RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 SETXQ7Z333 2677 aaKnown RBP0.89□□□□□ -2.27
HMGB3P10-201ENST00000434734 CLPSL2Q6UWE3 100 aa0.89□□□□□ -2.27
HMGB3P10-201ENST00000434734 NAV2Q8IVL1 2488 aa0.89□□□□□ -2.27
HMGB3P10-201ENST00000434734 MYCBP2O75592 4640 aa0.88□□□□□ -2.27
HMGB3P10-201ENST00000434734 LRP1Q07954 4544 aaKnown RBP0.87□□□□□ -2.27
HMGB3P10-201ENST00000434734 USP24Q9UPU5 2620 aa0.87□□□□□ -2.27
HMGB3P10-201ENST00000434734 H3BNG1 76 aa0.86□□□□□ -2.27
HMGB3P10-201ENST00000434734 RPL39LQ96EH5 51 aaKnown RBP0.86□□□□□ -2.27
HMGB3P10-201ENST00000434734 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.27
HMGB3P10-201ENST00000434734 COL6A5A8TX70 2615 aa0.84□□□□□ -2.27
HMGB3P10-201ENST00000434734 A8MTW9 85 aa0.84□□□□□ -2.27
HMGB3P10-201ENST00000434734 NF1P21359 2839 aa0.84□□□□□ -2.28
HMGB3P10-201ENST00000434734 ACACAQ13085 2346 aa0.83□□□□□ -2.28
HMGB3P10-201ENST00000434734 SACSQ9NZJ4 4579 aa0.83□□□□□ -2.28
HMGB3P10-201ENST00000434734 NCOR2Q9Y618 2525 aa0.82□□□□□ -2.28
HMGB3P10-201ENST00000434734 C9orf92A6NGG3 77 aa0.82□□□□□ -2.28
HMGB3P10-201ENST00000434734 VPS13BQ7Z7G8 4022 aa0.82□□□□□ -2.28
HMGB3P10-201ENST00000434734 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 GCN1Q92616 2671 aaKnown RBP0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 SPRR2DP22532 72 aa0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 LEAP2Q969E1 77 aa0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 NSD1Q96L73 2696 aaPredicted RBP0.81□□□□□ -2.28
HMGB3P10-201ENST00000434734 ZZEF1O43149 2961 aa0.8□□□□□ -2.28
HMGB3P10-201ENST00000434734 M0QZ58 72 aa0.79□□□□□ -2.28
HMGB3P10-201ENST00000434734 HRNRQ86YZ3 2850 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P10-201ENST00000434734 STAB1Q9NY15 2570 aa0.79□□□□□ -2.28
HMGB3P10-201ENST00000434734 DNAH11Q96DT5 4516 aa0.79□□□□□ -2.28
HMGB3P10-201ENST00000434734 FLNCQ14315 2725 aa0.77□□□□□ -2.29
HMGB3P10-201ENST00000434734 COL7A1Q02388 2944 aa0.77□□□□□ -2.29
HMGB3P10-201ENST00000434734 DMXL1Q9Y485 3027 aa0.76□□□□□ -2.29
HMGB3P10-201ENST00000434734 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
HMGB3P10-201ENST00000434734 SPTBN4Q9H254 2564 aa0.76□□□□□ -2.29
HMGB3P10-201ENST00000434734 FLNBO75369 2602 aaKnown RBP0.76□□□□□ -2.29
HMGB3P10-201ENST00000434734 LPAP08519 4548 aa0.75□□□□□ -2.29
HMGB3P10-201ENST00000434734 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
HMGB3P10-201ENST00000434734 CACNA1AO00555 2505 aa0.75□□□□□ -2.29
HMGB3P10-201ENST00000434734 MTORP42345 2549 aa0.75□□□□□ -2.29
HMGB3P10-201ENST00000434734 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
HMGB3P10-201ENST00000434734 PKD1P98161 4303 aa0.74□□□□□ -2.29
HMGB3P10-201ENST00000434734 TNP1P09430 55 aa0.74□□□□□ -2.29
HMGB3P10-201ENST00000434734 LRRK2Q5S007 2527 aa0.73□□□□□ -2.29
HMGB3P10-201ENST00000434734 CUBNO60494 3623 aa0.73□□□□□ -2.29
HMGB3P10-201ENST00000434734 RIF1Q5UIP0 2472 aaKnown RBP0.73□□□□□ -2.29
HMGB3P10-201ENST00000434734 IGSF10Q6WRI0 2623 aa0.73□□□□□ -2.29
HMGB3P10-201ENST00000434734 DEFB110Q30KQ9 67 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 ARHGAP5-AS1Q96IT6 56 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 DCHS2Q6V1P9 2916 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 VPS13DQ5THJ4 4388 aa0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 SONP18583 2426 aaKnown RBP0.72□□□□□ -2.29
HMGB3P10-201ENST00000434734 HSPG2P98160 4391 aa0.71□□□□□ -2.3
HMGB3P10-201ENST00000434734 SPRR2BP35325 72 aa0.71□□□□□ -2.3
HMGB3P10-201ENST00000434734 CCDC168Q8NDH2 2452 aa0.7□□□□□ -2.3
HMGB3P10-201ENST00000434734 SPG11Q96JI7 2443 aa0.69□□□□□ -2.3
HMGB3P10-201ENST00000434734 TACC2O95359 2948 aa0.69□□□□□ -2.3
HMGB3P10-201ENST00000434734 ANKHD1Q8IWZ3 2542 aaKnown RBP0.68□□□□□ -2.3
HMGB3P10-201ENST00000434734 FAM186AA6NE01 2351 aa0.68□□□□□ -2.3
HMGB3P10-201ENST00000434734 NBEAL2Q6ZNJ1 2754 aa0.68□□□□□ -2.3
HMGB3P10-201ENST00000434734 ANK3Q12955 4377 aaKnown RBP0.67□□□□□ -2.3
HMGB3P10-201ENST00000434734 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
HMGB3P10-201ENST00000434734 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
HMGB3P10-201ENST00000434734 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
HMGB3P10-201ENST00000434734 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
HMGB3P10-201ENST00000434734 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.3
HMGB3P10-201ENST00000434734 TENM2Q9NT68 2774 aa0.65□□□□□ -2.3
HMGB3P10-201ENST00000434734 SPENQ96T58 3664 aaKnown RBP0.65□□□□□ -2.31
HMGB3P10-201ENST00000434734 PKHD1L1Q86WI1 4243 aa0.65□□□□□ -2.31
HMGB3P10-201ENST00000434734 DNAH3Q8TD57 4116 aa0.65□□□□□ -2.31
HMGB3P10-201ENST00000434734 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
HMGB3P10-201ENST00000434734 COL12A1Q99715 3063 aa0.64□□□□□ -2.31
HMGB3P10-201ENST00000434734 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
HMGB3P10-201ENST00000434734 LRP1BQ9NZR2 4599 aa0.64□□□□□ -2.31
HMGB3P10-201ENST00000434734 HECTD4Q9Y4D8 3996 aa0.63□□□□□ -2.31
HMGB3P10-201ENST00000434734 EPG5Q9HCE0 2579 aa0.62□□□□□ -2.31
HMGB3P10-201ENST00000434734 ACACBO00763 2458 aa0.62□□□□□ -2.31
HMGB3P10-201ENST00000434734 DEFB104AQ8WTQ1 72 aa0.62□□□□□ -2.31
HMGB3P10-201ENST00000434734 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
HMGB3P10-201ENST00000434734 FLGP20930 4061 aaPredicted RBP0.61□□□□□ -2.31
HMGB3P10-201ENST00000434734 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
HMGB3P10-201ENST00000434734 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
HMGB3P10-201ENST00000434734 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
HMGB3P10-201ENST00000434734 ANKRD11Q6UB99 2663 aaPredicted RBP0.6□□□□□ -2.31
HMGB3P10-201ENST00000434734 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
HMGB3P10-201ENST00000434734 TTTY10Q9BZA0 68 aa0.59□□□□□ -2.31
HMGB3P10-201ENST00000434734 SVEP1Q4LDE5 3571 aa0.59□□□□□ -2.32
HMGB3P10-201ENST00000434734 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
HMGB3P10-201ENST00000434734 KALRNO60229 2985 aa0.58□□□□□ -2.32
HMGB3P10-201ENST00000434734 APOBP04114 4563 aaKnown RBP0.58□□□□□ -2.32
HMGB3P10-201ENST00000434734 MYO18BQ8IUG5 2567 aa0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 SPART-AS1P0CW21 52 aa0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 LINC01590Q5TEZ4 76 aa0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
HMGB3P10-201ENST00000434734 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
HMGB3P10-201ENST00000434734 SPRR2AP35326 72 aa0.56□□□□□ -2.32
HMGB3P10-201ENST00000434734 NBEAQ8NFP9 2946 aa0.56□□□□□ -2.32
HMGB3P10-201ENST00000434734 MAST4O15021 2626 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms