RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 C14orf144Q96I85 54 aa3.95□□□□□ -1.78
VPS50-204ENST00000438395 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
VPS50-204ENST00000438395 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 ANKRD29Q8N6D5 301 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 VAMP8Q9BV40 100 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 HIGD1BQ9P298 99 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 PAM16Q9Y3D7 125 aa3.94□□□□□ -1.78
VPS50-204ENST00000438395 H3BQ85 93 aa3.93□□□□□ -1.78
VPS50-204ENST00000438395 TRACP01848 142 aa3.93□□□□□ -1.78
VPS50-204ENST00000438395 PSMB2P49721 201 aa3.93□□□□□ -1.78
VPS50-204ENST00000438395 ORMDL1Q9P0S3 153 aa3.93□□□□□ -1.78
VPS50-204ENST00000438395 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
VPS50-204ENST00000438395 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
VPS50-204ENST00000438395 IGHV6-1A0A0B4J1U7 121 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 CCKP06307 115 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 COX6CP09669 75 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 CEND1Q8N111 149 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 MTURNQ8N3F0 131 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 MPLKIPQ8TAP9 179 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
VPS50-204ENST00000438395 USH2AO75445 5202 aa3.9□□□□□ -1.78
VPS50-204ENST00000438395 C2orf91Q6ZV80 131 aa3.9□□□□□ -1.79
VPS50-204ENST00000438395 TMEM256-PLSCR3K7ERE1 68 aa3.89□□□□□ -1.79
VPS50-204ENST00000438395 DEFB116Q30KQ4 102 aa3.89□□□□□ -1.79
VPS50-204ENST00000438395 VPS25Q9BRG1 176 aa3.89□□□□□ -1.79
VPS50-204ENST00000438395 C8orf87E5RJ46 101 aa3.88□□□□□ -1.79
VPS50-204ENST00000438395 FXYD2P54710 66 aa3.88□□□□□ -1.79
VPS50-204ENST00000438395 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
VPS50-204ENST00000438395 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
VPS50-204ENST00000438395 MT2AP02795 61 aa3.87□□□□□ -1.79
VPS50-204ENST00000438395 HSD52Q0P140 79 aa3.87□□□□□ -1.79
VPS50-204ENST00000438395 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
VPS50-204ENST00000438395 HRES1P13985 223 aa3.86□□□□□ -1.79
VPS50-204ENST00000438395 LYRM7Q5U5X0 104 aa3.86□□□□□ -1.79
VPS50-204ENST00000438395 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
VPS50-204ENST00000438395 LINC00472Q9H8W2 130 aa3.86□□□□□ -1.79
VPS50-204ENST00000438395 K7ERJ3 54 aa3.85□□□□□ -1.79
VPS50-204ENST00000438395 UBE2V1Q13404 147 aa3.85□□□□□ -1.79
VPS50-204ENST00000438395 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
VPS50-204ENST00000438395 LINC00846Q9NV44 126 aa3.85□□□□□ -1.79
VPS50-204ENST00000438395 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
VPS50-204ENST00000438395 J3KT08 172 aa3.84□□□□□ -1.79
VPS50-204ENST00000438395 NDUFB1O75438 58 aa3.84□□□□□ -1.79
VPS50-204ENST00000438395 MT1FP04733 61 aa3.84□□□□□ -1.79
VPS50-204ENST00000438395 SCGB1C2P0DMR2 95 aa3.84□□□□□ -1.79
VPS50-204ENST00000438395 RBM3P98179 157 aaKnown RBP3.84□□□□□ -1.79
VPS50-204ENST00000438395 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
VPS50-204ENST00000438395 ZCCHC13Q8WW36 166 aaKnown RBP3.84□□□□□ -1.79
VPS50-204ENST00000438395 SPINK7P58062 85 aa3.82□□□□□ -1.8
VPS50-204ENST00000438395 C9JAW5 83 aa3.81□□□□□ -1.8
VPS50-204ENST00000438395 WFDC13Q8IUB5 93 aa3.8□□□□□ -1.8
VPS50-204ENST00000438395 A8MWP4 228 aa3.79□□□□□ -1.8
VPS50-204ENST00000438395 UQCR10Q9UDW1 63 aa3.79□□□□□ -1.8
VPS50-204ENST00000438395 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
VPS50-204ENST00000438395 Q6ZQT0 140 aa3.77□□□□□ -1.81
VPS50-204ENST00000438395 JMJD7-PLA2G4BH0Y9G9 81 aa3.76□□□□□ -1.81
VPS50-204ENST00000438395 ATXN8Q156A1 80 aa3.76□□□□□ -1.81
VPS50-204ENST00000438395 PYY3Q5JQD4 70 aa3.76□□□□□ -1.81
VPS50-204ENST00000438395 C8orf17Q9NRJ1 99 aa3.76□□□□□ -1.81
VPS50-204ENST00000438395 A0A1B0GW54 56 aa3.75□□□□□ -1.81
VPS50-204ENST00000438395 PDE6GP18545 87 aa3.75□□□□□ -1.81
VPS50-204ENST00000438395 Q6ZVQ6 151 aa3.75□□□□□ -1.81
VPS50-204ENST00000438395 IGKV3D-7A0A0C4DH55 119 aa3.74□□□□□ -1.81
VPS50-204ENST00000438395 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
VPS50-204ENST00000438395 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
VPS50-204ENST00000438395 NDUFS5O43920 106 aa3.73□□□□□ -1.81
VPS50-204ENST00000438395 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
VPS50-204ENST00000438395 M0R143 59 aa3.72□□□□□ -1.81
VPS50-204ENST00000438395 NREPQ16612 68 aa3.72□□□□□ -1.81
VPS50-204ENST00000438395 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
VPS50-204ENST00000438395 PRR15Q8IV56 129 aa3.71□□□□□ -1.82
VPS50-204ENST00000438395 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
VPS50-204ENST00000438395 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
VPS50-204ENST00000438395 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
VPS50-204ENST00000438395 MRPL34Q9BQ48 92 aaKnown RBP3.7□□□□□ -1.82
VPS50-204ENST00000438395 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
VPS50-204ENST00000438395 NAA38Q9BRA0 125 aaKnown RBP3.69□□□□□ -1.82
VPS50-204ENST00000438395 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
VPS50-204ENST00000438395 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
VPS50-204ENST00000438395 MT3P25713 68 aa3.67□□□□□ -1.82
VPS50-204ENST00000438395 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
VPS50-204ENST00000438395 K7EQZ3 153 aa3.65□□□□□ -1.83
VPS50-204ENST00000438395 BPY2O14599 106 aa3.65□□□□□ -1.83
VPS50-204ENST00000438395 FAM236AA0A1B0GUQ0 79 aa3.63□□□□□ -1.83
VPS50-204ENST00000438395 FAM236BA0A1B0GV22 79 aa3.63□□□□□ -1.83
VPS50-204ENST00000438395 TSTD3H0UI37 97 aa3.63□□□□□ -1.83
VPS50-204ENST00000438395 BATFQ16520 125 aa3.62□□□□□ -1.83
VPS50-204ENST00000438395 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
VPS50-204ENST00000438395 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
VPS50-204ENST00000438395 H3BT86 120 aa3.61□□□□□ -1.83
VPS50-204ENST00000438395 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
VPS50-204ENST00000438395 HCG22E2RYF7 251 aa3.6□□□□□ -1.83
VPS50-204ENST00000438395 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
VPS50-204ENST00000438395 CXCL6P80162 114 aa3.59□□□□□ -1.83
VPS50-204ENST00000438395 C5orf47Q569G3 176 aa3.59□□□□□ -1.83
VPS50-204ENST00000438395 Q5W150 140 aa3.58□□□□□ -1.84
VPS50-204ENST00000438395 Q8N9L7 120 aa3.58□□□□□ -1.84
VPS50-204ENST00000438395 SMIM6P0DI80 62 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms