RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
CSTF3-202ENST00000431742 F8W1H4 67 aa7.83□□□□□ -1.16
CSTF3-202ENST00000431742 IGKV4-1P06312 121 aa7.82□□□□□ -1.16
CSTF3-202ENST00000431742 SIGMAR1Q99720 223 aa7.82□□□□□ -1.16
CSTF3-202ENST00000431742 DEFB116Q30KQ4 102 aa7.81□□□□□ -1.16
CSTF3-202ENST00000431742 J3KT08 172 aa7.77□□□□□ -1.17
CSTF3-202ENST00000431742 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
CSTF3-202ENST00000431742 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
CSTF3-202ENST00000431742 MUC2Q02817 5179 aa7.76□□□□□ -1.17
CSTF3-202ENST00000431742 ETDBQ3ZM63 59 aa7.76□□□□□ -1.17
CSTF3-202ENST00000431742 A0A1B0GV90 55 aa7.75□□□□□ -1.17
CSTF3-202ENST00000431742 RPL37P61927 97 aaKnown RBP7.75□□□□□ -1.17
CSTF3-202ENST00000431742 DSCR10P59022 87 aa7.74□□□□□ -1.17
CSTF3-202ENST00000431742 NREPQ16612 68 aa7.74□□□□□ -1.17
CSTF3-202ENST00000431742 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
CSTF3-202ENST00000431742 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
CSTF3-202ENST00000431742 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
CSTF3-202ENST00000431742 LINC00313P59037 77 aa7.71□□□□□ -1.18
CSTF3-202ENST00000431742 Q75L30 129 aa7.71□□□□□ -1.18
CSTF3-202ENST00000431742 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
CSTF3-202ENST00000431742 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
CSTF3-202ENST00000431742 A8MWP4 228 aa7.7□□□□□ -1.18
CSTF3-202ENST00000431742 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
CSTF3-202ENST00000431742 A8MUU9 505 aa7.69□□□□□ -1.18
CSTF3-202ENST00000431742 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
CSTF3-202ENST00000431742 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
CSTF3-202ENST00000431742 Q6ZVQ6 151 aa7.69□□□□□ -1.18
CSTF3-202ENST00000431742 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
CSTF3-202ENST00000431742 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
CSTF3-202ENST00000431742 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
CSTF3-202ENST00000431742 NDUFB1O75438 58 aa7.67□□□□□ -1.18
CSTF3-202ENST00000431742 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
CSTF3-202ENST00000431742 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
CSTF3-202ENST00000431742 BPY2O14599 106 aa7.63□□□□□ -1.19
CSTF3-202ENST00000431742 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
CSTF3-202ENST00000431742 K7EQZ3 153 aa7.62□□□□□ -1.19
CSTF3-202ENST00000431742 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
CSTF3-202ENST00000431742 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.19
CSTF3-202ENST00000431742 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
CSTF3-202ENST00000431742 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
CSTF3-202ENST00000431742 ACYP1P07311 99 aa7.57□□□□□ -1.2
CSTF3-202ENST00000431742 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
CSTF3-202ENST00000431742 Q8N9L7 120 aa7.56□□□□□ -1.2
CSTF3-202ENST00000431742 Q8N9P0 234 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-202ENST00000431742 TMEM254Q8TBM7 123 aa7.54□□□□□ -1.2
CSTF3-202ENST00000431742 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
CSTF3-202ENST00000431742 CXCL6P80162 114 aa7.52□□□□□ -1.21
CSTF3-202ENST00000431742 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
CSTF3-202ENST00000431742 MRPL34Q9BQ48 92 aaKnown RBP7.51□□□□□ -1.21
CSTF3-202ENST00000431742 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
CSTF3-202ENST00000431742 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
CSTF3-202ENST00000431742 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
CSTF3-202ENST00000431742 ZCCHC13Q8WW36 166 aaKnown RBP7.48□□□□□ -1.21
CSTF3-202ENST00000431742 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
CSTF3-202ENST00000431742 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.22
CSTF3-202ENST00000431742 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
CSTF3-202ENST00000431742 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
CSTF3-202ENST00000431742 H3BS24 57 aa7.42□□□□□ -1.22
CSTF3-202ENST00000431742 J3QR89 54 aa7.41□□□□□ -1.22
CSTF3-202ENST00000431742 LINC00643Q86TS7 51 aa7.41□□□□□ -1.22
CSTF3-202ENST00000431742 NDUFS5O43920 106 aa7.39□□□□□ -1.23
CSTF3-202ENST00000431742 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
CSTF3-202ENST00000431742 HRES1P13985 223 aa7.36□□□□□ -1.23
CSTF3-202ENST00000431742 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
CSTF3-202ENST00000431742 SPINK7P58062 85 aa7.34□□□□□ -1.23
CSTF3-202ENST00000431742 Q5W150 140 aa7.34□□□□□ -1.23
CSTF3-202ENST00000431742 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
CSTF3-202ENST00000431742 HIST1H4AP62805 103 aaKnown RBP7.32□□□□□ -1.24
CSTF3-202ENST00000431742 MT1HP80294 61 aa7.3□□□□□ -1.24
CSTF3-202ENST00000431742 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
CSTF3-202ENST00000431742 K7ERU9 68 aa7.29□□□□□ -1.24
CSTF3-202ENST00000431742 A0A087WVE0 104 aa7.28□□□□□ -1.24
CSTF3-202ENST00000431742 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
CSTF3-202ENST00000431742 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
CSTF3-202ENST00000431742 RBM12B-AS1Q9P1G2 102 aa7.25□□□□□ -1.25
CSTF3-202ENST00000431742 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
CSTF3-202ENST00000431742 IGKV2D-30A0A075B6S6 120 aa7.23□□□□□ -1.25
CSTF3-202ENST00000431742 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
CSTF3-202ENST00000431742 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
CSTF3-202ENST00000431742 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
CSTF3-202ENST00000431742 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
CSTF3-202ENST00000431742 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
CSTF3-202ENST00000431742 UQCRQO14949 82 aa7.16□□□□□ -1.26
CSTF3-202ENST00000431742 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
CSTF3-202ENST00000431742 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
CSTF3-202ENST00000431742 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
CSTF3-202ENST00000431742 M0R2T5 61 aa7.12□□□□□ -1.27
CSTF3-202ENST00000431742 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
CSTF3-202ENST00000431742 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
CSTF3-202ENST00000431742 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
CSTF3-202ENST00000431742 H0Y9P7 68 aa7.1□□□□□ -1.27
CSTF3-202ENST00000431742 ATOX1O00244 68 aa7.09□□□□□ -1.27
CSTF3-202ENST00000431742 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.27
CSTF3-202ENST00000431742 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
CSTF3-202ENST00000431742 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
CSTF3-202ENST00000431742 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
CSTF3-202ENST00000431742 SCGB1A1P11684 91 aa7.03□□□□□ -1.28
CSTF3-202ENST00000431742 FAM236AA0A1B0GUQ0 79 aa7.02□□□□□ -1.29
CSTF3-202ENST00000431742 FAM236BA0A1B0GV22 79 aa7.02□□□□□ -1.29
CSTF3-202ENST00000431742 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms