RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 COX6B2Q6YFQ2 88 aa11.08□□□□□ -0.64
HNF4A-205ENST00000443598 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
HNF4A-205ENST00000443598 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
HNF4A-205ENST00000443598 C9JAW5 83 aa11.06□□□□□ -0.64
HNF4A-205ENST00000443598 J3QR89 54 aa11.05□□□□□ -0.64
HNF4A-205ENST00000443598 ETDBQ3ZM63 59 aa11.04□□□□□ -0.64
HNF4A-205ENST00000443598 DEFB116Q30KQ4 102 aa11.03□□□□□ -0.64
HNF4A-205ENST00000443598 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
HNF4A-205ENST00000443598 JMJD7-PLA2G4BH0Y9G9 81 aa11.02□□□□□ -0.65
HNF4A-205ENST00000443598 FLGP20930 4061 aaPredicted RBP10.99□□□□□ -0.65
HNF4A-205ENST00000443598 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
HNF4A-205ENST00000443598 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
HNF4A-205ENST00000443598 A0A1B0GW54 56 aa10.98□□□□□ -0.65
HNF4A-205ENST00000443598 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
HNF4A-205ENST00000443598 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
HNF4A-205ENST00000443598 J3KT08 172 aa10.97□□□□□ -0.65
HNF4A-205ENST00000443598 Q6ZQT0 140 aa10.97□□□□□ -0.65
HNF4A-205ENST00000443598 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.65
HNF4A-205ENST00000443598 PDE6GP18545 87 aa10.96□□□□□ -0.65
HNF4A-205ENST00000443598 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
HNF4A-205ENST00000443598 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
HNF4A-205ENST00000443598 M0R2T5 61 aa10.95□□□□□ -0.66
HNF4A-205ENST00000443598 PCP4P48539 62 aa10.94□□□□□ -0.66
HNF4A-205ENST00000443598 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
HNF4A-205ENST00000443598 KRTAP10-6P60371 365 aaPredicted RBP10.93□□□□□ -0.66
HNF4A-205ENST00000443598 H3BT86 120 aa10.9□□□□□ -0.66
HNF4A-205ENST00000443598 C14orf132Q9NPU4 83 aa10.87□□□□□ -0.67
HNF4A-205ENST00000443598 NDUFB1O75438 58 aa10.86□□□□□ -0.67
HNF4A-205ENST00000443598 KRTAP9-6A0A140TA67 174 aa10.84□□□□□ -0.67
HNF4A-205ENST00000443598 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
HNF4A-205ENST00000443598 A8MWP4 228 aa10.8□□□□□ -0.68
HNF4A-205ENST00000443598 NREPQ16612 68 aa10.76□□□□□ -0.69
HNF4A-205ENST00000443598 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
HNF4A-205ENST00000443598 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
HNF4A-205ENST00000443598 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
HNF4A-205ENST00000443598 MPLKIPQ8TAP9 179 aa10.74□□□□□ -0.69
HNF4A-205ENST00000443598 ZCCHC13Q8WW36 166 aaKnown RBP10.74□□□□□ -0.69
HNF4A-205ENST00000443598 HRES1P13985 223 aa10.73□□□□□ -0.69
HNF4A-205ENST00000443598 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
HNF4A-205ENST00000443598 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
HNF4A-205ENST00000443598 PRR15Q8IV56 129 aa10.7□□□□□ -0.7
HNF4A-205ENST00000443598 FAM236DA0A1B0GTK5 79 aa10.69□□□□□ -0.7
HNF4A-205ENST00000443598 FAM236CP0DP71 79 aa10.69□□□□□ -0.7
HNF4A-205ENST00000443598 Q6ZVQ6 151 aa10.66□□□□□ -0.7
HNF4A-205ENST00000443598 MT-ATP8P03928 68 aa10.66□□□□□ -0.7
HNF4A-205ENST00000443598 CRCT1Q9UGL9 99 aa10.64□□□□□ -0.71
HNF4A-205ENST00000443598 ACYP1P07311 99 aa10.63□□□□□ -0.71
HNF4A-205ENST00000443598 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
HNF4A-205ENST00000443598 SPINK7P58062 85 aa10.62□□□□□ -0.71
HNF4A-205ENST00000443598 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
HNF4A-205ENST00000443598 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
HNF4A-205ENST00000443598 MRPL34Q9BQ48 92 aaKnown RBP10.58□□□□□ -0.72
HNF4A-205ENST00000443598 K7EQZ3 153 aa10.57□□□□□ -0.72
HNF4A-205ENST00000443598 KRTAP9-8Q9BYQ0 159 aa10.57□□□□□ -0.72
HNF4A-205ENST00000443598 BPY2O14599 106 aa10.56□□□□□ -0.72
HNF4A-205ENST00000443598 hDV103S1A0JD37 113 aa10.55□□□□□ -0.72
HNF4A-205ENST00000443598 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
HNF4A-205ENST00000443598 IMUPQ9GZP8 106 aa10.47□□□□□ -0.73
HNF4A-205ENST00000443598 NDUFS5O43920 106 aa10.45□□□□□ -0.74
HNF4A-205ENST00000443598 WFDC13Q8IUB5 93 aa10.45□□□□□ -0.74
HNF4A-205ENST00000443598 MT2AP02795 61 aa10.42□□□□□ -0.74
HNF4A-205ENST00000443598 Q8N9L7 120 aa10.4□□□□□ -0.74
HNF4A-205ENST00000443598 UBL5Q9BZL1 73 aa10.4□□□□□ -0.74
HNF4A-205ENST00000443598 CASC2Q6XLA1 102 aa10.4□□□□□ -0.75
HNF4A-205ENST00000443598 LINC00846Q9NV44 126 aa10.4□□□□□ -0.75
HNF4A-205ENST00000443598 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
HNF4A-205ENST00000443598 Q5W150 140 aa10.34□□□□□ -0.75
HNF4A-205ENST00000443598 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
HNF4A-205ENST00000443598 MT1FP04733 61 aa10.33□□□□□ -0.76
HNF4A-205ENST00000443598 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
HNF4A-205ENST00000443598 CXCL6P80162 114 aa10.3□□□□□ -0.76
HNF4A-205ENST00000443598 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
HNF4A-205ENST00000443598 IGKV2-30P06310 120 aa10.29□□□□□ -0.76
HNF4A-205ENST00000443598 KRTAP10-10P60014 251 aa10.29□□□□□ -0.76
HNF4A-205ENST00000443598 ATP5EP2Q5VTU8 51 aa10.27□□□□□ -0.77
HNF4A-205ENST00000443598 HIST1H4AP62805 103 aaKnown RBP10.26□□□□□ -0.77
HNF4A-205ENST00000443598 H1FX-AS1Q4G0G2 97 aa10.26□□□□□ -0.77
HNF4A-205ENST00000443598 USH2AO75445 5202 aa10.26□□□□□ -0.77
HNF4A-205ENST00000443598 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
HNF4A-205ENST00000443598 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
HNF4A-205ENST00000443598 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
HNF4A-205ENST00000443598 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
HNF4A-205ENST00000443598 ATOX1O00244 68 aa10.15□□□□□ -0.78
HNF4A-205ENST00000443598 LCE2BO14633 110 aa10.15□□□□□ -0.78
HNF4A-205ENST00000443598 SSPOA2VEC9 5147 aa10.15□□□□□ -0.78
HNF4A-205ENST00000443598 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
HNF4A-205ENST00000443598 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
HNF4A-205ENST00000443598 UQCRQO14949 82 aa10.1□□□□□ -0.79
HNF4A-205ENST00000443598 COX7CP15954 63 aa10.07□□□□□ -0.8
HNF4A-205ENST00000443598 A0A087WVE0 104 aa10.06□□□□□ -0.8
HNF4A-205ENST00000443598 SERP2Q8N6R1 65 aa10.03□□□□□ -0.8
HNF4A-205ENST00000443598 KRTAP3-1Q9BYR8 98 aa9.97□□□□□ -0.81
HNF4A-205ENST00000443598 KRTAP19-1Q8IUB9 90 aa9.96□□□□□ -0.82
HNF4A-205ENST00000443598 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
HNF4A-205ENST00000443598 SMIM20Q8N5G0 67 aa9.93□□□□□ -0.82
HNF4A-205ENST00000443598 FCGBPQ9Y6R7 5405 aaPredicted RBP9.91□□□□□ -0.82
HNF4A-205ENST00000443598 S4R3F8 94 aa9.9□□□□□ -0.82
HNF4A-205ENST00000443598 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
HNF4A-205ENST00000443598 TRAV7A0A075B6U4 112 aa9.89□□□□□ -0.83
HNF4A-205ENST00000443598 TRAV22A0A0B4J277 110 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms