RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
KDM4C-206ENST00000438023 Q6ZR54 194 aa8.17□□□□□ -1.1
KDM4C-206ENST00000438023 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
KDM4C-206ENST00000438023 SPRR1BP22528 89 aa8.13□□□□□ -1.11
KDM4C-206ENST00000438023 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
KDM4C-206ENST00000438023 HIVEP1P15822 2718 aa8.13□□□□□ -1.11
KDM4C-206ENST00000438023 C9orf92A6NGG3 77 aa8.12□□□□□ -1.11
KDM4C-206ENST00000438023 KRTAP16-1A8MUX0 517 aa8.12□□□□□ -1.11
KDM4C-206ENST00000438023 ROMO1P60602 79 aa8.1□□□□□ -1.11
KDM4C-206ENST00000438023 KRTAP25-1Q3LHN0 102 aa8.1□□□□□ -1.11
KDM4C-206ENST00000438023 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
KDM4C-206ENST00000438023 A0A087X002 238 aa8.08□□□□□ -1.12
KDM4C-206ENST00000438023 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
KDM4C-206ENST00000438023 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
KDM4C-206ENST00000438023 KRTAP1-1Q07627 177 aa8.06□□□□□ -1.12
KDM4C-206ENST00000438023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
KDM4C-206ENST00000438023 A0A087WTM6 91 aa8□□□□□ -1.13
KDM4C-206ENST00000438023 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
KDM4C-206ENST00000438023 KRTAP7-1Q8IUC3 87 aa7.99□□□□□ -1.13
KDM4C-206ENST00000438023 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
KDM4C-206ENST00000438023 AKAP9Q99996 3911 aa7.96□□□□□ -1.14
KDM4C-206ENST00000438023 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
KDM4C-206ENST00000438023 KRTAP24-1Q3LI83 254 aa7.96□□□□□ -1.14
KDM4C-206ENST00000438023 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
KDM4C-206ENST00000438023 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
KDM4C-206ENST00000438023 VWFP04275 2813 aa7.91□□□□□ -1.14
KDM4C-206ENST00000438023 ITPR2Q14571 2701 aa7.9□□□□□ -1.14
KDM4C-206ENST00000438023 A8MUU9 505 aa7.9□□□□□ -1.14
KDM4C-206ENST00000438023 KRTAP1-5Q9BYS1 174 aa7.87□□□□□ -1.15
KDM4C-206ENST00000438023 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
KDM4C-206ENST00000438023 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
KDM4C-206ENST00000438023 PANO1I0J062 215 aa7.84□□□□□ -1.15
KDM4C-206ENST00000438023 PKD1L1Q8TDX9 2849 aa7.81□□□□□ -1.16
KDM4C-206ENST00000438023 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
KDM4C-206ENST00000438023 ZNF469Q96JG9 3925 aaPredicted RBP7.77□□□□□ -1.17
KDM4C-206ENST00000438023 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
KDM4C-206ENST00000438023 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
KDM4C-206ENST00000438023 LINC00483Q53H64 154 aa7.76□□□□□ -1.17
KDM4C-206ENST00000438023 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
KDM4C-206ENST00000438023 KMT2BQ9UMN6 2715 aaPredicted RBP7.75□□□□□ -1.17
KDM4C-206ENST00000438023 TENM1Q9UKZ4 2725 aa7.75□□□□□ -1.17
KDM4C-206ENST00000438023 PDZD2O15018 2839 aa7.74□□□□□ -1.17
KDM4C-206ENST00000438023 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
KDM4C-206ENST00000438023 Q6ZSA8 131 aa7.67□□□□□ -1.18
KDM4C-206ENST00000438023 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
KDM4C-206ENST00000438023 C10orf95Q9H7T3 257 aa7.63□□□□□ -1.19
KDM4C-206ENST00000438023 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
KDM4C-206ENST00000438023 TGP01266 2768 aa7.62□□□□□ -1.19
KDM4C-206ENST00000438023 S4R3F8 94 aa7.61□□□□□ -1.19
KDM4C-206ENST00000438023 H0YAA0 97 aa7.59□□□□□ -1.19
KDM4C-206ENST00000438023 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
KDM4C-206ENST00000438023 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
KDM4C-206ENST00000438023 R4GN34 69 aa7.54□□□□□ -1.2
KDM4C-206ENST00000438023 ANK3Q12955 4377 aaKnown RBP7.49□□□□□ -1.21
KDM4C-206ENST00000438023 FBN1P35555 2871 aaKnown RBP7.47□□□□□ -1.21
KDM4C-206ENST00000438023 OTOGQ6ZRI0 2925 aa7.46□□□□□ -1.22
KDM4C-206ENST00000438023 M0QZ58 72 aa7.45□□□□□ -1.22
KDM4C-206ENST00000438023 TENM4Q6N022 2769 aa7.45□□□□□ -1.22
KDM4C-206ENST00000438023 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
KDM4C-206ENST00000438023 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
KDM4C-206ENST00000438023 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
KDM4C-206ENST00000438023 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
KDM4C-206ENST00000438023 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
KDM4C-206ENST00000438023 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
KDM4C-206ENST00000438023 KRTAP10-1P60331 282 aa7.34□□□□□ -1.24
KDM4C-206ENST00000438023 CSMD3Q7Z407 3707 aa7.33□□□□□ -1.24
KDM4C-206ENST00000438023 P0C880 135 aa7.33□□□□□ -1.24
KDM4C-206ENST00000438023 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
KDM4C-206ENST00000438023 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
KDM4C-206ENST00000438023 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
KDM4C-206ENST00000438023 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
KDM4C-206ENST00000438023 DNAH10Q8IVF4 4471 aa7.1□□□□□ -1.27
KDM4C-206ENST00000438023 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
KDM4C-206ENST00000438023 FBN3Q75N90 2809 aa7.05□□□□□ -1.28
KDM4C-206ENST00000438023 ANK2Q01484 3957 aa7.02□□□□□ -1.29
KDM4C-206ENST00000438023 J3QL48 77 aa7.02□□□□□ -1.29
KDM4C-206ENST00000438023 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
KDM4C-206ENST00000438023 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
KDM4C-206ENST00000438023 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
KDM4C-206ENST00000438023 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
KDM4C-206ENST00000438023 LYSTQ99698 3801 aa6.93□□□□□ -1.3
KDM4C-206ENST00000438023 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
KDM4C-206ENST00000438023 TNP1P09430 55 aa6.91□□□□□ -1.3
KDM4C-206ENST00000438023 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
KDM4C-206ENST00000438023 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
KDM4C-206ENST00000438023 M0R2T5 61 aa6.85□□□□□ -1.31
KDM4C-206ENST00000438023 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
KDM4C-206ENST00000438023 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
KDM4C-206ENST00000438023 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
KDM4C-206ENST00000438023 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
KDM4C-206ENST00000438023 Q5VSD8 79 aa6.82□□□□□ -1.32
KDM4C-206ENST00000438023 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
KDM4C-206ENST00000438023 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
KDM4C-206ENST00000438023 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
KDM4C-206ENST00000438023 PLECQ15149 4684 aaKnown RBP6.72□□□□□ -1.33
KDM4C-206ENST00000438023 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.33
KDM4C-206ENST00000438023 XP32Q5T750 250 aa6.7□□□□□ -1.34
KDM4C-206ENST00000438023 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
KDM4C-206ENST00000438023 DNAH7Q8WXX0 4024 aa6.6□□□□□ -1.35
KDM4C-206ENST00000438023 KRTAP21-3Q3LHN1 58 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms