RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
UBXN1-203ENST00000436354 C14orf132Q9NPU4 83 aa9.83□□□□□ -0.84
UBXN1-203ENST00000436354 C21orf62-AS1Q17RA5 79 aa9.82□□□□□ -0.84
UBXN1-203ENST00000436354 A0A087WSZ3 146 aa9.79□□□□□ -0.84
UBXN1-203ENST00000436354 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
UBXN1-203ENST00000436354 A0A1B0GW54 56 aa9.78□□□□□ -0.84
UBXN1-203ENST00000436354 RPL37P61927 97 aaKnown RBP9.76□□□□□ -0.85
UBXN1-203ENST00000436354 C1orf195Q5TG92 126 aa9.76□□□□□ -0.85
UBXN1-203ENST00000436354 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
UBXN1-203ENST00000436354 ETDBQ3ZM63 59 aa9.73□□□□□ -0.85
UBXN1-203ENST00000436354 KRTAP9-7A8MTY7 169 aa9.71□□□□□ -0.86
UBXN1-203ENST00000436354 Q96NJ1 140 aa9.71□□□□□ -0.86
UBXN1-203ENST00000436354 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
UBXN1-203ENST00000436354 FLGP20930 4061 aaPredicted RBP9.69□□□□□ -0.86
UBXN1-203ENST00000436354 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
UBXN1-203ENST00000436354 J3KT08 172 aa9.57□□□□□ -0.88
UBXN1-203ENST00000436354 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
UBXN1-203ENST00000436354 NREPQ16612 68 aa9.57□□□□□ -0.88
UBXN1-203ENST00000436354 SIGMAR1Q99720 223 aa9.55□□□□□ -0.88
UBXN1-203ENST00000436354 LINC00846Q9NV44 126 aa9.55□□□□□ -0.88
UBXN1-203ENST00000436354 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
UBXN1-203ENST00000436354 Q6ZVQ6 151 aa9.54□□□□□ -0.88
UBXN1-203ENST00000436354 FAM240AA0A1B0GVK7 77 aa9.53□□□□□ -0.88
UBXN1-203ENST00000436354 ATP11AUNQ6ZP68 121 aa9.52□□□□□ -0.89
UBXN1-203ENST00000436354 ACYP1P07311 99 aa9.5□□□□□ -0.89
UBXN1-203ENST00000436354 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
UBXN1-203ENST00000436354 KRTAP9-8Q9BYQ0 159 aa9.48□□□□□ -0.89
UBXN1-203ENST00000436354 A0A1B0GVX0 72 aa9.47□□□□□ -0.89
UBXN1-203ENST00000436354 A8MWP4 228 aa9.47□□□□□ -0.89
UBXN1-203ENST00000436354 Q75L30 129 aa9.47□□□□□ -0.89
UBXN1-203ENST00000436354 BPY2O14599 106 aa9.45□□□□□ -0.9
UBXN1-203ENST00000436354 DSCR10P59022 87 aa9.45□□□□□ -0.9
UBXN1-203ENST00000436354 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
UBXN1-203ENST00000436354 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
UBXN1-203ENST00000436354 NDUFB1O75438 58 aa9.43□□□□□ -0.9
UBXN1-203ENST00000436354 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
UBXN1-203ENST00000436354 LINC00313P59037 77 aa9.41□□□□□ -0.9
UBXN1-203ENST00000436354 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
UBXN1-203ENST00000436354 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
UBXN1-203ENST00000436354 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
UBXN1-203ENST00000436354 J3QR89 54 aa9.39□□□□□ -0.91
UBXN1-203ENST00000436354 SSPOA2VEC9 5147 aa9.38□□□□□ -0.91
UBXN1-203ENST00000436354 K7EQZ3 153 aa9.38□□□□□ -0.91
UBXN1-203ENST00000436354 USH2AO75445 5202 aa9.38□□□□□ -0.91
UBXN1-203ENST00000436354 CXCL6P80162 114 aa9.37□□□□□ -0.91
UBXN1-203ENST00000436354 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
UBXN1-203ENST00000436354 C8orf17Q9NRJ1 99 aa9.36□□□□□ -0.91
UBXN1-203ENST00000436354 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
UBXN1-203ENST00000436354 A8MUU9 505 aa9.33□□□□□ -0.92
UBXN1-203ENST00000436354 ATP5EP2Q5VTU8 51 aa9.33□□□□□ -0.92
UBXN1-203ENST00000436354 KRTAP19-1Q8IUB9 90 aa9.31□□□□□ -0.92
UBXN1-203ENST00000436354 Q8N9L7 120 aa9.31□□□□□ -0.92
UBXN1-203ENST00000436354 LINC00643Q86TS7 51 aa9.3□□□□□ -0.92
UBXN1-203ENST00000436354 MT2AP02795 61 aa9.29□□□□□ -0.92
UBXN1-203ENST00000436354 FCGBPQ9Y6R7 5405 aaPredicted RBP9.29□□□□□ -0.92
UBXN1-203ENST00000436354 K7ERU9 68 aa9.28□□□□□ -0.92
UBXN1-203ENST00000436354 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
UBXN1-203ENST00000436354 TMEM254Q8TBM7 123 aa9.26□□□□□ -0.93
UBXN1-203ENST00000436354 hDV103S1A0JD37 113 aa9.25□□□□□ -0.93
UBXN1-203ENST00000436354 LCE2BO14633 110 aa9.25□□□□□ -0.93
UBXN1-203ENST00000436354 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
UBXN1-203ENST00000436354 HCG22E2RYF7 251 aa9.21□□□□□ -0.94
UBXN1-203ENST00000436354 MT1FP04733 61 aa9.21□□□□□ -0.94
UBXN1-203ENST00000436354 FAM236DA0A1B0GTK5 79 aa9.2□□□□□ -0.94
UBXN1-203ENST00000436354 FAM236CP0DP71 79 aa9.2□□□□□ -0.94
UBXN1-203ENST00000436354 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
UBXN1-203ENST00000436354 KRTAP9-3Q9BYQ3 159 aa9.19□□□□□ -0.94
UBXN1-203ENST00000436354 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
UBXN1-203ENST00000436354 WFDC13Q8IUB5 93 aa9.18□□□□□ -0.94
UBXN1-203ENST00000436354 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
UBXN1-203ENST00000436354 ZCCHC13Q8WW36 166 aaKnown RBP9.12□□□□□ -0.95
UBXN1-203ENST00000436354 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
UBXN1-203ENST00000436354 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
UBXN1-203ENST00000436354 A0A087WVE0 104 aa9.08□□□□□ -0.96
UBXN1-203ENST00000436354 NDUFS5O43920 106 aa9.08□□□□□ -0.96
UBXN1-203ENST00000436354 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
UBXN1-203ENST00000436354 HRES1P13985 223 aa9.05□□□□□ -0.96
UBXN1-203ENST00000436354 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
UBXN1-203ENST00000436354 MT-ATP8P03928 68 aa9.04□□□□□ -0.96
UBXN1-203ENST00000436354 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
UBXN1-203ENST00000436354 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
UBXN1-203ENST00000436354 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
UBXN1-203ENST00000436354 Q5W150 140 aa9□□□□□ -0.97
UBXN1-203ENST00000436354 SPINK7P58062 85 aa8.92□□□□□ -0.98
UBXN1-203ENST00000436354 UQCRQO14949 82 aa8.9□□□□□ -0.98
UBXN1-203ENST00000436354 KRTAP6-3Q3LI67 103 aa8.9□□□□□ -0.98
UBXN1-203ENST00000436354 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
UBXN1-203ENST00000436354 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
UBXN1-203ENST00000436354 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
UBXN1-203ENST00000436354 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
UBXN1-203ENST00000436354 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
UBXN1-203ENST00000436354 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
UBXN1-203ENST00000436354 IGKV2D-30A0A075B6S6 120 aa8.83□□□□□ -1
UBXN1-203ENST00000436354 SCGB1A1P11684 91 aa8.81□□□□□ -1
UBXN1-203ENST00000436354 ATOX1O00244 68 aa8.8□□□□□ -1
UBXN1-203ENST00000436354 H0Y9P7 68 aa8.79□□□□□ -1
UBXN1-203ENST00000436354 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
UBXN1-203ENST00000436354 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
UBXN1-203ENST00000436354 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
UBXN1-203ENST00000436354 CYP4F30PQ9H0H9 118 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms