RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
LINC01088-201ENST00000437737 A0A1W2PNM2 257 aa7.72□□□□□ -1.17
LINC01088-201ENST00000437737 PCOTHQ58A44 107 aa7.71□□□□□ -1.18
LINC01088-201ENST00000437737 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
LINC01088-201ENST00000437737 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
LINC01088-201ENST00000437737 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
LINC01088-201ENST00000437737 A0A0G2JQZ4 141 aa7.68□□□□□ -1.18
LINC01088-201ENST00000437737 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
LINC01088-201ENST00000437737 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
LINC01088-201ENST00000437737 UBL5Q9BZL1 73 aa7.67□□□□□ -1.18
LINC01088-201ENST00000437737 A0A087WSZ3 146 aa7.65□□□□□ -1.18
LINC01088-201ENST00000437737 NREPQ16612 68 aa7.65□□□□□ -1.18
LINC01088-201ENST00000437737 Q5XG85 94 aa7.65□□□□□ -1.18
LINC01088-201ENST00000437737 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
LINC01088-201ENST00000437737 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
LINC01088-201ENST00000437737 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
LINC01088-201ENST00000437737 Q6ZVQ6 151 aa7.59□□□□□ -1.19
LINC01088-201ENST00000437737 J3KT08 172 aa7.57□□□□□ -1.2
LINC01088-201ENST00000437737 LINC00643Q86TS7 51 aa7.57□□□□□ -1.2
LINC01088-201ENST00000437737 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
LINC01088-201ENST00000437737 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
LINC01088-201ENST00000437737 ATP5EP2Q5VTU8 51 aa7.55□□□□□ -1.2
LINC01088-201ENST00000437737 USH2AO75445 5202 aa7.54□□□□□ -1.2
LINC01088-201ENST00000437737 BPY2O14599 106 aa7.54□□□□□ -1.2
LINC01088-201ENST00000437737 SIGMAR1Q99720 223 aa7.54□□□□□ -1.2
LINC01088-201ENST00000437737 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
LINC01088-201ENST00000437737 CXCL6P80162 114 aa7.53□□□□□ -1.2
LINC01088-201ENST00000437737 C1orf195Q5TG92 126 aa7.51□□□□□ -1.21
LINC01088-201ENST00000437737 NDUFB1O75438 58 aa7.5□□□□□ -1.21
LINC01088-201ENST00000437737 IGKV4-1P06312 121 aa7.5□□□□□ -1.21
LINC01088-201ENST00000437737 Q96NJ1 140 aa7.49□□□□□ -1.21
LINC01088-201ENST00000437737 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
LINC01088-201ENST00000437737 A8MWP4 228 aa7.46□□□□□ -1.22
LINC01088-201ENST00000437737 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
LINC01088-201ENST00000437737 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
LINC01088-201ENST00000437737 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
LINC01088-201ENST00000437737 DSCR10P59022 87 aa7.43□□□□□ -1.22
LINC01088-201ENST00000437737 PRR15Q8IV56 129 aa7.42□□□□□ -1.22
LINC01088-201ENST00000437737 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
LINC01088-201ENST00000437737 A0A1B0GVX0 72 aa7.4□□□□□ -1.22
LINC01088-201ENST00000437737 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
LINC01088-201ENST00000437737 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.22
LINC01088-201ENST00000437737 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
LINC01088-201ENST00000437737 K7EQZ3 153 aa7.39□□□□□ -1.23
LINC01088-201ENST00000437737 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
LINC01088-201ENST00000437737 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
LINC01088-201ENST00000437737 LINC00313P59037 77 aa7.36□□□□□ -1.23
LINC01088-201ENST00000437737 Q8N9L7 120 aa7.36□□□□□ -1.23
LINC01088-201ENST00000437737 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
LINC01088-201ENST00000437737 MACF1Q9UPN3 7388 aaKnown RBP7.34□□□□□ -1.24
LINC01088-201ENST00000437737 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
LINC01088-201ENST00000437737 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
LINC01088-201ENST00000437737 CASC2Q6XLA1 102 aa7.31□□□□□ -1.24
LINC01088-201ENST00000437737 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
LINC01088-201ENST00000437737 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
LINC01088-201ENST00000437737 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
LINC01088-201ENST00000437737 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
LINC01088-201ENST00000437737 A0A087WVE0 104 aa7.28□□□□□ -1.24
LINC01088-201ENST00000437737 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
LINC01088-201ENST00000437737 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
LINC01088-201ENST00000437737 WFDC13Q8IUB5 93 aa7.26□□□□□ -1.25
LINC01088-201ENST00000437737 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
LINC01088-201ENST00000437737 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
LINC01088-201ENST00000437737 FAM236AA0A1B0GUQ0 79 aa7.22□□□□□ -1.25
LINC01088-201ENST00000437737 FAM236BA0A1B0GV22 79 aa7.22□□□□□ -1.25
LINC01088-201ENST00000437737 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
LINC01088-201ENST00000437737 SMIM20Q8N5G0 67 aa7.21□□□□□ -1.26
LINC01088-201ENST00000437737 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.26
LINC01088-201ENST00000437737 TP53AIP1Q9HCN2 124 aa7.21□□□□□ -1.26
LINC01088-201ENST00000437737 LCE2BO14633 110 aa7.2□□□□□ -1.26
LINC01088-201ENST00000437737 NDUFS5O43920 106 aa7.2□□□□□ -1.26
LINC01088-201ENST00000437737 ATOX1O00244 68 aa7.19□□□□□ -1.26
LINC01088-201ENST00000437737 MT2AP02795 61 aa7.19□□□□□ -1.26
LINC01088-201ENST00000437737 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
LINC01088-201ENST00000437737 Q75L30 129 aa7.18□□□□□ -1.26
LINC01088-201ENST00000437737 A8MUU9 505 aa7.17□□□□□ -1.26
LINC01088-201ENST00000437737 UQCRQO14949 82 aa7.15□□□□□ -1.26
LINC01088-201ENST00000437737 MT1FP04733 61 aa7.13□□□□□ -1.27
LINC01088-201ENST00000437737 OCR1Q9BZK8 76 aa7.12□□□□□ -1.27
LINC01088-201ENST00000437737 TRAV7A0A075B6U4 112 aa7.11□□□□□ -1.27
LINC01088-201ENST00000437737 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
LINC01088-201ENST00000437737 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
LINC01088-201ENST00000437737 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
LINC01088-201ENST00000437737 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
LINC01088-201ENST00000437737 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
LINC01088-201ENST00000437737 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
LINC01088-201ENST00000437737 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
LINC01088-201ENST00000437737 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
LINC01088-201ENST00000437737 MP68P56378 58 aa7.06□□□□□ -1.28
LINC01088-201ENST00000437737 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
LINC01088-201ENST00000437737 H3BPC8 53 aa7.04□□□□□ -1.28
LINC01088-201ENST00000437737 H0Y9P7 68 aa7.03□□□□□ -1.28
LINC01088-201ENST00000437737 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
LINC01088-201ENST00000437737 COX7CP15954 63 aa7.01□□□□□ -1.29
LINC01088-201ENST00000437737 KRTAP6-3Q3LI67 103 aa7.01□□□□□ -1.29
LINC01088-201ENST00000437737 Q5W150 140 aa7.01□□□□□ -1.29
LINC01088-201ENST00000437737 LOC101927531A0A1B0GV80 90 aa6.98□□□□□ -1.29
LINC01088-201ENST00000437737 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
LINC01088-201ENST00000437737 LINC00208Q96KT6 92 aa6.97□□□□□ -1.29
LINC01088-201ENST00000437737 NEBP20929 6669 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms