RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
BDNF-211ENST00000439476 TENM4Q6N022 2769 aa3.94□□□□□ -1.78
BDNF-211ENST00000439476 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
BDNF-211ENST00000439476 CMYA5Q8N3K9 4069 aa3.93□□□□□ -1.78
BDNF-211ENST00000439476 CSMD3Q7Z407 3707 aa3.93□□□□□ -1.78
BDNF-211ENST00000439476 COX6B2Q6YFQ2 88 aa3.93□□□□□ -1.78
BDNF-211ENST00000439476 MMP24-AS1A0A0U1RRL7 71 aa3.92□□□□□ -1.78
BDNF-211ENST00000439476 A0A1B0GU33 70 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 HRES1P13985 223 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 MXRA5Q9NR99 2828 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 LCE6AA0A183 80 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 PLAC8Q9NZF1 115 aa3.91□□□□□ -1.78
BDNF-211ENST00000439476 KRTAP4-16G5E9R7 235 aaPredicted RBP3.9□□□□□ -1.78
BDNF-211ENST00000439476 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
BDNF-211ENST00000439476 APCP25054 2843 aa3.9□□□□□ -1.79
BDNF-211ENST00000439476 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
BDNF-211ENST00000439476 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
BDNF-211ENST00000439476 ITPR2Q14571 2701 aa3.89□□□□□ -1.79
BDNF-211ENST00000439476 NBEAL1Q6ZS30 2694 aa3.88□□□□□ -1.79
BDNF-211ENST00000439476 P0C880 135 aa3.88□□□□□ -1.79
BDNF-211ENST00000439476 Q8N1X5 172 aa3.88□□□□□ -1.79
BDNF-211ENST00000439476 TRRAPQ9Y4A5 3859 aa3.87□□□□□ -1.79
BDNF-211ENST00000439476 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
BDNF-211ENST00000439476 HIVEP1P15822 2718 aa3.86□□□□□ -1.79
BDNF-211ENST00000439476 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
BDNF-211ENST00000439476 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
BDNF-211ENST00000439476 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.79
BDNF-211ENST00000439476 LINC00483Q53H64 154 aa3.84□□□□□ -1.79
BDNF-211ENST00000439476 Q6ZSA8 131 aa3.84□□□□□ -1.79
BDNF-211ENST00000439476 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
BDNF-211ENST00000439476 A0A087X002 238 aa3.84□□□□□ -1.8
BDNF-211ENST00000439476 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.8
BDNF-211ENST00000439476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.84□□□□□ -1.8
BDNF-211ENST00000439476 Q5W150 140 aa3.83□□□□□ -1.8
BDNF-211ENST00000439476 KRTAP1-5Q9BYS1 174 aa3.83□□□□□ -1.8
BDNF-211ENST00000439476 A0A0D9SG42 100 aa3.82□□□□□ -1.8
BDNF-211ENST00000439476 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
BDNF-211ENST00000439476 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
BDNF-211ENST00000439476 A8MUU9 505 aa3.81□□□□□ -1.8
BDNF-211ENST00000439476 SMR3BP02814 79 aaPredicted RBP3.81□□□□□ -1.8
BDNF-211ENST00000439476 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
BDNF-211ENST00000439476 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
BDNF-211ENST00000439476 S4R3F8 94 aa3.78□□□□□ -1.8
BDNF-211ENST00000439476 LYSTQ99698 3801 aa3.77□□□□□ -1.81
BDNF-211ENST00000439476 RPL37P61927 97 aaKnown RBP3.77□□□□□ -1.81
BDNF-211ENST00000439476 PDZD2O15018 2839 aa3.77□□□□□ -1.81
BDNF-211ENST00000439476 KRTAP11-1Q8IUC1 163 aa3.76□□□□□ -1.81
BDNF-211ENST00000439476 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
BDNF-211ENST00000439476 PANO1I0J062 215 aa3.75□□□□□ -1.81
BDNF-211ENST00000439476 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
BDNF-211ENST00000439476 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
BDNF-211ENST00000439476 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
BDNF-211ENST00000439476 R4GN34 69 aa3.72□□□□□ -1.81
BDNF-211ENST00000439476 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
BDNF-211ENST00000439476 TENM3Q9P273 2699 aa3.69□□□□□ -1.82
BDNF-211ENST00000439476 DNAH7Q8WXX0 4024 aa3.68□□□□□ -1.82
BDNF-211ENST00000439476 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
BDNF-211ENST00000439476 VWFP04275 2813 aa3.67□□□□□ -1.82
BDNF-211ENST00000439476 TENM1Q9UKZ4 2725 aa3.65□□□□□ -1.82
BDNF-211ENST00000439476 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
BDNF-211ENST00000439476 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
BDNF-211ENST00000439476 M0R2T5 61 aa3.63□□□□□ -1.83
BDNF-211ENST00000439476 M0QZ58 72 aa3.62□□□□□ -1.83
BDNF-211ENST00000439476 Q5VSD8 79 aa3.61□□□□□ -1.83
BDNF-211ENST00000439476 DNHD1Q96M86 4753 aa3.6□□□□□ -1.83
BDNF-211ENST00000439476 KRTAP10-2P60368 255 aa3.59□□□□□ -1.83
BDNF-211ENST00000439476 PKD1L1Q8TDX9 2849 aa3.59□□□□□ -1.84
BDNF-211ENST00000439476 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
BDNF-211ENST00000439476 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
BDNF-211ENST00000439476 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
BDNF-211ENST00000439476 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
BDNF-211ENST00000439476 KRTAP13-2Q52LG2 175 aa3.55□□□□□ -1.84
BDNF-211ENST00000439476 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
BDNF-211ENST00000439476 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
BDNF-211ENST00000439476 FRAS1Q86XX4 4008 aa3.51□□□□□ -1.85
BDNF-211ENST00000439476 DNAH9Q9NYC9 4486 aa3.51□□□□□ -1.85
BDNF-211ENST00000439476 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
BDNF-211ENST00000439476 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
BDNF-211ENST00000439476 TGP01266 2768 aa3.49□□□□□ -1.85
BDNF-211ENST00000439476 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
BDNF-211ENST00000439476 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
BDNF-211ENST00000439476 SRRM2Q9UQ35 2752 aaKnown RBP3.48□□□□□ -1.85
BDNF-211ENST00000439476 H0YAA0 97 aa3.47□□□□□ -1.85
BDNF-211ENST00000439476 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
BDNF-211ENST00000439476 TENM2Q9NT68 2774 aa3.47□□□□□ -1.85
BDNF-211ENST00000439476 DYNC2H1Q8NCM8 4307 aaKnown RBP3.46□□□□□ -1.86
BDNF-211ENST00000439476 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
BDNF-211ENST00000439476 TNP1P09430 55 aa3.44□□□□□ -1.86
BDNF-211ENST00000439476 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
BDNF-211ENST00000439476 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
BDNF-211ENST00000439476 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
BDNF-211ENST00000439476 DNAH10Q8IVF4 4471 aa3.41□□□□□ -1.86
BDNF-211ENST00000439476 KMT2AQ03164 3969 aa3.41□□□□□ -1.86
BDNF-211ENST00000439476 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.86
BDNF-211ENST00000439476 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
BDNF-211ENST00000439476 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
BDNF-211ENST00000439476 STARD9Q9P2P6 4700 aa3.37□□□□□ -1.87
BDNF-211ENST00000439476 HUWE1Q7Z6Z7 4374 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms