RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
LINC00840-201ENST00000431737 H3BPC8 53 aa7.35□□□□□ -1.23
LINC00840-201ENST00000431737 H3BS24 57 aa7.35□□□□□ -1.23
LINC00840-201ENST00000431737 CDK2AP2O75956 126 aa7.35□□□□□ -1.23
LINC00840-201ENST00000431737 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
LINC00840-201ENST00000431737 MP68P56378 58 aa7.33□□□□□ -1.24
LINC00840-201ENST00000431737 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
LINC00840-201ENST00000431737 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
LINC00840-201ENST00000431737 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
LINC00840-201ENST00000431737 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
LINC00840-201ENST00000431737 H0Y9P7 68 aa7.3□□□□□ -1.24
LINC00840-201ENST00000431737 OXTP01178 125 aa7.29□□□□□ -1.24
LINC00840-201ENST00000431737 MRPL34Q9BQ48 92 aaKnown RBP7.29□□□□□ -1.24
LINC00840-201ENST00000431737 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
LINC00840-201ENST00000431737 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
LINC00840-201ENST00000431737 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
LINC00840-201ENST00000431737 PLA2G1BP04054 148 aaKnown RBP7.29□□□□□ -1.24
LINC00840-201ENST00000431737 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
LINC00840-201ENST00000431737 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
LINC00840-201ENST00000431737 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
LINC00840-201ENST00000431737 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
LINC00840-201ENST00000431737 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
LINC00840-201ENST00000431737 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
LINC00840-201ENST00000431737 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
LINC00840-201ENST00000431737 SPINK1P00995 79 aa7.24□□□□□ -1.25
LINC00840-201ENST00000431737 C1orf64Q8NEQ6 169 aa7.23□□□□□ -1.25
LINC00840-201ENST00000431737 PKHD1L1Q86WI1 4243 aa7.23□□□□□ -1.25
LINC00840-201ENST00000431737 FAT1Q14517 4588 aa7.23□□□□□ -1.25
LINC00840-201ENST00000431737 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
LINC00840-201ENST00000431737 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
LINC00840-201ENST00000431737 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
LINC00840-201ENST00000431737 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
LINC00840-201ENST00000431737 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
LINC00840-201ENST00000431737 PRR26Q8N8Z3 221 aa7.19□□□□□ -1.26
LINC00840-201ENST00000431737 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
LINC00840-201ENST00000431737 NDUFS5O43920 106 aa7.19□□□□□ -1.26
LINC00840-201ENST00000431737 LINC00313P59037 77 aa7.19□□□□□ -1.26
LINC00840-201ENST00000431737 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
LINC00840-201ENST00000431737 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
LINC00840-201ENST00000431737 RYR3Q15413 4870 aa7.16□□□□□ -1.26
LINC00840-201ENST00000431737 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
LINC00840-201ENST00000431737 LOC101927531A0A1B0GV80 90 aa7.13□□□□□ -1.27
LINC00840-201ENST00000431737 Q5W150 140 aa7.13□□□□□ -1.27
LINC00840-201ENST00000431737 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
LINC00840-201ENST00000431737 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
LINC00840-201ENST00000431737 RYR1P21817 5038 aa7.1□□□□□ -1.27
LINC00840-201ENST00000431737 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
LINC00840-201ENST00000431737 HSPG2P98160 4391 aa7.09□□□□□ -1.28
LINC00840-201ENST00000431737 PRR4Q16378 134 aa7.08□□□□□ -1.28
LINC00840-201ENST00000431737 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
LINC00840-201ENST00000431737 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
LINC00840-201ENST00000431737 Q5VSD8 79 aa7.02□□□□□ -1.29
LINC00840-201ENST00000431737 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
LINC00840-201ENST00000431737 C4orf26Q17RF5 130 aa7□□□□□ -1.29
LINC00840-201ENST00000431737 V9GYY9 64 aa7□□□□□ -1.29
LINC00840-201ENST00000431737 TNXBP22105 4242 aa6.99□□□□□ -1.29
LINC00840-201ENST00000431737 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
LINC00840-201ENST00000431737 Q1T7F1 81 aa6.97□□□□□ -1.29
LINC00840-201ENST00000431737 COA5Q86WW8 74 aa6.97□□□□□ -1.29
LINC00840-201ENST00000431737 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
LINC00840-201ENST00000431737 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
LINC00840-201ENST00000431737 C20orf166-AS1Q96NR2 134 aa6.95□□□□□ -1.3
LINC00840-201ENST00000431737 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
LINC00840-201ENST00000431737 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
LINC00840-201ENST00000431737 A8MUU9 505 aa6.95□□□□□ -1.3
LINC00840-201ENST00000431737 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
LINC00840-201ENST00000431737 HRES1P13985 223 aa6.94□□□□□ -1.3
LINC00840-201ENST00000431737 Q8N1X5 172 aa6.93□□□□□ -1.3
LINC00840-201ENST00000431737 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
LINC00840-201ENST00000431737 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
LINC00840-201ENST00000431737 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
LINC00840-201ENST00000431737 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
LINC00840-201ENST00000431737 EPPK1P58107 5090 aaKnown RBP6.88□□□□□ -1.31
LINC00840-201ENST00000431737 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
LINC00840-201ENST00000431737 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
LINC00840-201ENST00000431737 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
LINC00840-201ENST00000431737 ACYP2P14621 99 aa6.86□□□□□ -1.31
LINC00840-201ENST00000431737 Q75L30 129 aa6.84□□□□□ -1.31
LINC00840-201ENST00000431737 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
LINC00840-201ENST00000431737 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
LINC00840-201ENST00000431737 MYCBP2O75592 4640 aa6.79□□□□□ -1.32
LINC00840-201ENST00000431737 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
LINC00840-201ENST00000431737 A8MUN3 132 aa6.77□□□□□ -1.33
LINC00840-201ENST00000431737 PSPHP1O15172 72 aa6.77□□□□□ -1.33
LINC00840-201ENST00000431737 Q5VV11 94 aa6.77□□□□□ -1.33
LINC00840-201ENST00000431737 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
LINC00840-201ENST00000431737 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
LINC00840-201ENST00000431737 SPINK7P58062 85 aa6.71□□□□□ -1.33
LINC00840-201ENST00000431737 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.33
LINC00840-201ENST00000431737 PRO0628Q9UI54 55 aa6.71□□□□□ -1.33
LINC00840-201ENST00000431737 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
LINC00840-201ENST00000431737 XP32Q5T750 250 aa6.7□□□□□ -1.34
LINC00840-201ENST00000431737 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
LINC00840-201ENST00000431737 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
LINC00840-201ENST00000431737 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
LINC00840-201ENST00000431737 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
LINC00840-201ENST00000431737 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
LINC00840-201ENST00000431737 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
LINC00840-201ENST00000431737 ABCA13Q86UQ4 5058 aa6.61□□□□□ -1.35
LINC00840-201ENST00000431737 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms