RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 Q96NJ1 140 aa12.57□□□□□ -0.4
CDKN1C-204ENST00000440480 A0A0U1RQV1 116 aa12.56□□□□□ -0.4
CDKN1C-204ENST00000440480 KRTAP29-1A8MX34 341 aaPredicted RBP12.56□□□□□ -0.4
CDKN1C-204ENST00000440480 KRTAP13-2Q52LG2 175 aa12.55□□□□□ -0.4
CDKN1C-204ENST00000440480 RPS28P62857 69 aaKnown RBP12.54□□□□□ -0.4
CDKN1C-204ENST00000440480 FAM236DA0A1B0GTK5 79 aa12.53□□□□□ -0.4
CDKN1C-204ENST00000440480 FAM236CP0DP71 79 aa12.53□□□□□ -0.4
CDKN1C-204ENST00000440480 PRR26Q8N8Z3 221 aa12.51□□□□□ -0.41
CDKN1C-204ENST00000440480 TYMSOSQ8TAI1 123 aa12.5□□□□□ -0.41
CDKN1C-204ENST00000440480 ATP5EP56381 51 aaPredicted RBP12.49□□□□□ -0.41
CDKN1C-204ENST00000440480 MMP24-AS1A0A0U1RRL7 71 aa12.48□□□□□ -0.41
CDKN1C-204ENST00000440480 hDV103S1A0JD37 113 aa12.47□□□□□ -0.41
CDKN1C-204ENST00000440480 MP68P56378 58 aa12.47□□□□□ -0.41
CDKN1C-204ENST00000440480 KRTAP4-5Q9BYR2 181 aa12.47□□□□□ -0.41
CDKN1C-204ENST00000440480 A0A1B0GVX0 72 aa12.46□□□□□ -0.41
CDKN1C-204ENST00000440480 ABCA13Q86UQ4 5058 aa12.45□□□□□ -0.42
CDKN1C-204ENST00000440480 ASB16-AS1Q495Z4 193 aa12.45□□□□□ -0.42
CDKN1C-204ENST00000440480 C8orf17Q9NRJ1 99 aa12.44□□□□□ -0.42
CDKN1C-204ENST00000440480 H3BPC8 53 aa12.41□□□□□ -0.42
CDKN1C-204ENST00000440480 IGHV6-1A0A0B4J1U7 121 aa12.41□□□□□ -0.42
CDKN1C-204ENST00000440480 TP53AIP1Q9HCN2 124 aa12.4□□□□□ -0.42
CDKN1C-204ENST00000440480 PKHD1L1Q86WI1 4243 aa12.39□□□□□ -0.43
CDKN1C-204ENST00000440480 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
CDKN1C-204ENST00000440480 ZCCHC13Q8WW36 166 aaKnown RBP12.39□□□□□ -0.43
CDKN1C-204ENST00000440480 Q5XG85 94 aa12.37□□□□□ -0.43
CDKN1C-204ENST00000440480 SERP1Q9Y6X1 66 aa12.37□□□□□ -0.43
CDKN1C-204ENST00000440480 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
CDKN1C-204ENST00000440480 H0Y9P7 68 aa12.34□□□□□ -0.43
CDKN1C-204ENST00000440480 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
CDKN1C-204ENST00000440480 LINC00304Q8N9R0 145 aa12.34□□□□□ -0.43
CDKN1C-204ENST00000440480 SPAG11AQ6PDA7 123 aa12.32□□□□□ -0.44
CDKN1C-204ENST00000440480 MRPL34Q9BQ48 92 aaKnown RBP12.32□□□□□ -0.44
CDKN1C-204ENST00000440480 SPINK1P00995 79 aa12.31□□□□□ -0.44
CDKN1C-204ENST00000440480 LINC00208Q96KT6 92 aa12.31□□□□□ -0.44
CDKN1C-204ENST00000440480 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
CDKN1C-204ENST00000440480 TRAV22A0A0B4J277 110 aa12.3□□□□□ -0.44
CDKN1C-204ENST00000440480 C8orf87E5RJ46 101 aa12.3□□□□□ -0.44
CDKN1C-204ENST00000440480 KRTAP10-8P60410 259 aa12.3□□□□□ -0.44
CDKN1C-204ENST00000440480 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
CDKN1C-204ENST00000440480 FLG2Q5D862 2391 aaPredicted RBP12.29□□□□□ -0.44
CDKN1C-204ENST00000440480 NDUFS5O43920 106 aa12.27□□□□□ -0.45
CDKN1C-204ENST00000440480 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
CDKN1C-204ENST00000440480 OXTP01178 125 aa12.23□□□□□ -0.45
CDKN1C-204ENST00000440480 C1orf195Q5TG92 126 aa12.22□□□□□ -0.45
CDKN1C-204ENST00000440480 RPS29P62273 56 aaKnown RBP12.21□□□□□ -0.45
CDKN1C-204ENST00000440480 FAT3Q8TDW7 4589 aa12.2□□□□□ -0.46
CDKN1C-204ENST00000440480 NOTCH2NLQ7Z3S9 236 aa12.19□□□□□ -0.46
CDKN1C-204ENST00000440480 LINC00313P59037 77 aa12.18□□□□□ -0.46
CDKN1C-204ENST00000440480 TNXBP22105 4242 aa12.17□□□□□ -0.46
CDKN1C-204ENST00000440480 MT1HL1P0DM35 61 aa12.16□□□□□ -0.46
CDKN1C-204ENST00000440480 SPANXA2-OT1Q8N9U9 137 aa12.14□□□□□ -0.47
CDKN1C-204ENST00000440480 CYP4F30PQ9H0H9 118 aa12.14□□□□□ -0.47
CDKN1C-204ENST00000440480 SMIM26A0A096LP01 95 aa12.11□□□□□ -0.47
CDKN1C-204ENST00000440480 DMBT1Q9UGM3 2413 aaPredicted RBP12.04□□□□□ -0.48
CDKN1C-204ENST00000440480 LOC101927531A0A1B0GV80 90 aa12.04□□□□□ -0.48
CDKN1C-204ENST00000440480 Q8N9P0 234 aaPredicted RBP12.04□□□□□ -0.48
CDKN1C-204ENST00000440480 J3QL48 77 aa12.01□□□□□ -0.49
CDKN1C-204ENST00000440480 PRR4Q16378 134 aa12□□□□□ -0.49
CDKN1C-204ENST00000440480 RETNLBQ9BQ08 111 aa11.99□□□□□ -0.49
CDKN1C-204ENST00000440480 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
CDKN1C-204ENST00000440480 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
CDKN1C-204ENST00000440480 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
CDKN1C-204ENST00000440480 KRTAP16-1A8MUX0 517 aa11.95□□□□□ -0.5
CDKN1C-204ENST00000440480 Q5W150 140 aa11.95□□□□□ -0.5
CDKN1C-204ENST00000440480 FP248Q71RG6 208 aaPredicted RBP11.9□□□□□ -0.5
CDKN1C-204ENST00000440480 HERC1Q15751 4861 aa11.87□□□□□ -0.51
CDKN1C-204ENST00000440480 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
CDKN1C-204ENST00000440480 IGKV2-30P06310 120 aa11.79□□□□□ -0.52
CDKN1C-204ENST00000440480 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
CDKN1C-204ENST00000440480 V9GYY9 64 aa11.76□□□□□ -0.53
CDKN1C-204ENST00000440480 Q1T7F1 81 aa11.76□□□□□ -0.53
CDKN1C-204ENST00000440480 COA5Q86WW8 74 aa11.76□□□□□ -0.53
CDKN1C-204ENST00000440480 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
CDKN1C-204ENST00000440480 HRES1P13985 223 aa11.69□□□□□ -0.54
CDKN1C-204ENST00000440480 ACYP2P14621 99 aa11.67□□□□□ -0.54
CDKN1C-204ENST00000440480 IGKV2D-30A0A075B6S6 120 aa11.65□□□□□ -0.54
CDKN1C-204ENST00000440480 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
CDKN1C-204ENST00000440480 C20orf166-AS1Q96NR2 134 aa11.64□□□□□ -0.55
CDKN1C-204ENST00000440480 A8MUU9 505 aa11.63□□□□□ -0.55
CDKN1C-204ENST00000440480 DMAC1Q96GE9 116 aa11.62□□□□□ -0.55
CDKN1C-204ENST00000440480 C7orf65Q6ZTY9 151 aa11.6□□□□□ -0.55
CDKN1C-204ENST00000440480 TPRXLQ17RH7 258 aa11.6□□□□□ -0.55
CDKN1C-204ENST00000440480 HMCN2Q8NDA2 5059 aa11.54□□□□□ -0.56
CDKN1C-204ENST00000440480 XP32Q5T750 250 aa11.52□□□□□ -0.57
CDKN1C-204ENST00000440480 CHKB-CPT1BH3BT56 60 aa11.51□□□□□ -0.57
CDKN1C-204ENST00000440480 Q75L30 129 aa11.5□□□□□ -0.57
CDKN1C-204ENST00000440480 PSPHP1O15172 72 aa11.49□□□□□ -0.57
CDKN1C-204ENST00000440480 A8MUN3 132 aa11.44□□□□□ -0.58
CDKN1C-204ENST00000440480 LINC01558Q9Y6Z2 57 aa11.44□□□□□ -0.58
CDKN1C-204ENST00000440480 LPAP08519 4548 aa11.44□□□□□ -0.58
CDKN1C-204ENST00000440480 RPL37P61927 97 aaKnown RBP11.42□□□□□ -0.58
CDKN1C-204ENST00000440480 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
CDKN1C-204ENST00000440480 PRR15LQ9BU68 103 aa11.42□□□□□ -0.58
CDKN1C-204ENST00000440480 ATP11AUNQ6ZP68 121 aa11.4□□□□□ -0.58
CDKN1C-204ENST00000440480 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
CDKN1C-204ENST00000440480 Q5VV11 94 aa11.37□□□□□ -0.59
CDKN1C-204ENST00000440480 PRO0628Q9UI54 55 aa11.37□□□□□ -0.59
CDKN1C-204ENST00000440480 LRP2P98164 4655 aa11.33□□□□□ -0.6
CDKN1C-204ENST00000440480 SPINK7P58062 85 aa11.33□□□□□ -0.6
CDKN1C-204ENST00000440480 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms