
SF3A3P1-201ENST00000446317 PRR4Q16378 134 aa4.31□□□□□ -1.72
SF3A3P1-201ENST00000446317 Q6ZQT0 140 aa4.31□□□□□ -1.72
SF3A3P1-201ENST00000446317 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
SF3A3P1-201ENST00000446317 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
SF3A3P1-201ENST00000446317 JMJD7-PLA2G4BH0Y9G9 81 aa4.3□□□□□ -1.72
SF3A3P1-201ENST00000446317 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SF3A3P1-201ENST00000446317 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
SF3A3P1-201ENST00000446317 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
SF3A3P1-201ENST00000446317 SPINK1P00995 79 aa4.28□□□□□ -1.72
SF3A3P1-201ENST00000446317 SPAG11AQ6PDA7 123 aa4.28□□□□□ -1.72
SF3A3P1-201ENST00000446317 LPAP08519 4548 aa4.28□□□□□ -1.72
SF3A3P1-201ENST00000446317 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
SF3A3P1-201ENST00000446317 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
SF3A3P1-201ENST00000446317 LCA10Q71F78 164 aa4.27□□□□□ -1.73
SF3A3P1-201ENST00000446317 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
SF3A3P1-201ENST00000446317 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 CXCL6P80162 114 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 LINC00846Q9NV44 126 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
SF3A3P1-201ENST00000446317 A0A087WVE0 104 aa4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 DMBT1Q9UGM3 2413 aaPredicted RBP4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 Q96NJ1 140 aa4.24□□□□□ -1.73
SF3A3P1-201ENST00000446317 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
SF3A3P1-201ENST00000446317 IGKV4-1P06312 121 aa4.23□□□□□ -1.73
SF3A3P1-201ENST00000446317 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
SF3A3P1-201ENST00000446317 NREPQ16612 68 aa4.22□□□□□ -1.73
SF3A3P1-201ENST00000446317 CYP4F30PQ9H0H9 118 aa4.22□□□□□ -1.73
SF3A3P1-201ENST00000446317 PDE6GP18545 87 aa4.21□□□□□ -1.74
SF3A3P1-201ENST00000446317 DSCR10P59022 87 aa4.21□□□□□ -1.74
SF3A3P1-201ENST00000446317 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
SF3A3P1-201ENST00000446317 Q8N9L7 120 aa4.21□□□□□ -1.74
SF3A3P1-201ENST00000446317 hDV103S1A0JD37 113 aa4.2□□□□□ -1.74
SF3A3P1-201ENST00000446317 A8MUN3 132 aa4.2□□□□□ -1.74
SF3A3P1-201ENST00000446317 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
SF3A3P1-201ENST00000446317 RPS29P62273 56 aaKnown RBP4.19□□□□□ -1.74
SF3A3P1-201ENST00000446317 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
SF3A3P1-201ENST00000446317 TMEM254Q8TBM7 123 aa4.19□□□□□ -1.74
SF3A3P1-201ENST00000446317 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
SF3A3P1-201ENST00000446317 BPY2O14599 106 aa4.18□□□□□ -1.74
SF3A3P1-201ENST00000446317 NOTCH2NLQ7Z3S9 236 aa4.18□□□□□ -1.74
SF3A3P1-201ENST00000446317 A6NN06 94 aa4.18□□□□□ -1.74
SF3A3P1-201ENST00000446317 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
SF3A3P1-201ENST00000446317 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SF3A3P1-201ENST00000446317 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
SF3A3P1-201ENST00000446317 LRP2P98164 4655 aa4.16□□□□□ -1.74
SF3A3P1-201ENST00000446317 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
SF3A3P1-201ENST00000446317 K7EQZ3 153 aa4.16□□□□□ -1.74
SF3A3P1-201ENST00000446317 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
SF3A3P1-201ENST00000446317 MP68P56378 58 aa4.14□□□□□ -1.75
SF3A3P1-201ENST00000446317 A0A1B0GVX0 72 aa4.13□□□□□ -1.75
SF3A3P1-201ENST00000446317 A8MWP4 228 aa4.12□□□□□ -1.75
SF3A3P1-201ENST00000446317 NDUFB1O75438 58 aa4.12□□□□□ -1.75
SF3A3P1-201ENST00000446317 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
SF3A3P1-201ENST00000446317 WFDC13Q8IUB5 93 aa4.12□□□□□ -1.75
SF3A3P1-201ENST00000446317 LINC00313P59037 77 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 A0A1B0GW54 56 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 HCG22E2RYF7 251 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 Q5VV11 94 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 Q75L30 129 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 C8orf17Q9NRJ1 99 aa4.11□□□□□ -1.75
SF3A3P1-201ENST00000446317 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms