RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 TEX15Q9BXT5 2789 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 PRKDCP78527 4128 aaKnown RBP1.33□□□□□ -2.2
ITGB1-206ENST00000437302 GVINP1Q7Z2Y8 2422 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 A0A087WTM6 91 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 TRGV1A0A0A0MS02 117 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 F8WEM9 126 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 H0YGX0 51 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 PRB1P04280 392 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 LINC00158P58513 81 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 ATP5EP2Q5VTU8 51 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 CLPSL2Q6UWE3 100 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 TOMM7Q9P0U1 55 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 DNAH11Q96DT5 4516 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 CACNA1HO95180 2353 aa1.33□□□□□ -2.2
ITGB1-206ENST00000437302 GCN1Q92616 2671 aaKnown RBP1.33□□□□□ -2.2
ITGB1-206ENST00000437302 USP9XQ93008 2570 aaPredicted RBP1.32□□□□□ -2.2
ITGB1-206ENST00000437302 LCE6AA0A183 80 aa1.32□□□□□ -2.2
ITGB1-206ENST00000437302 Q8IZM0 81 aa1.32□□□□□ -2.2
ITGB1-206ENST00000437302 NOP10Q9NPE3 64 aaKnown RBP1.32□□□□□ -2.2
ITGB1-206ENST00000437302 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
ITGB1-206ENST00000437302 ANKRD17O75179 2603 aaKnown RBP1.32□□□□□ -2.2
ITGB1-206ENST00000437302 PTPRZ1P23471 2315 aaPredicted RBP1.32□□□□□ -2.2
ITGB1-206ENST00000437302 ACACAQ13085 2346 aa1.32□□□□□ -2.2
ITGB1-206ENST00000437302 ITPR3Q14573 2671 aa1.32□□□□□ -2.2
ITGB1-206ENST00000437302 MUC6Q6W4X9 2439 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 TENM2Q9NT68 2774 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 EPG5Q9HCE0 2579 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 Q6ZSA8 131 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 SPTAN1Q13813 2472 aaKnown RBP1.31□□□□□ -2.2
ITGB1-206ENST00000437302 NCOR2Q9Y618 2525 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
ITGB1-206ENST00000437302 PKD1L1Q8TDX9 2849 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 DNAH6Q9C0G6 4158 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 SACSQ9NZJ4 4579 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 NBEAL2Q6ZNJ1 2754 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 A0A096LPF7 62 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 ANGP03950 147 aaKnown RBP1.3□□□□□ -2.2
ITGB1-206ENST00000437302 NREPQ16612 68 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 DNAH5Q8TE73 4624 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 DOPEY1Q5JWR5 2465 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 CHD8Q9HCK8 2581 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 SORL1Q92673 2214 aa1.3□□□□□ -2.2
ITGB1-206ENST00000437302 TPRP12270 2363 aaKnown RBP1.29□□□□□ -2.2
ITGB1-206ENST00000437302 POLQO75417 2590 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 GVQW2A0A096LPI5 108 aaPredicted RBP1.29□□□□□ -2.2
ITGB1-206ENST00000437302 HAMPP81172 84 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 SPAG11BQ08648 103 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 COX17Q14061 63 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 UBL5Q9BZL1 73 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 AKAP6Q13023 2319 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 USP9YO00507 2555 aaPredicted RBP1.29□□□□□ -2.2
ITGB1-206ENST00000437302 TENM3Q9P273 2699 aa1.29□□□□□ -2.2
ITGB1-206ENST00000437302 PKD1L2Q7Z442 2459 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 COX7BP24311 80 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 Q96NJ1 140 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 HECTD4Q9Y4D8 3996 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 PTPN13Q12923 2485 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 SPTBN4Q9H254 2564 aa1.28□□□□□ -2.2
ITGB1-206ENST00000437302 CSMD3Q7Z407 3707 aa1.28□□□□□ -2.21
ITGB1-206ENST00000437302 FRAS1Q86XX4 4008 aa1.28□□□□□ -2.21
ITGB1-206ENST00000437302 FLNAP21333 2647 aaKnown RBP1.27□□□□□ -2.21
ITGB1-206ENST00000437302 SPTA1P02549 2419 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 K7EQZ3 153 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 DEFB4AO15263 64 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 DEFB130BP0DP73 79 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 DEFB130AP0DP74 79 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 WFDC10BQ8IUB3 73 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 PLAC4Q8WY50 150 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 PRO0255Q9UI72 69 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 CACNA1AO00555 2505 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 LRRK2Q5S007 2527 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
ITGB1-206ENST00000437302 WNK1Q9H4A3 2382 aa1.27□□□□□ -2.21
ITGB1-206ENST00000437302 PKD1P98161 4303 aa1.26□□□□□ -2.21
ITGB1-206ENST00000437302 SPRR1AP35321 89 aa1.26□□□□□ -2.21
ITGB1-206ENST00000437302 PLAC8Q9NZF1 115 aa1.26□□□□□ -2.21
ITGB1-206ENST00000437302 SRRM2Q9UQ35 2752 aaKnown RBP1.26□□□□□ -2.21
ITGB1-206ENST00000437302 STARD9Q9P2P6 4700 aa1.26□□□□□ -2.21
ITGB1-206ENST00000437302 TLN2Q9Y4G6 2542 aa1.26□□□□□ -2.21
ITGB1-206ENST00000437302 PIEZO1Q92508 2521 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 NBASA2RRP1 2371 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 DEFB135Q30KP9 77 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 LELP1Q5T871 98 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 SPAG11AQ6PDA7 123 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 SPRR4Q96PI1 79 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
ITGB1-206ENST00000437302 CSPG4Q6UVK1 2322 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms