RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 HRES1P13985 223 aa8.18□□□□□ -1.1
PCNX3-202ENST00000439247 MOBPQ13875 183 aa8.18□□□□□ -1.1
PCNX3-202ENST00000439247 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
PCNX3-202ENST00000439247 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
PCNX3-202ENST00000439247 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
PCNX3-202ENST00000439247 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
PCNX3-202ENST00000439247 DNAH2Q9P225 4427 aa8.14□□□□□ -1.11
PCNX3-202ENST00000439247 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
PCNX3-202ENST00000439247 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
PCNX3-202ENST00000439247 PLAC8Q9NZF1 115 aa8.13□□□□□ -1.11
PCNX3-202ENST00000439247 Q6ZR54 194 aa8.12□□□□□ -1.11
PCNX3-202ENST00000439247 KRTAP13-1Q8IUC0 172 aa8.12□□□□□ -1.11
PCNX3-202ENST00000439247 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
PCNX3-202ENST00000439247 HYDINQ4G0P3 5121 aa8.12□□□□□ -1.11
PCNX3-202ENST00000439247 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
PCNX3-202ENST00000439247 WWC2-AS2Q96NR7 200 aa8.1□□□□□ -1.11
PCNX3-202ENST00000439247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
PCNX3-202ENST00000439247 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
PCNX3-202ENST00000439247 Q5W150 140 aa8.08□□□□□ -1.12
PCNX3-202ENST00000439247 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
PCNX3-202ENST00000439247 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
PCNX3-202ENST00000439247 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
PCNX3-202ENST00000439247 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
PCNX3-202ENST00000439247 CDK2AP2O75956 126 aa8.05□□□□□ -1.12
PCNX3-202ENST00000439247 LY6G6CO95867 125 aa8.05□□□□□ -1.12
PCNX3-202ENST00000439247 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
PCNX3-202ENST00000439247 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
PCNX3-202ENST00000439247 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
PCNX3-202ENST00000439247 ALMS1Q8TCU4 4167 aa8.01□□□□□ -1.13
PCNX3-202ENST00000439247 PRAC1Q96KF2 57 aa8□□□□□ -1.13
PCNX3-202ENST00000439247 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
PCNX3-202ENST00000439247 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
PCNX3-202ENST00000439247 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
PCNX3-202ENST00000439247 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
PCNX3-202ENST00000439247 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
PCNX3-202ENST00000439247 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
PCNX3-202ENST00000439247 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
PCNX3-202ENST00000439247 HECTD4Q9Y4D8 3996 aa7.97□□□□□ -1.13
PCNX3-202ENST00000439247 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
PCNX3-202ENST00000439247 DNAH17Q9UFH2 4485 aa7.97□□□□□ -1.13
PCNX3-202ENST00000439247 DNAH6Q9C0G6 4158 aa7.96□□□□□ -1.13
PCNX3-202ENST00000439247 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
PCNX3-202ENST00000439247 LINC00313P59037 77 aa7.94□□□□□ -1.14
PCNX3-202ENST00000439247 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
PCNX3-202ENST00000439247 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
PCNX3-202ENST00000439247 DNAH11Q96DT5 4516 aa7.9□□□□□ -1.14
PCNX3-202ENST00000439247 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.14
PCNX3-202ENST00000439247 ACYP2P14621 99 aa7.89□□□□□ -1.15
PCNX3-202ENST00000439247 C1orf134Q5TEV5 83 aa7.89□□□□□ -1.15
PCNX3-202ENST00000439247 A0A087WTM6 91 aa7.88□□□□□ -1.15
PCNX3-202ENST00000439247 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
PCNX3-202ENST00000439247 ZNF861PO60384 105 aa7.87□□□□□ -1.15
PCNX3-202ENST00000439247 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
PCNX3-202ENST00000439247 RYR2Q92736 4967 aa7.86□□□□□ -1.15
PCNX3-202ENST00000439247 RTL8CO15255 209 aa7.85□□□□□ -1.15
PCNX3-202ENST00000439247 PKD1P98161 4303 aa7.85□□□□□ -1.15
PCNX3-202ENST00000439247 A0A1B0GU69 56 aa7.84□□□□□ -1.15
PCNX3-202ENST00000439247 DMAC1Q96GE9 116 aa7.83□□□□□ -1.16
PCNX3-202ENST00000439247 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
PCNX3-202ENST00000439247 RYR3Q15413 4870 aa7.8□□□□□ -1.16
PCNX3-202ENST00000439247 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
PCNX3-202ENST00000439247 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
PCNX3-202ENST00000439247 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
PCNX3-202ENST00000439247 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
PCNX3-202ENST00000439247 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
PCNX3-202ENST00000439247 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
PCNX3-202ENST00000439247 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
PCNX3-202ENST00000439247 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
PCNX3-202ENST00000439247 UQCR11O14957 56 aa7.69□□□□□ -1.18
PCNX3-202ENST00000439247 SPINK1P00995 79 aa7.69□□□□□ -1.18
PCNX3-202ENST00000439247 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
PCNX3-202ENST00000439247 KRTAP13-2Q52LG2 175 aa7.67□□□□□ -1.18
PCNX3-202ENST00000439247 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
PCNX3-202ENST00000439247 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
PCNX3-202ENST00000439247 KRTAP10-1P60331 282 aa7.66□□□□□ -1.18
PCNX3-202ENST00000439247 CSAG1Q6PB30 78 aa7.66□□□□□ -1.18
PCNX3-202ENST00000439247 SSBP3-AS1Q7Z2R9 100 aa7.65□□□□□ -1.18
PCNX3-202ENST00000439247 Q8N1X5 172 aa7.62□□□□□ -1.19
PCNX3-202ENST00000439247 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
PCNX3-202ENST00000439247 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
PCNX3-202ENST00000439247 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
PCNX3-202ENST00000439247 Q6ZSA8 131 aa7.56□□□□□ -1.2
PCNX3-202ENST00000439247 FAT1Q14517 4588 aa7.54□□□□□ -1.2
PCNX3-202ENST00000439247 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
PCNX3-202ENST00000439247 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
PCNX3-202ENST00000439247 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
PCNX3-202ENST00000439247 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
PCNX3-202ENST00000439247 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
PCNX3-202ENST00000439247 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
PCNX3-202ENST00000439247 H0YAA0 97 aa7.47□□□□□ -1.21
PCNX3-202ENST00000439247 SMR3BP02814 79 aaPredicted RBP7.46□□□□□ -1.22
PCNX3-202ENST00000439247 HSPG2P98160 4391 aa7.42□□□□□ -1.22
PCNX3-202ENST00000439247 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
PCNX3-202ENST00000439247 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
PCNX3-202ENST00000439247 A8MUU9 505 aa7.39□□□□□ -1.23
PCNX3-202ENST00000439247 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
PCNX3-202ENST00000439247 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
PCNX3-202ENST00000439247 RYR1P21817 5038 aa7.37□□□□□ -1.23
PCNX3-202ENST00000439247 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
PCNX3-202ENST00000439247 A0A1B0GU33 70 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms