RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 A6NN06 94 aa9.14□□□□□ -0.95
AP1S3-206ENST00000443700 A0A087X002 238 aa9.13□□□□□ -0.95
AP1S3-206ENST00000443700 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
AP1S3-206ENST00000443700 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
AP1S3-206ENST00000443700 ANAPC11Q9NYG5 84 aa9.11□□□□□ -0.95
AP1S3-206ENST00000443700 ACYP2P14621 99 aa9.1□□□□□ -0.95
AP1S3-206ENST00000443700 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
AP1S3-206ENST00000443700 Q5W150 140 aa9.07□□□□□ -0.96
AP1S3-206ENST00000443700 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
AP1S3-206ENST00000443700 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
AP1S3-206ENST00000443700 SPINK7P58062 85 aa9.07□□□□□ -0.96
AP1S3-206ENST00000443700 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
AP1S3-206ENST00000443700 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
AP1S3-206ENST00000443700 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
AP1S3-206ENST00000443700 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
AP1S3-206ENST00000443700 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
AP1S3-206ENST00000443700 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
AP1S3-206ENST00000443700 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.97
AP1S3-206ENST00000443700 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
AP1S3-206ENST00000443700 COL7A1Q02388 2944 aa9.01□□□□□ -0.97
AP1S3-206ENST00000443700 LINC00313P59037 77 aa8.99□□□□□ -0.97
AP1S3-206ENST00000443700 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
AP1S3-206ENST00000443700 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.98
AP1S3-206ENST00000443700 CSMD3Q7Z407 3707 aa8.95□□□□□ -0.98
AP1S3-206ENST00000443700 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
AP1S3-206ENST00000443700 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
AP1S3-206ENST00000443700 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
AP1S3-206ENST00000443700 MGAM2Q2M2H8 2515 aa8.92□□□□□ -0.98
AP1S3-206ENST00000443700 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
AP1S3-206ENST00000443700 A0A1B0GU69 56 aa8.91□□□□□ -0.98
AP1S3-206ENST00000443700 ALMS1Q8TCU4 4167 aa8.89□□□□□ -0.99
AP1S3-206ENST00000443700 HECTD4Q9Y4D8 3996 aa8.89□□□□□ -0.99
AP1S3-206ENST00000443700 DNAH17Q9UFH2 4485 aa8.88□□□□□ -0.99
AP1S3-206ENST00000443700 RETNLBQ9BQ08 111 aa8.84□□□□□ -1
AP1S3-206ENST00000443700 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
AP1S3-206ENST00000443700 SPATA8Q6RVD6 105 aa8.83□□□□□ -1
AP1S3-206ENST00000443700 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
AP1S3-206ENST00000443700 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
AP1S3-206ENST00000443700 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
AP1S3-206ENST00000443700 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
AP1S3-206ENST00000443700 UQCR11O14957 56 aa8.79□□□□□ -1
AP1S3-206ENST00000443700 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
AP1S3-206ENST00000443700 IGKV2D-30A0A075B6S6 120 aa8.76□□□□□ -1.01
AP1S3-206ENST00000443700 PLA2G1BP04054 148 aaKnown RBP8.76□□□□□ -1.01
AP1S3-206ENST00000443700 LY6G6CO95867 125 aa8.73□□□□□ -1.01
AP1S3-206ENST00000443700 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
AP1S3-206ENST00000443700 KRTAP10-2P60368 255 aa8.71□□□□□ -1.01
AP1S3-206ENST00000443700 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.01
AP1S3-206ENST00000443700 Q6ZSA8 131 aa8.71□□□□□ -1.01
AP1S3-206ENST00000443700 FBN3Q75N90 2809 aa8.71□□□□□ -1.02
AP1S3-206ENST00000443700 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
AP1S3-206ENST00000443700 SPINK1P00995 79 aa8.66□□□□□ -1.02
AP1S3-206ENST00000443700 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
AP1S3-206ENST00000443700 KMT2AQ03164 3969 aa8.65□□□□□ -1.03
AP1S3-206ENST00000443700 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
AP1S3-206ENST00000443700 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
AP1S3-206ENST00000443700 MEGF8Q7Z7M0 2845 aa8.63□□□□□ -1.03
AP1S3-206ENST00000443700 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
AP1S3-206ENST00000443700 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
AP1S3-206ENST00000443700 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
AP1S3-206ENST00000443700 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
AP1S3-206ENST00000443700 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
AP1S3-206ENST00000443700 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
AP1S3-206ENST00000443700 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
AP1S3-206ENST00000443700 Q8N1X5 172 aa8.53□□□□□ -1.04
AP1S3-206ENST00000443700 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
AP1S3-206ENST00000443700 TGP01266 2768 aa8.49□□□□□ -1.05
AP1S3-206ENST00000443700 A8MUU9 505 aa8.42□□□□□ -1.06
AP1S3-206ENST00000443700 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
AP1S3-206ENST00000443700 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
AP1S3-206ENST00000443700 PKD1P98161 4303 aa8.4□□□□□ -1.06
AP1S3-206ENST00000443700 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
AP1S3-206ENST00000443700 H0YAA0 97 aa8.38□□□□□ -1.07
AP1S3-206ENST00000443700 A0A1B0GU33 70 aa8.35□□□□□ -1.07
AP1S3-206ENST00000443700 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
AP1S3-206ENST00000443700 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
AP1S3-206ENST00000443700 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
AP1S3-206ENST00000443700 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
AP1S3-206ENST00000443700 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
AP1S3-206ENST00000443700 SACSQ9NZJ4 4579 aa8.27□□□□□ -1.09
AP1S3-206ENST00000443700 K7ERS5 55 aa8.25□□□□□ -1.09
AP1S3-206ENST00000443700 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
AP1S3-206ENST00000443700 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
AP1S3-206ENST00000443700 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
AP1S3-206ENST00000443700 PKHD1L1Q86WI1 4243 aa8.13□□□□□ -1.11
AP1S3-206ENST00000443700 HYDINQ4G0P3 5121 aa8.13□□□□□ -1.11
AP1S3-206ENST00000443700 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
AP1S3-206ENST00000443700 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
AP1S3-206ENST00000443700 APOBP04114 4563 aaKnown RBP8.03□□□□□ -1.12
AP1S3-206ENST00000443700 PKHD1P08F94 4074 aa8.03□□□□□ -1.12
AP1S3-206ENST00000443700 ROMO1P60602 79 aa8.02□□□□□ -1.13
AP1S3-206ENST00000443700 DNHD1Q96M86 4753 aa8.01□□□□□ -1.13
AP1S3-206ENST00000443700 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
AP1S3-206ENST00000443700 H3BS24 57 aa7.97□□□□□ -1.13
AP1S3-206ENST00000443700 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
AP1S3-206ENST00000443700 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
AP1S3-206ENST00000443700 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
AP1S3-206ENST00000443700 S4R3F8 94 aa7.94□□□□□ -1.14
AP1S3-206ENST00000443700 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
AP1S3-206ENST00000443700 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms