RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 IGFL1Q6UW32 110 aa4.05□□□□□ -1.76
GTF2A1-202ENST00000434192 SS18L2Q9UHA2 77 aa4.05□□□□□ -1.76
GTF2A1-202ENST00000434192 TNXBP22105 4242 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 LRP1Q07954 4544 aaKnown RBP4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 OXTP01178 125 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 CCKP06307 115 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 Q6ZQT0 140 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 SSBP3-AS1Q7Z2R9 100 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
GTF2A1-202ENST00000434192 J3QR89 54 aa4.03□□□□□ -1.76
GTF2A1-202ENST00000434192 HERC1Q15751 4861 aa4.03□□□□□ -1.76
GTF2A1-202ENST00000434192 Q6Q795 121 aa4.01□□□□□ -1.77
GTF2A1-202ENST00000434192 A0A0G2JQZ4 141 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 FAM240AA0A1B0GVK7 77 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 A0A1B0GW54 56 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 A0A1W2PNM2 257 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 CD164Q04900 197 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
GTF2A1-202ENST00000434192 A0A087WSZ3 146 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 TRBV7-7A0A0K0K1E9 115 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 ACYP1P07311 99 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 SPAG11AQ6PDA7 123 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 HRCT1Q6UXD1 115 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 SMIM20Q8N5G0 67 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 LIMD2Q9BT23 127 aa3.99□□□□□ -1.77
GTF2A1-202ENST00000434192 SPINK1P00995 79 aa3.98□□□□□ -1.77
GTF2A1-202ENST00000434192 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
GTF2A1-202ENST00000434192 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
GTF2A1-202ENST00000434192 C5orf47Q569G3 176 aa3.97□□□□□ -1.77
GTF2A1-202ENST00000434192 UBL5Q9BZL1 73 aa3.97□□□□□ -1.77
GTF2A1-202ENST00000434192 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
GTF2A1-202ENST00000434192 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
GTF2A1-202ENST00000434192 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
GTF2A1-202ENST00000434192 NREPQ16612 68 aa3.94□□□□□ -1.78
GTF2A1-202ENST00000434192 Q5XG85 94 aa3.94□□□□□ -1.78
GTF2A1-202ENST00000434192 Q6ZVQ6 151 aa3.94□□□□□ -1.78
GTF2A1-202ENST00000434192 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
GTF2A1-202ENST00000434192 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
GTF2A1-202ENST00000434192 SEC61BP60468 96 aaKnown RBP3.92□□□□□ -1.78
GTF2A1-202ENST00000434192 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
GTF2A1-202ENST00000434192 ATP5EP2Q5VTU8 51 aa3.92□□□□□ -1.78
GTF2A1-202ENST00000434192 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
GTF2A1-202ENST00000434192 BPY2O14599 106 aa3.91□□□□□ -1.78
GTF2A1-202ENST00000434192 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
GTF2A1-202ENST00000434192 J3KT08 172 aa3.9□□□□□ -1.79
GTF2A1-202ENST00000434192 LINC00643Q86TS7 51 aa3.9□□□□□ -1.79
GTF2A1-202ENST00000434192 Q96NJ1 140 aa3.9□□□□□ -1.79
GTF2A1-202ENST00000434192 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
GTF2A1-202ENST00000434192 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 CXCL6P80162 114 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 DEFB116Q30KQ4 102 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 C1orf195Q5TG92 126 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
GTF2A1-202ENST00000434192 IGKV3D-7A0A0C4DH55 119 aa3.87□□□□□ -1.79
GTF2A1-202ENST00000434192 A8MWP4 228 aa3.87□□□□□ -1.79
GTF2A1-202ENST00000434192 NDUFB1O75438 58 aa3.87□□□□□ -1.79
GTF2A1-202ENST00000434192 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
GTF2A1-202ENST00000434192 K7EQZ3 153 aa3.86□□□□□ -1.79
GTF2A1-202ENST00000434192 DSCR10P59022 87 aa3.86□□□□□ -1.79
GTF2A1-202ENST00000434192 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
GTF2A1-202ENST00000434192 A0A1B0GVX0 72 aa3.85□□□□□ -1.79
GTF2A1-202ENST00000434192 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
GTF2A1-202ENST00000434192 Q8N9L7 120 aa3.84□□□□□ -1.79
GTF2A1-202ENST00000434192 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
GTF2A1-202ENST00000434192 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
GTF2A1-202ENST00000434192 PRR15Q8IV56 129 aa3.83□□□□□ -1.8
GTF2A1-202ENST00000434192 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
GTF2A1-202ENST00000434192 PRR4Q16378 134 aa3.82□□□□□ -1.8
GTF2A1-202ENST00000434192 IMUPQ9GZP8 106 aa3.82□□□□□ -1.8
GTF2A1-202ENST00000434192 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
GTF2A1-202ENST00000434192 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
GTF2A1-202ENST00000434192 HCG22E2RYF7 251 aa3.81□□□□□ -1.8
GTF2A1-202ENST00000434192 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
GTF2A1-202ENST00000434192 LRP2P98164 4655 aa3.8□□□□□ -1.8
GTF2A1-202ENST00000434192 A0A087WVE0 104 aa3.8□□□□□ -1.8
GTF2A1-202ENST00000434192 LINC00313P59037 77 aa3.8□□□□□ -1.8
GTF2A1-202ENST00000434192 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
GTF2A1-202ENST00000434192 C9orf92A6NGG3 77 aa3.79□□□□□ -1.8
GTF2A1-202ENST00000434192 CASC2Q6XLA1 102 aa3.79□□□□□ -1.8
GTF2A1-202ENST00000434192 WFDC13Q8IUB5 93 aa3.79□□□□□ -1.8
GTF2A1-202ENST00000434192 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
GTF2A1-202ENST00000434192 TPRXLQ17RH7 258 aa3.78□□□□□ -1.8
GTF2A1-202ENST00000434192 TMEM254Q8TBM7 123 aa3.78□□□□□ -1.8
GTF2A1-202ENST00000434192 LPAP08519 4548 aa3.77□□□□□ -1.81
GTF2A1-202ENST00000434192 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
GTF2A1-202ENST00000434192 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
GTF2A1-202ENST00000434192 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
GTF2A1-202ENST00000434192 MRPL34Q9BQ48 92 aaKnown RBP3.77□□□□□ -1.81
GTF2A1-202ENST00000434192 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
GTF2A1-202ENST00000434192 SEC61GP60059 68 aa3.76□□□□□ -1.81
GTF2A1-202ENST00000434192 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
GTF2A1-202ENST00000434192 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
GTF2A1-202ENST00000434192 NDUFS5O43920 106 aa3.75□□□□□ -1.81
GTF2A1-202ENST00000434192 C4orf26Q17RF5 130 aa3.74□□□□□ -1.81
GTF2A1-202ENST00000434192 ATOX1O00244 68 aa3.73□□□□□ -1.81
GTF2A1-202ENST00000434192 A8MUU9 505 aa3.72□□□□□ -1.81
GTF2A1-202ENST00000434192 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
GTF2A1-202ENST00000434192 Q75L30 129 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms