RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 Q5VV11 94 aa11.29□□□□□ -0.6
PAXBP1-204ENST00000443785 Q8N9P0 234 aaPredicted RBP11.29□□□□□ -0.6
PAXBP1-204ENST00000443785 DNHD1Q96M86 4753 aa11.28□□□□□ -0.6
PAXBP1-204ENST00000443785 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
PAXBP1-204ENST00000443785 ZNF861PO60384 105 aa11.24□□□□□ -0.61
PAXBP1-204ENST00000443785 Q5W150 140 aa11.23□□□□□ -0.61
PAXBP1-204ENST00000443785 SEC61GP60059 68 aa11.22□□□□□ -0.61
PAXBP1-204ENST00000443785 DYNC2H1Q8NCM8 4307 aaKnown RBP11.21□□□□□ -0.62
PAXBP1-204ENST00000443785 A6NED7 52 aa11.2□□□□□ -0.62
PAXBP1-204ENST00000443785 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
PAXBP1-204ENST00000443785 DNAH11Q96DT5 4516 aa11.2□□□□□ -0.62
PAXBP1-204ENST00000443785 SPANXA2-OT1Q8N9U9 137 aa11.19□□□□□ -0.62
PAXBP1-204ENST00000443785 PMAIP1Q13794 54 aa11.18□□□□□ -0.62
PAXBP1-204ENST00000443785 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
PAXBP1-204ENST00000443785 IGLV7-46A0A075B6I9 117 aa11.17□□□□□ -0.62
PAXBP1-204ENST00000443785 H3BPC8 53 aa11.16□□□□□ -0.62
PAXBP1-204ENST00000443785 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
PAXBP1-204ENST00000443785 KRTAP10-2P60368 255 aa11.15□□□□□ -0.62
PAXBP1-204ENST00000443785 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
PAXBP1-204ENST00000443785 ZNF706Q9Y5V0 76 aaPredicted RBP11.15□□□□□ -0.62
PAXBP1-204ENST00000443785 HRES1P13985 223 aa11.13□□□□□ -0.63
PAXBP1-204ENST00000443785 IGLV7-43P04211 117 aa11.12□□□□□ -0.63
PAXBP1-204ENST00000443785 PLAC8Q9NZF1 115 aa11.12□□□□□ -0.63
PAXBP1-204ENST00000443785 Q6ZR54 194 aa11.11□□□□□ -0.63
PAXBP1-204ENST00000443785 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
PAXBP1-204ENST00000443785 LCA10Q71F78 164 aa11.09□□□□□ -0.63
PAXBP1-204ENST00000443785 LIMD2Q9BT23 127 aa11.08□□□□□ -0.64
PAXBP1-204ENST00000443785 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
PAXBP1-204ENST00000443785 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
PAXBP1-204ENST00000443785 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
PAXBP1-204ENST00000443785 SPINK7P58062 85 aa11.04□□□□□ -0.64
PAXBP1-204ENST00000443785 HYDINQ4G0P3 5121 aa11.02□□□□□ -0.65
PAXBP1-204ENST00000443785 DNAH5Q8TE73 4624 aa10.99□□□□□ -0.65
PAXBP1-204ENST00000443785 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.65
PAXBP1-204ENST00000443785 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
PAXBP1-204ENST00000443785 IGKV2D-30A0A075B6S6 120 aa10.95□□□□□ -0.66
PAXBP1-204ENST00000443785 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
PAXBP1-204ENST00000443785 LINC00313P59037 77 aa10.95□□□□□ -0.66
PAXBP1-204ENST00000443785 KRTAP10-1P60331 282 aa10.94□□□□□ -0.66
PAXBP1-204ENST00000443785 Q75L30 129 aa10.92□□□□□ -0.66
PAXBP1-204ENST00000443785 VPS13BQ7Z7G8 4022 aa10.88□□□□□ -0.67
PAXBP1-204ENST00000443785 FAT2Q9NYQ8 4349 aa10.87□□□□□ -0.67
PAXBP1-204ENST00000443785 LINC01558Q9Y6Z2 57 aa10.87□□□□□ -0.67
PAXBP1-204ENST00000443785 KRTAP13-3Q3SY46 172 aa10.85□□□□□ -0.67
PAXBP1-204ENST00000443785 SPINK1P00995 79 aa10.85□□□□□ -0.67
PAXBP1-204ENST00000443785 SSBP3-AS1Q7Z2R9 100 aa10.82□□□□□ -0.68
PAXBP1-204ENST00000443785 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
PAXBP1-204ENST00000443785 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
PAXBP1-204ENST00000443785 ACYP2P14621 99 aa10.8□□□□□ -0.68
PAXBP1-204ENST00000443785 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
PAXBP1-204ENST00000443785 CDC42SE1Q9NRR8 79 aa10.78□□□□□ -0.68
PAXBP1-204ENST00000443785 KTN1-AS1Q86SY8 53 aa10.78□□□□□ -0.68
PAXBP1-204ENST00000443785 ATP11AUNQ6ZP68 121 aa10.76□□□□□ -0.69
PAXBP1-204ENST00000443785 Q8N1X5 172 aa10.74□□□□□ -0.69
PAXBP1-204ENST00000443785 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
PAXBP1-204ENST00000443785 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
PAXBP1-204ENST00000443785 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
PAXBP1-204ENST00000443785 C8orf87E5RJ46 101 aa10.72□□□□□ -0.69
PAXBP1-204ENST00000443785 TYMSOSQ8TAI1 123 aa10.71□□□□□ -0.69
PAXBP1-204ENST00000443785 KRTAP1-4P0C5Y4 121 aa10.71□□□□□ -0.7
PAXBP1-204ENST00000443785 C7orf65Q6ZTY9 151 aa10.7□□□□□ -0.7
PAXBP1-204ENST00000443785 A0A1B0GU69 56 aa10.69□□□□□ -0.7
PAXBP1-204ENST00000443785 A6NN06 94 aa10.69□□□□□ -0.7
PAXBP1-204ENST00000443785 PKD1P98161 4303 aa10.69□□□□□ -0.7
PAXBP1-204ENST00000443785 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
PAXBP1-204ENST00000443785 PRAC1Q96KF2 57 aa10.68□□□□□ -0.7
PAXBP1-204ENST00000443785 FAT1Q14517 4588 aa10.67□□□□□ -0.7
PAXBP1-204ENST00000443785 DMAC1Q96GE9 116 aa10.67□□□□□ -0.7
PAXBP1-204ENST00000443785 ADM2Q7Z4H4 148 aa10.66□□□□□ -0.7
PAXBP1-204ENST00000443785 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.7
PAXBP1-204ENST00000443785 Q6ZSA8 131 aa10.58□□□□□ -0.72
PAXBP1-204ENST00000443785 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
PAXBP1-204ENST00000443785 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
PAXBP1-204ENST00000443785 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
PAXBP1-204ENST00000443785 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
PAXBP1-204ENST00000443785 DYNC1H1Q14204 4646 aaKnown RBP10.42□□□□□ -0.74
PAXBP1-204ENST00000443785 UQCR11O14957 56 aa10.4□□□□□ -0.75
PAXBP1-204ENST00000443785 SACSQ9NZJ4 4579 aa10.38□□□□□ -0.75
PAXBP1-204ENST00000443785 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
PAXBP1-204ENST00000443785 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
PAXBP1-204ENST00000443785 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
PAXBP1-204ENST00000443785 KRTAP3-1Q9BYR8 98 aa10.22□□□□□ -0.77
PAXBP1-204ENST00000443785 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
PAXBP1-204ENST00000443785 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
PAXBP1-204ENST00000443785 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
PAXBP1-204ENST00000443785 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
PAXBP1-204ENST00000443785 H0YAA0 97 aa10.14□□□□□ -0.79
PAXBP1-204ENST00000443785 H3BS24 57 aa10.13□□□□□ -0.79
PAXBP1-204ENST00000443785 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
PAXBP1-204ENST00000443785 A8MUU9 505 aa10.07□□□□□ -0.8
PAXBP1-204ENST00000443785 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
PAXBP1-204ENST00000443785 A0A1B0GU33 70 aa10.06□□□□□ -0.8
PAXBP1-204ENST00000443785 C20orf166-AS1Q96NR2 134 aa10.06□□□□□ -0.8
PAXBP1-204ENST00000443785 HSPG2P98160 4391 aa10.04□□□□□ -0.8
PAXBP1-204ENST00000443785 KRTAP10-4P60372 401 aaPredicted RBP10.04□□□□□ -0.8
PAXBP1-204ENST00000443785 FAT3Q8TDW7 4589 aa9.99□□□□□ -0.81
PAXBP1-204ENST00000443785 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
PAXBP1-204ENST00000443785 A0A0D9SG42 100 aa9.97□□□□□ -0.81
PAXBP1-204ENST00000443785 RYR2Q92736 4967 aa9.95□□□□□ -0.82
PAXBP1-204ENST00000443785 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms