RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

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Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 EPPK1P58107 5090 aaKnown RBP5.73□□□□□ -1.49
CUX1-206ENST00000437600 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
CUX1-206ENST00000437600 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
CUX1-206ENST00000437600 FAT1Q14517 4588 aa5.72□□□□□ -1.49
CUX1-206ENST00000437600 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.5
CUX1-206ENST00000437600 Q5VV11 94 aa5.71□□□□□ -1.5
CUX1-206ENST00000437600 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
CUX1-206ENST00000437600 A0A1B0GW54 56 aa5.71□□□□□ -1.5
CUX1-206ENST00000437600 MOBPQ13875 183 aa5.71□□□□□ -1.5
CUX1-206ENST00000437600 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
CUX1-206ENST00000437600 CHKB-CPT1BH3BT56 60 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 CIRBP-AS1Q8TBR5 109 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 SPRR1BP22528 89 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 LINC00313P59037 77 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 KRTAP10-1P60331 282 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 PLAC8Q9NZF1 115 aa5.69□□□□□ -1.5
CUX1-206ENST00000437600 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
CUX1-206ENST00000437600 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
CUX1-206ENST00000437600 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
CUX1-206ENST00000437600 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CUX1-206ENST00000437600 A0A087X002 238 aa5.66□□□□□ -1.5
CUX1-206ENST00000437600 NDUFB1O75438 58 aa5.66□□□□□ -1.5
CUX1-206ENST00000437600 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
CUX1-206ENST00000437600 MP68P56378 58 aa5.65□□□□□ -1.5
CUX1-206ENST00000437600 IGHV6-1A0A0B4J1U7 121 aa5.65□□□□□ -1.51
CUX1-206ENST00000437600 A8MWP4 228 aa5.65□□□□□ -1.51
CUX1-206ENST00000437600 ZNF861PO60384 105 aa5.65□□□□□ -1.51
CUX1-206ENST00000437600 PRR15LQ9BU68 103 aa5.65□□□□□ -1.51
CUX1-206ENST00000437600 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
CUX1-206ENST00000437600 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
CUX1-206ENST00000437600 Q96NJ1 140 aa5.63□□□□□ -1.51
CUX1-206ENST00000437600 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
CUX1-206ENST00000437600 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
CUX1-206ENST00000437600 H0Y9P7 68 aa5.61□□□□□ -1.51
CUX1-206ENST00000437600 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
CUX1-206ENST00000437600 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
CUX1-206ENST00000437600 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
CUX1-206ENST00000437600 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
CUX1-206ENST00000437600 A6NED7 52 aa5.6□□□□□ -1.51
CUX1-206ENST00000437600 LIMD2Q9BT23 127 aa5.6□□□□□ -1.51
CUX1-206ENST00000437600 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
CUX1-206ENST00000437600 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
CUX1-206ENST00000437600 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
CUX1-206ENST00000437600 HSPG2P98160 4391 aa5.58□□□□□ -1.52
CUX1-206ENST00000437600 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
CUX1-206ENST00000437600 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
CUX1-206ENST00000437600 Q6ZSA8 131 aa5.57□□□□□ -1.52
CUX1-206ENST00000437600 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
CUX1-206ENST00000437600 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
CUX1-206ENST00000437600 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
CUX1-206ENST00000437600 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
CUX1-206ENST00000437600 Q75L30 129 aa5.55□□□□□ -1.52
CUX1-206ENST00000437600 COA5Q86WW8 74 aa5.54□□□□□ -1.52
CUX1-206ENST00000437600 RYR1P21817 5038 aa5.53□□□□□ -1.52
CUX1-206ENST00000437600 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
CUX1-206ENST00000437600 FLG2Q5D862 2391 aaPredicted RBP5.52□□□□□ -1.53
CUX1-206ENST00000437600 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
CUX1-206ENST00000437600 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
CUX1-206ENST00000437600 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
CUX1-206ENST00000437600 H3BPC8 53 aa5.5□□□□□ -1.53
CUX1-206ENST00000437600 Q5W150 140 aa5.5□□□□□ -1.53
CUX1-206ENST00000437600 SPAG11AQ6PDA7 123 aa5.5□□□□□ -1.53
CUX1-206ENST00000437600 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
CUX1-206ENST00000437600 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
CUX1-206ENST00000437600 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
CUX1-206ENST00000437600 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
CUX1-206ENST00000437600 IGLV7-46A0A075B6I9 117 aa5.46□□□□□ -1.53
CUX1-206ENST00000437600 ASB16-AS1Q495Z4 193 aa5.46□□□□□ -1.54
CUX1-206ENST00000437600 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
CUX1-206ENST00000437600 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
CUX1-206ENST00000437600 SPINK7P58062 85 aa5.45□□□□□ -1.54
CUX1-206ENST00000437600 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
CUX1-206ENST00000437600 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
CUX1-206ENST00000437600 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
CUX1-206ENST00000437600 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
CUX1-206ENST00000437600 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
CUX1-206ENST00000437600 HRES1P13985 223 aa5.39□□□□□ -1.55
CUX1-206ENST00000437600 KRTAP10-4P60372 401 aaPredicted RBP5.38□□□□□ -1.55
CUX1-206ENST00000437600 ABCA13Q86UQ4 5058 aa5.38□□□□□ -1.55
CUX1-206ENST00000437600 Q5VSD8 79 aa5.37□□□□□ -1.55
CUX1-206ENST00000437600 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
CUX1-206ENST00000437600 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
CUX1-206ENST00000437600 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
CUX1-206ENST00000437600 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
CUX1-206ENST00000437600 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.56
CUX1-206ENST00000437600 IGKV2-30P06310 120 aa5.34□□□□□ -1.56
CUX1-206ENST00000437600 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
CUX1-206ENST00000437600 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
CUX1-206ENST00000437600 CSAG1Q6PB30 78 aa5.33□□□□□ -1.56
CUX1-206ENST00000437600 TNXBP22105 4242 aa5.32□□□□□ -1.56
CUX1-206ENST00000437600 HERC2O95714 4834 aa5.32□□□□□ -1.56
CUX1-206ENST00000437600 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
CUX1-206ENST00000437600 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
CUX1-206ENST00000437600 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
CUX1-206ENST00000437600 ROMO1P60602 79 aa5.28□□□□□ -1.56
CUX1-206ENST00000437600 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
CUX1-206ENST00000437600 Q8N1X5 172 aa5.27□□□□□ -1.57
CUX1-206ENST00000437600 SPINK1P00995 79 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms