RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 MPLKIPQ8TAP9 179 aa8.12□□□□□ -1.11
RTN1-204ENST00000432103 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
RTN1-204ENST00000432103 DSCR10P59022 87 aa8.11□□□□□ -1.11
RTN1-204ENST00000432103 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
RTN1-204ENST00000432103 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
RTN1-204ENST00000432103 A0A0G2JQZ4 141 aa8.09□□□□□ -1.11
RTN1-204ENST00000432103 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
RTN1-204ENST00000432103 A0A087WSZ3 146 aa8.08□□□□□ -1.12
RTN1-204ENST00000432103 NDUFB1O75438 58 aa8.08□□□□□ -1.12
RTN1-204ENST00000432103 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
RTN1-204ENST00000432103 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
RTN1-204ENST00000432103 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
RTN1-204ENST00000432103 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
RTN1-204ENST00000432103 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
RTN1-204ENST00000432103 K7EQZ3 153 aa8.05□□□□□ -1.12
RTN1-204ENST00000432103 RYR1P21817 5038 aa8.05□□□□□ -1.12
RTN1-204ENST00000432103 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
RTN1-204ENST00000432103 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
RTN1-204ENST00000432103 SPINK1P00995 79 aa8.03□□□□□ -1.12
RTN1-204ENST00000432103 V9GYY9 64 aa8.02□□□□□ -1.13
RTN1-204ENST00000432103 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
RTN1-204ENST00000432103 HSPG2P98160 4391 aa8.01□□□□□ -1.13
RTN1-204ENST00000432103 RPS29P62273 56 aaKnown RBP8.01□□□□□ -1.13
RTN1-204ENST00000432103 FAT1Q14517 4588 aa8□□□□□ -1.13
RTN1-204ENST00000432103 H3BPC8 53 aa8□□□□□ -1.13
RTN1-204ENST00000432103 MP68P56378 58 aa7.99□□□□□ -1.13
RTN1-204ENST00000432103 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
RTN1-204ENST00000432103 HERC2O95714 4834 aa7.99□□□□□ -1.13
RTN1-204ENST00000432103 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
RTN1-204ENST00000432103 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
RTN1-204ENST00000432103 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.13
RTN1-204ENST00000432103 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
RTN1-204ENST00000432103 KRTAP17-1Q9BYP8 105 aa7.96□□□□□ -1.14
RTN1-204ENST00000432103 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.14
RTN1-204ENST00000432103 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
RTN1-204ENST00000432103 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.14
RTN1-204ENST00000432103 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.15
RTN1-204ENST00000432103 Q96NJ1 140 aa7.9□□□□□ -1.15
RTN1-204ENST00000432103 DEFB116Q30KQ4 102 aa7.89□□□□□ -1.15
RTN1-204ENST00000432103 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
RTN1-204ENST00000432103 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
RTN1-204ENST00000432103 A8MWP4 228 aa7.88□□□□□ -1.15
RTN1-204ENST00000432103 PSPHP1O15172 72 aa7.88□□□□□ -1.15
RTN1-204ENST00000432103 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
RTN1-204ENST00000432103 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
RTN1-204ENST00000432103 H0Y9P7 68 aa7.87□□□□□ -1.15
RTN1-204ENST00000432103 SEC61GP60059 68 aa7.86□□□□□ -1.15
RTN1-204ENST00000432103 PRR4Q16378 134 aa7.85□□□□□ -1.15
RTN1-204ENST00000432103 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
RTN1-204ENST00000432103 A8MUN3 132 aa7.84□□□□□ -1.15
RTN1-204ENST00000432103 Q5VV11 94 aa7.84□□□□□ -1.15
RTN1-204ENST00000432103 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.16
RTN1-204ENST00000432103 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
RTN1-204ENST00000432103 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
RTN1-204ENST00000432103 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
RTN1-204ENST00000432103 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
RTN1-204ENST00000432103 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
RTN1-204ENST00000432103 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
RTN1-204ENST00000432103 Q75L30 129 aa7.77□□□□□ -1.17
RTN1-204ENST00000432103 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
RTN1-204ENST00000432103 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
RTN1-204ENST00000432103 J3QL48 77 aa7.76□□□□□ -1.17
RTN1-204ENST00000432103 ABCA13Q86UQ4 5058 aa7.76□□□□□ -1.17
RTN1-204ENST00000432103 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
RTN1-204ENST00000432103 CHKB-CPT1BH3BT56 60 aa7.75□□□□□ -1.17
RTN1-204ENST00000432103 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
RTN1-204ENST00000432103 LINC00313P59037 77 aa7.73□□□□□ -1.17
RTN1-204ENST00000432103 COA5Q86WW8 74 aa7.73□□□□□ -1.17
RTN1-204ENST00000432103 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
RTN1-204ENST00000432103 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
RTN1-204ENST00000432103 LRP1Q07954 4544 aaKnown RBP7.7□□□□□ -1.18
RTN1-204ENST00000432103 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
RTN1-204ENST00000432103 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
RTN1-204ENST00000432103 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
RTN1-204ENST00000432103 TNXBP22105 4242 aa7.67□□□□□ -1.18
RTN1-204ENST00000432103 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
RTN1-204ENST00000432103 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
RTN1-204ENST00000432103 CDC42SE1Q9NRR8 79 aa7.66□□□□□ -1.18
RTN1-204ENST00000432103 A8MU10 97 aa7.65□□□□□ -1.18
RTN1-204ENST00000432103 LCA10Q71F78 164 aa7.65□□□□□ -1.18
RTN1-204ENST00000432103 MYCBP2O75592 4640 aa7.65□□□□□ -1.19
RTN1-204ENST00000432103 NDUFS5O43920 106 aa7.64□□□□□ -1.19
RTN1-204ENST00000432103 A6NED7 52 aa7.64□□□□□ -1.19
RTN1-204ENST00000432103 NOTCH2NLQ7Z3S9 236 aa7.64□□□□□ -1.19
RTN1-204ENST00000432103 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
RTN1-204ENST00000432103 A6NN06 94 aa7.6□□□□□ -1.19
RTN1-204ENST00000432103 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
RTN1-204ENST00000432103 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
RTN1-204ENST00000432103 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
RTN1-204ENST00000432103 SPTSSBQ8NFR3 76 aa7.57□□□□□ -1.2
RTN1-204ENST00000432103 HRES1P13985 223 aa7.56□□□□□ -1.2
RTN1-204ENST00000432103 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
RTN1-204ENST00000432103 HERC1Q15751 4861 aa7.54□□□□□ -1.2
RTN1-204ENST00000432103 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
RTN1-204ENST00000432103 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.2
RTN1-204ENST00000432103 A8MUU9 505 aa7.51□□□□□ -1.21
RTN1-204ENST00000432103 C7orf65Q6ZTY9 151 aa7.5□□□□□ -1.21
RTN1-204ENST00000432103 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
RTN1-204ENST00000432103 SPINK7P58062 85 aa7.46□□□□□ -1.21
RTN1-204ENST00000432103 ACYP2P14621 99 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms