RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SMR3BP02814 79 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-216ENST00000437340 ZCCHC13Q8WW36 166 aaKnown RBP14.95□□□□□ -0.02
CPNE1-216ENST00000437340 IGHV6-1A0A0B4J1U7 121 aa14.94□□□□□ -0.02
CPNE1-216ENST00000437340 PLA2G1BP04054 148 aaKnown RBP14.92□□□□□ -0.02
CPNE1-216ENST00000437340 MP68P56378 58 aa14.92□□□□□ -0.02
CPNE1-216ENST00000437340 EPPK1P58107 5090 aaKnown RBP14.91□□□□□ -0.02
CPNE1-216ENST00000437340 ATP5EP56381 51 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-216ENST00000437340 H3BPC8 53 aa14.87□□□□□ -0.03
CPNE1-216ENST00000437340 TP53AIP1Q9HCN2 124 aa14.87□□□□□ -0.03
CPNE1-216ENST00000437340 FAT1Q14517 4588 aa14.87□□□□□ -0.03
CPNE1-216ENST00000437340 LIMD2Q9BT23 127 aa14.84□□□□□ -0.03
CPNE1-216ENST00000437340 HSPG2P98160 4391 aa14.83□□□□□ -0.03
CPNE1-216ENST00000437340 TYMSOSQ8TAI1 123 aa14.83□□□□□ -0.03
CPNE1-216ENST00000437340 H0Y9P7 68 aa14.83□□□□□ -0.04
CPNE1-216ENST00000437340 MRPL34Q9BQ48 92 aaKnown RBP14.83□□□□□ -0.04
CPNE1-216ENST00000437340 C8orf87E5RJ46 101 aa14.8□□□□□ -0.04
CPNE1-216ENST00000437340 RYR1P21817 5038 aa14.79□□□□□ -0.04
CPNE1-216ENST00000437340 KRTAP10-4P60372 401 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-216ENST00000437340 C4orf48Q5BLP8 95 aa14.79□□□□□ -0.04
CPNE1-216ENST00000437340 C1orf195Q5TG92 126 aa14.79□□□□□ -0.04
CPNE1-216ENST00000437340 NOTCH2NLQ7Z3S9 236 aa14.79□□□□□ -0.04
CPNE1-216ENST00000437340 TRAV22A0A0B4J277 110 aa14.78□□□□□ -0.04
CPNE1-216ENST00000437340 LINC00208Q96KT6 92 aa14.78□□□□□ -0.04
CPNE1-216ENST00000437340 SERP1Q9Y6X1 66 aa14.78□□□□□ -0.04
CPNE1-216ENST00000437340 SPINK1P00995 79 aa14.76□□□□□ -0.05
CPNE1-216ENST00000437340 NDUFS5O43920 106 aa14.71□□□□□ -0.05
CPNE1-216ENST00000437340 OXTP01178 125 aa14.7□□□□□ -0.06
CPNE1-216ENST00000437340 PRR26Q8N8Z3 221 aa14.7□□□□□ -0.06
CPNE1-216ENST00000437340 KIAA1109Q2LD37 5005 aa14.69□□□□□ -0.06
CPNE1-216ENST00000437340 C1orf64Q8NEQ6 169 aa14.69□□□□□ -0.06
CPNE1-216ENST00000437340 RPS29P62273 56 aaKnown RBP14.68□□□□□ -0.06
CPNE1-216ENST00000437340 SPAG11AQ6PDA7 123 aa14.68□□□□□ -0.06
CPNE1-216ENST00000437340 LINC00313P59037 77 aa14.66□□□□□ -0.06
CPNE1-216ENST00000437340 PKHD1L1Q86WI1 4243 aa14.66□□□□□ -0.06
CPNE1-216ENST00000437340 FAM229AH3BQW9 127 aa14.65□□□□□ -0.06
CPNE1-216ENST00000437340 LINC00304Q8N9R0 145 aa14.65□□□□□ -0.06
CPNE1-216ENST00000437340 KRTAP17-1Q9BYP8 105 aa14.64□□□□□ -0.07
CPNE1-216ENST00000437340 Q5VSD8 79 aa14.63□□□□□ -0.07
CPNE1-216ENST00000437340 SPANXA2-OT1Q8N9U9 137 aa14.57□□□□□ -0.08
CPNE1-216ENST00000437340 CYP4F30PQ9H0H9 118 aa14.57□□□□□ -0.08
CPNE1-216ENST00000437340 Q8N9P0 234 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-216ENST00000437340 Q8N1X5 172 aa14.5□□□□□ -0.09
CPNE1-216ENST00000437340 KRTAP16-1A8MUX0 517 aa14.49□□□□□ -0.09
CPNE1-216ENST00000437340 KRTAP13-3Q3SY46 172 aa14.49□□□□□ -0.09
CPNE1-216ENST00000437340 SMIM26A0A096LP01 95 aa14.46□□□□□ -0.09
CPNE1-216ENST00000437340 LOC101927531A0A1B0GV80 90 aa14.45□□□□□ -0.1
CPNE1-216ENST00000437340 Q5W150 140 aa14.45□□□□□ -0.1
CPNE1-216ENST00000437340 PRR4Q16378 134 aa14.42□□□□□ -0.1
CPNE1-216ENST00000437340 BIRC6Q9NR09 4857 aa14.41□□□□□ -0.1
CPNE1-216ENST00000437340 IGLV7-46A0A075B6I9 117 aa14.4□□□□□ -0.1
CPNE1-216ENST00000437340 PCOTHQ58A44 107 aa14.38□□□□□ -0.11
CPNE1-216ENST00000437340 LRP1Q07954 4544 aaKnown RBP14.31□□□□□ -0.12
CPNE1-216ENST00000437340 FP248Q71RG6 208 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-216ENST00000437340 FAT3Q8TDW7 4589 aa14.28□□□□□ -0.12
CPNE1-216ENST00000437340 KRTAP4-5Q9BYR2 181 aa14.27□□□□□ -0.12
CPNE1-216ENST00000437340 FLG2Q5D862 2391 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-216ENST00000437340 TNXBP22105 4242 aa14.23□□□□□ -0.13
CPNE1-216ENST00000437340 IGKV2-30P06310 120 aa14.22□□□□□ -0.13
CPNE1-216ENST00000437340 KRTAP10-8P60410 259 aa14.22□□□□□ -0.13
CPNE1-216ENST00000437340 RETNLBQ9BQ08 111 aa14.21□□□□□ -0.13
CPNE1-216ENST00000437340 HERC2O95714 4834 aa14.2□□□□□ -0.14
CPNE1-216ENST00000437340 C4orf26Q17RF5 130 aa14.19□□□□□ -0.14
CPNE1-216ENST00000437340 MYCBP2O75592 4640 aa14.18□□□□□ -0.14
CPNE1-216ENST00000437340 COA5Q86WW8 74 aa14.12□□□□□ -0.15
CPNE1-216ENST00000437340 MPLKIPQ8TAP9 179 aa14.09□□□□□ -0.15
CPNE1-216ENST00000437340 C20orf166-AS1Q96NR2 134 aa14.09□□□□□ -0.15
CPNE1-216ENST00000437340 HRES1P13985 223 aa14.09□□□□□ -0.15
CPNE1-216ENST00000437340 A8MUU9 505 aa14.08□□□□□ -0.16
CPNE1-216ENST00000437340 ABCA13Q86UQ4 5058 aa14.08□□□□□ -0.16
CPNE1-216ENST00000437340 Q1T7F1 81 aa14.07□□□□□ -0.16
CPNE1-216ENST00000437340 C9orf92A6NGG3 77 aa14.06□□□□□ -0.16
CPNE1-216ENST00000437340 MT1HL1P0DM35 61 aa14.05□□□□□ -0.16
CPNE1-216ENST00000437340 IGKV2D-30A0A075B6S6 120 aa14.03□□□□□ -0.16
CPNE1-216ENST00000437340 DMAC1Q96GE9 116 aa13.99□□□□□ -0.17
CPNE1-216ENST00000437340 V9GYY9 64 aa13.99□□□□□ -0.17
CPNE1-216ENST00000437340 ACYP2P14621 99 aa13.97□□□□□ -0.17
CPNE1-216ENST00000437340 C7orf65Q6ZTY9 151 aa13.96□□□□□ -0.18
CPNE1-216ENST00000437340 Q75L30 129 aa13.89□□□□□ -0.19
CPNE1-216ENST00000437340 DMBT1Q9UGM3 2413 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-216ENST00000437340 PSPHP1O15172 72 aa13.76□□□□□ -0.21
CPNE1-216ENST00000437340 CHKB-CPT1BH3BT56 60 aa13.74□□□□□ -0.21
CPNE1-216ENST00000437340 A8MUN3 132 aa13.72□□□□□ -0.21
CPNE1-216ENST00000437340 LINC01558Q9Y6Z2 57 aa13.72□□□□□ -0.21
CPNE1-216ENST00000437340 J3QL48 77 aa13.71□□□□□ -0.22
CPNE1-216ENST00000437340 SPINK7P58062 85 aa13.68□□□□□ -0.22
CPNE1-216ENST00000437340 Q5VV11 94 aa13.66□□□□□ -0.22
CPNE1-216ENST00000437340 PRR15LQ9BU68 103 aa13.66□□□□□ -0.22
CPNE1-216ENST00000437340 PCLOQ9Y6V0 5065 aa13.65□□□□□ -0.22
CPNE1-216ENST00000437340 RPL37P61927 97 aaKnown RBP13.65□□□□□ -0.22
CPNE1-216ENST00000437340 ATP11AUNQ6ZP68 121 aa13.65□□□□□ -0.22
CPNE1-216ENST00000437340 XP32Q5T750 250 aa13.63□□□□□ -0.23
CPNE1-216ENST00000437340 BRK1Q8WUW1 75 aa13.55□□□□□ -0.24
CPNE1-216ENST00000437340 PRO0628Q9UI54 55 aa13.53□□□□□ -0.24
CPNE1-216ENST00000437340 SVIPQ8NHG7 77 aa13.52□□□□□ -0.25
CPNE1-216ENST00000437340 TPRXLQ17RH7 258 aa13.46□□□□□ -0.25
CPNE1-216ENST00000437340 KRTAP3-1Q9BYR8 98 aa13.46□□□□□ -0.25
CPNE1-216ENST00000437340 COX6B2Q6YFQ2 88 aa13.43□□□□□ -0.26
CPNE1-216ENST00000437340 SPTSSBQ8NFR3 76 aa13.38□□□□□ -0.27
CPNE1-216ENST00000437340 A6NED7 52 aa13.35□□□□□ -0.27
CPNE1-216ENST00000437340 A0A1B0GU69 56 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms