RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 NOTCH2NLQ7Z3S9 236 aa3.52□□□□□ -1.85
RFX3-206ENST00000442560 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
RFX3-206ENST00000442560 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
RFX3-206ENST00000442560 A0A0B4J2C4 111 aa3.5□□□□□ -1.85
RFX3-206ENST00000442560 A0A1B0GV72 72 aa3.5□□□□□ -1.85
RFX3-206ENST00000442560 A0A1B0GX51 115 aa3.5□□□□□ -1.85
RFX3-206ENST00000442560 DLEU1O43261 78 aa3.5□□□□□ -1.85
RFX3-206ENST00000442560 C14orf144Q96I85 54 aa3.5□□□□□ -1.85
RFX3-206ENST00000442560 S100A6P06703 90 aa3.49□□□□□ -1.85
RFX3-206ENST00000442560 ANKRD29Q8N6D5 301 aa3.49□□□□□ -1.85
RFX3-206ENST00000442560 IGHV6-1A0A0B4J1U7 121 aa3.48□□□□□ -1.85
RFX3-206ENST00000442560 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
RFX3-206ENST00000442560 HIGD1BQ9P298 99 aa3.48□□□□□ -1.85
RFX3-206ENST00000442560 C2orf91Q6ZV80 131 aa3.47□□□□□ -1.85
RFX3-206ENST00000442560 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
RFX3-206ENST00000442560 PRO1854Q9UHT4 67 aa3.47□□□□□ -1.85
RFX3-206ENST00000442560 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
RFX3-206ENST00000442560 TRIAP1O43715 76 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 TRACP01848 142 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 SPATA45Q537H7 98 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 CEND1Q8N111 149 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 MTURNQ8N3F0 131 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 PAM16Q9Y3D7 125 aa3.46□□□□□ -1.86
RFX3-206ENST00000442560 DNAL4O96015 105 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 CCKP06307 115 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 FXYD2P54710 66 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 LINC00846Q9NV44 126 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
RFX3-206ENST00000442560 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
RFX3-206ENST00000442560 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
RFX3-206ENST00000442560 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
RFX3-206ENST00000442560 A0A1B0GVX0 72 aa3.43□□□□□ -1.86
RFX3-206ENST00000442560 TMEM256-PLSCR3K7ERE1 68 aa3.43□□□□□ -1.86
RFX3-206ENST00000442560 PSMB2P49721 201 aa3.43□□□□□ -1.86
RFX3-206ENST00000442560 SPINK7P58062 85 aa3.43□□□□□ -1.86
RFX3-206ENST00000442560 ZCCHC13Q8WW36 166 aaKnown RBP3.43□□□□□ -1.86
RFX3-206ENST00000442560 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
RFX3-206ENST00000442560 H3BQ85 93 aa3.42□□□□□ -1.86
RFX3-206ENST00000442560 VAMP8Q9BV40 100 aa3.42□□□□□ -1.86
RFX3-206ENST00000442560 A8MWP4 228 aa3.41□□□□□ -1.86
RFX3-206ENST00000442560 K7ERJ3 54 aa3.41□□□□□ -1.86
RFX3-206ENST00000442560 IGKV2-30P06310 120 aa3.41□□□□□ -1.86
RFX3-206ENST00000442560 S100A1P23297 94 aa3.41□□□□□ -1.86
RFX3-206ENST00000442560 COX6CP09669 75 aa3.4□□□□□ -1.87
RFX3-206ENST00000442560 UBE2V1Q13404 147 aa3.4□□□□□ -1.87
RFX3-206ENST00000442560 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
RFX3-206ENST00000442560 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
RFX3-206ENST00000442560 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
RFX3-206ENST00000442560 J3KT08 172 aa3.38□□□□□ -1.87
RFX3-206ENST00000442560 LYRM7Q5U5X0 104 aa3.38□□□□□ -1.87
RFX3-206ENST00000442560 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
RFX3-206ENST00000442560 NDUFB1O75438 58 aa3.37□□□□□ -1.87
RFX3-206ENST00000442560 HSD52Q0P140 79 aa3.37□□□□□ -1.87
RFX3-206ENST00000442560 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
RFX3-206ENST00000442560 C9JAW5 83 aa3.36□□□□□ -1.87
RFX3-206ENST00000442560 SCGB1C2P0DMR2 95 aa3.36□□□□□ -1.87
RFX3-206ENST00000442560 Q6ZQT0 140 aa3.36□□□□□ -1.87
RFX3-206ENST00000442560 C8orf17Q9NRJ1 99 aa3.36□□□□□ -1.87
RFX3-206ENST00000442560 IGKV3D-7A0A0C4DH55 119 aa3.34□□□□□ -1.87
RFX3-206ENST00000442560 BAALC-AS2P0C853 105 aa3.34□□□□□ -1.87
RFX3-206ENST00000442560 C21orf62-AS1Q17RA5 79 aa3.34□□□□□ -1.87
RFX3-206ENST00000442560 Q6ZVQ6 151 aa3.33□□□□□ -1.88
RFX3-206ENST00000442560 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
RFX3-206ENST00000442560 PYY3Q5JQD4 70 aa3.31□□□□□ -1.88
RFX3-206ENST00000442560 PRR15Q8IV56 129 aa3.3□□□□□ -1.88
RFX3-206ENST00000442560 MRPL34Q9BQ48 92 aaKnown RBP3.3□□□□□ -1.88
RFX3-206ENST00000442560 UQCR10Q9UDW1 63 aa3.3□□□□□ -1.88
RFX3-206ENST00000442560 MMP24-AS1A0A0U1RRL7 71 aa3.29□□□□□ -1.88
RFX3-206ENST00000442560 JMJD7-PLA2G4BH0Y9G9 81 aa3.29□□□□□ -1.88
RFX3-206ENST00000442560 TMEM254Q8TBM7 123 aa3.29□□□□□ -1.88
RFX3-206ENST00000442560 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
RFX3-206ENST00000442560 A0A1B0GW54 56 aa3.28□□□□□ -1.88
RFX3-206ENST00000442560 NDUFS5O43920 106 aa3.28□□□□□ -1.88
RFX3-206ENST00000442560 NREPQ16612 68 aa3.28□□□□□ -1.88
RFX3-206ENST00000442560 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
RFX3-206ENST00000442560 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
RFX3-206ENST00000442560 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
RFX3-206ENST00000442560 ATXN8Q156A1 80 aa3.27□□□□□ -1.89
RFX3-206ENST00000442560 C14orf132Q9NPU4 83 aa3.27□□□□□ -1.89
RFX3-206ENST00000442560 NEBP20929 6669 aa3.26□□□□□ -1.89
RFX3-206ENST00000442560 hDV103S1A0JD37 113 aa3.26□□□□□ -1.89
RFX3-206ENST00000442560 PDE6GP18545 87 aa3.26□□□□□ -1.89
RFX3-206ENST00000442560 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
RFX3-206ENST00000442560 A6NN06 94 aa3.25□□□□□ -1.89
RFX3-206ENST00000442560 K7EQZ3 153 aa3.25□□□□□ -1.89
RFX3-206ENST00000442560 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
RFX3-206ENST00000442560 Q5W150 140 aa3.24□□□□□ -1.89
RFX3-206ENST00000442560 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
RFX3-206ENST00000442560 C7orf65Q6ZTY9 151 aa3.24□□□□□ -1.89
RFX3-206ENST00000442560 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
RFX3-206ENST00000442560 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
RFX3-206ENST00000442560 MT1BP07438 61 aa3.23□□□□□ -1.89
RFX3-206ENST00000442560 C4orf26Q17RF5 130 aa3.23□□□□□ -1.89
RFX3-206ENST00000442560 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
RFX3-206ENST00000442560 Q5VV11 94 aa3.21□□□□□ -1.9
RFX3-206ENST00000442560 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
RFX3-206ENST00000442560 M0R143 59 aa3.2□□□□□ -1.9
RFX3-206ENST00000442560 BPY2O14599 106 aa3.2□□□□□ -1.9
RFX3-206ENST00000442560 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms