RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
PCNX1-202ENST00000439984 NF1P21359 2839 aa8.74□□□□□ -1.01
PCNX1-202ENST00000439984 A0A087X002 238 aa8.73□□□□□ -1.01
PCNX1-202ENST00000439984 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
PCNX1-202ENST00000439984 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
PCNX1-202ENST00000439984 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
PCNX1-202ENST00000439984 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
PCNX1-202ENST00000439984 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
PCNX1-202ENST00000439984 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
PCNX1-202ENST00000439984 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
PCNX1-202ENST00000439984 MXRA5Q9NR99 2828 aa8.63□□□□□ -1.03
PCNX1-202ENST00000439984 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
PCNX1-202ENST00000439984 S4R3F8 94 aa8.62□□□□□ -1.03
PCNX1-202ENST00000439984 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
PCNX1-202ENST00000439984 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
PCNX1-202ENST00000439984 HIVEP1P15822 2718 aa8.6□□□□□ -1.03
PCNX1-202ENST00000439984 SVEP1Q4LDE5 3571 aa8.59□□□□□ -1.03
PCNX1-202ENST00000439984 PLAC8Q9NZF1 115 aa8.58□□□□□ -1.04
PCNX1-202ENST00000439984 CELSR1Q9NYQ6 3014 aa8.58□□□□□ -1.04
PCNX1-202ENST00000439984 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
PCNX1-202ENST00000439984 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
PCNX1-202ENST00000439984 PANO1I0J062 215 aa8.54□□□□□ -1.04
PCNX1-202ENST00000439984 KRTAP11-1Q8IUC1 163 aa8.52□□□□□ -1.04
PCNX1-202ENST00000439984 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
PCNX1-202ENST00000439984 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
PCNX1-202ENST00000439984 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
PCNX1-202ENST00000439984 A8MUU9 505 aa8.49□□□□□ -1.05
PCNX1-202ENST00000439984 Q6ZSA8 131 aa8.45□□□□□ -1.06
PCNX1-202ENST00000439984 SPENQ96T58 3664 aaKnown RBP8.45□□□□□ -1.06
PCNX1-202ENST00000439984 R4GN34 69 aa8.44□□□□□ -1.06
PCNX1-202ENST00000439984 BSNQ9UPA5 3926 aa8.37□□□□□ -1.07
PCNX1-202ENST00000439984 M0QZ58 72 aa8.36□□□□□ -1.07
PCNX1-202ENST00000439984 KMT2BQ9UMN6 2715 aaPredicted RBP8.36□□□□□ -1.07
PCNX1-202ENST00000439984 STAB2Q8WWQ8 2551 aa8.33□□□□□ -1.08
PCNX1-202ENST00000439984 CUBNO60494 3623 aa8.33□□□□□ -1.08
PCNX1-202ENST00000439984 J3QL48 77 aa8.32□□□□□ -1.08
PCNX1-202ENST00000439984 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
PCNX1-202ENST00000439984 C20orf166-AS1Q96NR2 134 aa8.25□□□□□ -1.09
PCNX1-202ENST00000439984 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
PCNX1-202ENST00000439984 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
PCNX1-202ENST00000439984 TENM4Q6N022 2769 aa8.22□□□□□ -1.09
PCNX1-202ENST00000439984 KRTAP10-1P60331 282 aa8.22□□□□□ -1.09
PCNX1-202ENST00000439984 CSMD2Q7Z408 3487 aa8.2□□□□□ -1.1
PCNX1-202ENST00000439984 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
PCNX1-202ENST00000439984 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
PCNX1-202ENST00000439984 PDZD2O15018 2839 aa8.17□□□□□ -1.1
PCNX1-202ENST00000439984 TENM1Q9UKZ4 2725 aa8.17□□□□□ -1.1
PCNX1-202ENST00000439984 H0YAA0 97 aa8.16□□□□□ -1.1
PCNX1-202ENST00000439984 TENM3Q9P273 2699 aa8.14□□□□□ -1.11
PCNX1-202ENST00000439984 VWFP04275 2813 aa8.12□□□□□ -1.11
PCNX1-202ENST00000439984 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
PCNX1-202ENST00000439984 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
PCNX1-202ENST00000439984 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
PCNX1-202ENST00000439984 M0R2T5 61 aa8.02□□□□□ -1.13
PCNX1-202ENST00000439984 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
PCNX1-202ENST00000439984 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
PCNX1-202ENST00000439984 ZFHX3Q15911 3703 aa7.96□□□□□ -1.13
PCNX1-202ENST00000439984 P0C880 135 aa7.92□□□□□ -1.14
PCNX1-202ENST00000439984 Q5VSD8 79 aa7.87□□□□□ -1.15
PCNX1-202ENST00000439984 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
PCNX1-202ENST00000439984 PKD1L1Q8TDX9 2849 aa7.87□□□□□ -1.15
PCNX1-202ENST00000439984 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
PCNX1-202ENST00000439984 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
PCNX1-202ENST00000439984 TRRAPQ9Y4A5 3859 aa7.83□□□□□ -1.16
PCNX1-202ENST00000439984 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
PCNX1-202ENST00000439984 TNP1P09430 55 aa7.73□□□□□ -1.17
PCNX1-202ENST00000439984 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
PCNX1-202ENST00000439984 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.18
PCNX1-202ENST00000439984 TGP01266 2768 aa7.71□□□□□ -1.18
PCNX1-202ENST00000439984 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
PCNX1-202ENST00000439984 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
PCNX1-202ENST00000439984 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
PCNX1-202ENST00000439984 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
PCNX1-202ENST00000439984 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
PCNX1-202ENST00000439984 AKAP9Q99996 3911 aa7.5□□□□□ -1.21
PCNX1-202ENST00000439984 XP32Q5T750 250 aa7.46□□□□□ -1.21
PCNX1-202ENST00000439984 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.22
PCNX1-202ENST00000439984 FBN3Q75N90 2809 aa7.41□□□□□ -1.22
PCNX1-202ENST00000439984 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.23
PCNX1-202ENST00000439984 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
PCNX1-202ENST00000439984 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
PCNX1-202ENST00000439984 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
PCNX1-202ENST00000439984 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
PCNX1-202ENST00000439984 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
PCNX1-202ENST00000439984 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
PCNX1-202ENST00000439984 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
PCNX1-202ENST00000439984 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
PCNX1-202ENST00000439984 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
PCNX1-202ENST00000439984 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
PCNX1-202ENST00000439984 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
PCNX1-202ENST00000439984 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
PCNX1-202ENST00000439984 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
PCNX1-202ENST00000439984 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.31
PCNX1-202ENST00000439984 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
PCNX1-202ENST00000439984 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.31
PCNX1-202ENST00000439984 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
PCNX1-202ENST00000439984 INE1O15225 51 aa6.8□□□□□ -1.32
PCNX1-202ENST00000439984 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
PCNX1-202ENST00000439984 ANK2Q01484 3957 aa6.74□□□□□ -1.33
PCNX1-202ENST00000439984 DNAH11Q96DT5 4516 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms