RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
SNX17-203ENST00000440760 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
SNX17-203ENST00000440760 SPINK1P00995 79 aa10.93□□□□□ -0.66
SNX17-203ENST00000440760 KRTAP4-5Q9BYR2 181 aa10.93□□□□□ -0.66
SNX17-203ENST00000440760 A8MWP4 228 aa10.92□□□□□ -0.66
SNX17-203ENST00000440760 LIMD2Q9BT23 127 aa10.92□□□□□ -0.66
SNX17-203ENST00000440760 KLKP1Q107X0 134 aa10.91□□□□□ -0.66
SNX17-203ENST00000440760 Q5XG85 94 aa10.91□□□□□ -0.66
SNX17-203ENST00000440760 OXTP01178 125 aa10.9□□□□□ -0.66
SNX17-203ENST00000440760 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.66
SNX17-203ENST00000440760 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
SNX17-203ENST00000440760 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
SNX17-203ENST00000440760 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
SNX17-203ENST00000440760 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
SNX17-203ENST00000440760 H7BZZ5 65 aa10.87□□□□□ -0.67
SNX17-203ENST00000440760 SPAG11AQ6PDA7 123 aa10.87□□□□□ -0.67
SNX17-203ENST00000440760 HERC2O95714 4834 aa10.87□□□□□ -0.67
SNX17-203ENST00000440760 ABCA13Q86UQ4 5058 aa10.86□□□□□ -0.67
SNX17-203ENST00000440760 KRTAP10-8P60410 259 aa10.85□□□□□ -0.67
SNX17-203ENST00000440760 SERP1Q9Y6X1 66 aa10.85□□□□□ -0.67
SNX17-203ENST00000440760 IGHV6-1A0A0B4J1U7 121 aa10.84□□□□□ -0.67
SNX17-203ENST00000440760 NDUFB1O75438 58 aa10.84□□□□□ -0.67
SNX17-203ENST00000440760 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
SNX17-203ENST00000440760 NDUFC1O43677 76 aa10.83□□□□□ -0.68
SNX17-203ENST00000440760 HCG22E2RYF7 251 aa10.83□□□□□ -0.68
SNX17-203ENST00000440760 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
SNX17-203ENST00000440760 A0A1B0GVX0 72 aa10.82□□□□□ -0.68
SNX17-203ENST00000440760 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
SNX17-203ENST00000440760 NOTCH2NLQ7Z3S9 236 aa10.79□□□□□ -0.68
SNX17-203ENST00000440760 MT1HL1P0DM35 61 aa10.78□□□□□ -0.68
SNX17-203ENST00000440760 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
SNX17-203ENST00000440760 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.69
SNX17-203ENST00000440760 ATP5EP56381 51 aaPredicted RBP10.76□□□□□ -0.69
SNX17-203ENST00000440760 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
SNX17-203ENST00000440760 CASC2Q6XLA1 102 aa10.76□□□□□ -0.69
SNX17-203ENST00000440760 KRTAP29-1A8MX34 341 aaPredicted RBP10.75□□□□□ -0.69
SNX17-203ENST00000440760 SNURFQ9Y675 71 aa10.74□□□□□ -0.69
SNX17-203ENST00000440760 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
SNX17-203ENST00000440760 hDV103S1A0JD37 113 aa10.71□□□□□ -0.69
SNX17-203ENST00000440760 SMIM26A0A096LP01 95 aa10.69□□□□□ -0.7
SNX17-203ENST00000440760 TMEM254Q8TBM7 123 aa10.69□□□□□ -0.7
SNX17-203ENST00000440760 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
SNX17-203ENST00000440760 C8orf87E5RJ46 101 aa10.64□□□□□ -0.71
SNX17-203ENST00000440760 LINC00313P59037 77 aa10.64□□□□□ -0.71
SNX17-203ENST00000440760 A0A0U1RQV1 116 aa10.63□□□□□ -0.71
SNX17-203ENST00000440760 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
SNX17-203ENST00000440760 NDUFS5O43920 106 aa10.59□□□□□ -0.71
SNX17-203ENST00000440760 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
SNX17-203ENST00000440760 C9orf92A6NGG3 77 aa10.57□□□□□ -0.72
SNX17-203ENST00000440760 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
SNX17-203ENST00000440760 PRO0628Q9UI54 55 aa10.51□□□□□ -0.73
SNX17-203ENST00000440760 PCLOQ9Y6V0 5065 aa10.48□□□□□ -0.73
SNX17-203ENST00000440760 J3QL48 77 aa10.48□□□□□ -0.73
SNX17-203ENST00000440760 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
SNX17-203ENST00000440760 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
SNX17-203ENST00000440760 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
SNX17-203ENST00000440760 H0Y9P7 68 aa10.45□□□□□ -0.74
SNX17-203ENST00000440760 TRAV22A0A0B4J277 110 aa10.43□□□□□ -0.74
SNX17-203ENST00000440760 PRR4Q16378 134 aa10.43□□□□□ -0.74
SNX17-203ENST00000440760 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
SNX17-203ENST00000440760 Q5W150 140 aa10.43□□□□□ -0.74
SNX17-203ENST00000440760 MP68P56378 58 aa10.39□□□□□ -0.75
SNX17-203ENST00000440760 LINC00208Q96KT6 92 aa10.38□□□□□ -0.75
SNX17-203ENST00000440760 KRTAP13-3Q3SY46 172 aa10.37□□□□□ -0.75
SNX17-203ENST00000440760 C20orf166-AS1Q96NR2 134 aa10.35□□□□□ -0.75
SNX17-203ENST00000440760 A8MUU9 505 aa10.34□□□□□ -0.75
SNX17-203ENST00000440760 LPAP08519 4548 aa10.33□□□□□ -0.76
SNX17-203ENST00000440760 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
SNX17-203ENST00000440760 MPLKIPQ8TAP9 179 aa10.32□□□□□ -0.76
SNX17-203ENST00000440760 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
SNX17-203ENST00000440760 XP32Q5T750 250 aa10.29□□□□□ -0.76
SNX17-203ENST00000440760 Q1T7F1 81 aa10.28□□□□□ -0.76
SNX17-203ENST00000440760 H3BPC8 53 aa10.27□□□□□ -0.77
SNX17-203ENST00000440760 BRK1Q8WUW1 75 aa10.27□□□□□ -0.77
SNX17-203ENST00000440760 Q75L30 129 aa10.26□□□□□ -0.77
SNX17-203ENST00000440760 HERC1Q15751 4861 aa10.25□□□□□ -0.77
SNX17-203ENST00000440760 TPRXLQ17RH7 258 aa10.24□□□□□ -0.77
SNX17-203ENST00000440760 LRP2P98164 4655 aa10.22□□□□□ -0.77
SNX17-203ENST00000440760 PCOTHQ58A44 107 aa10.21□□□□□ -0.78
SNX17-203ENST00000440760 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
SNX17-203ENST00000440760 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
SNX17-203ENST00000440760 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
SNX17-203ENST00000440760 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
SNX17-203ENST00000440760 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
SNX17-203ENST00000440760 V9GYY9 64 aa10.16□□□□□ -0.78
SNX17-203ENST00000440760 ATP11AUNQ6ZP68 121 aa10.12□□□□□ -0.79
SNX17-203ENST00000440760 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
SNX17-203ENST00000440760 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
SNX17-203ENST00000440760 HRES1P13985 223 aa10.03□□□□□ -0.8
SNX17-203ENST00000440760 SPINK7P58062 85 aa10.03□□□□□ -0.8
SNX17-203ENST00000440760 PSPHP1O15172 72 aa10.02□□□□□ -0.81
SNX17-203ENST00000440760 A8MUN3 132 aa9.97□□□□□ -0.81
SNX17-203ENST00000440760 Q5VV11 94 aa9.95□□□□□ -0.82
SNX17-203ENST00000440760 MUC17Q685J3 4493 aa9.89□□□□□ -0.83
SNX17-203ENST00000440760 COA5Q86WW8 74 aa9.89□□□□□ -0.83
SNX17-203ENST00000440760 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
SNX17-203ENST00000440760 SEC61BP60468 96 aaKnown RBP9.86□□□□□ -0.83
SNX17-203ENST00000440760 CHKB-CPT1BH3BT56 60 aa9.84□□□□□ -0.83
SNX17-203ENST00000440760 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
SNX17-203ENST00000440760 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms