RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 ITPR1Q14643 2758 aa2.61□□□□□ -1.99
UBR3-204ENST00000430321 CHD7Q9P2D1 2997 aa2.61□□□□□ -1.99
UBR3-204ENST00000430321 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
UBR3-204ENST00000430321 NIPBLQ6KC79 2804 aaeCLIP2.6□□□□□ -1.99
UBR3-204ENST00000430321 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
UBR3-204ENST00000430321 LORP23490 312 aaPredicted RBP2.59□□□□□ -1.99
UBR3-204ENST00000430321 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
UBR3-204ENST00000430321 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
UBR3-204ENST00000430321 UTP20O75691 2785 aaKnown RBP2.58□□□□□ -2
UBR3-204ENST00000430321 MYCBP2O75592 4640 aa2.57□□□□□ -2
UBR3-204ENST00000430321 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
UBR3-204ENST00000430321 KRTAP12-3P60328 96 aa2.56□□□□□ -2
UBR3-204ENST00000430321 TENM2Q9NT68 2774 aa2.53□□□□□ -2
UBR3-204ENST00000430321 PRRC2CQ9Y520 2896 aaKnown RBP2.52□□□□□ -2.01
UBR3-204ENST00000430321 DSPP15924 2871 aaKnown RBP2.52□□□□□ -2.01
UBR3-204ENST00000430321 NBEAL2Q6ZNJ1 2754 aa2.51□□□□□ -2.01
UBR3-204ENST00000430321 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
UBR3-204ENST00000430321 MGAQ8IWI9 3026 aa2.5□□□□□ -2.01
UBR3-204ENST00000430321 FLNCQ14315 2725 aa2.49□□□□□ -2.01
UBR3-204ENST00000430321 MT1HP80294 61 aa2.48□□□□□ -2.01
UBR3-204ENST00000430321 DNAH1Q9P2D7 4330 aa2.48□□□□□ -2.01
UBR3-204ENST00000430321 HERC1Q15751 4861 aa2.47□□□□□ -2.01
UBR3-204ENST00000430321 PDZD2O15018 2839 aa2.46□□□□□ -2.01
UBR3-204ENST00000430321 ASH1LQ9NR48 2969 aaKnown RBP2.46□□□□□ -2.02
UBR3-204ENST00000430321 LRBAP50851 2863 aa2.45□□□□□ -2.02
UBR3-204ENST00000430321 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
UBR3-204ENST00000430321 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
UBR3-204ENST00000430321 DNAH10Q8IVF4 4471 aa2.44□□□□□ -2.02
UBR3-204ENST00000430321 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
UBR3-204ENST00000430321 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
UBR3-204ENST00000430321 TENM1Q9UKZ4 2725 aa2.42□□□□□ -2.02
UBR3-204ENST00000430321 TNRC18O15417 2968 aaPredicted RBP2.41□□□□□ -2.02
UBR3-204ENST00000430321 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
UBR3-204ENST00000430321 MT2AP02795 61 aa2.41□□□□□ -2.02
UBR3-204ENST00000430321 C5orf42Q9H799 3197 aa2.4□□□□□ -2.02
UBR3-204ENST00000430321 HTTP42858 3142 aa2.4□□□□□ -2.03
UBR3-204ENST00000430321 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.03
UBR3-204ENST00000430321 EYSQ5T1H1 3165 aa2.38□□□□□ -2.03
UBR3-204ENST00000430321 MXRA5Q9NR99 2828 aa2.38□□□□□ -2.03
UBR3-204ENST00000430321 DYNC1H1Q14204 4646 aaKnown RBP2.38□□□□□ -2.03
UBR3-204ENST00000430321 DNAH11Q96DT5 4516 aa2.37□□□□□ -2.03
UBR3-204ENST00000430321 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
UBR3-204ENST00000430321 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
UBR3-204ENST00000430321 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
UBR3-204ENST00000430321 HSPG2P98160 4391 aa2.35□□□□□ -2.03
UBR3-204ENST00000430321 FRYQ5TBA9 3013 aa2.33□□□□□ -2.04
UBR3-204ENST00000430321 SPRR2EP22531 72 aa2.33□□□□□ -2.04
UBR3-204ENST00000430321 SPRR2BP35325 72 aa2.33□□□□□ -2.04
UBR3-204ENST00000430321 SPRR2AP35326 72 aa2.33□□□□□ -2.04
UBR3-204ENST00000430321 HRNRQ86YZ3 2850 aaPredicted RBP2.32□□□□□ -2.04
UBR3-204ENST00000430321 TGP01266 2768 aa2.32□□□□□ -2.04
UBR3-204ENST00000430321 DNAH12Q6ZR08 3092 aa2.32□□□□□ -2.04
UBR3-204ENST00000430321 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
UBR3-204ENST00000430321 NF1P21359 2839 aa2.31□□□□□ -2.04
UBR3-204ENST00000430321 SPRR2DP22532 72 aa2.29□□□□□ -2.04
UBR3-204ENST00000430321 OTOGQ6ZRI0 2925 aa2.29□□□□□ -2.04
UBR3-204ENST00000430321 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
UBR3-204ENST00000430321 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
UBR3-204ENST00000430321 MT1FP04733 61 aa2.29□□□□□ -2.04
UBR3-204ENST00000430321 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
UBR3-204ENST00000430321 CEP350Q5VT06 3117 aa2.28□□□□□ -2.04
UBR3-204ENST00000430321 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
UBR3-204ENST00000430321 DNAH6Q9C0G6 4158 aa2.27□□□□□ -2.05
UBR3-204ENST00000430321 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
UBR3-204ENST00000430321 FBN2P35556 2912 aa2.26□□□□□ -2.05
UBR3-204ENST00000430321 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
UBR3-204ENST00000430321 UNC80Q8N2C7 3258 aa2.24□□□□□ -2.05
UBR3-204ENST00000430321 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
UBR3-204ENST00000430321 DCHS2Q6V1P9 2916 aa2.24□□□□□ -2.05
UBR3-204ENST00000430321 NBEAQ8NFP9 2946 aa2.24□□□□□ -2.05
UBR3-204ENST00000430321 SRCAPQ6ZRS2 3230 aa2.23□□□□□ -2.05
UBR3-204ENST00000430321 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
UBR3-204ENST00000430321 ATMQ13315 3056 aa2.23□□□□□ -2.05
UBR3-204ENST00000430321 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
UBR3-204ENST00000430321 WDFY4Q6ZS81 3184 aa2.22□□□□□ -2.05
UBR3-204ENST00000430321 PRUNE2Q8WUY3 3088 aa2.22□□□□□ -2.05
UBR3-204ENST00000430321 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
UBR3-204ENST00000430321 PKD1L1Q8TDX9 2849 aa2.21□□□□□ -2.06
UBR3-204ENST00000430321 DNAH9Q9NYC9 4486 aa2.2□□□□□ -2.06
UBR3-204ENST00000430321 MT1GP13640 62 aa2.2□□□□□ -2.06
UBR3-204ENST00000430321 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
UBR3-204ENST00000430321 TACC2O95359 2948 aa2.19□□□□□ -2.06
UBR3-204ENST00000430321 KALRNO60229 2985 aa2.19□□□□□ -2.06
UBR3-204ENST00000430321 CELSR2Q9HCU4 2923 aa2.19□□□□□ -2.06
UBR3-204ENST00000430321 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
UBR3-204ENST00000430321 A0A0C4DFX4 3053 aa2.18□□□□□ -2.06
UBR3-204ENST00000430321 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
UBR3-204ENST00000430321 CELSR1Q9NYQ6 3014 aa2.17□□□□□ -2.06
UBR3-204ENST00000430321 BIRC6Q9NR09 4857 aa2.17□□□□□ -2.06
UBR3-204ENST00000430321 FRYLO94915 3013 aa2.17□□□□□ -2.06
UBR3-204ENST00000430321 ZZEF1O43149 2961 aa2.17□□□□□ -2.06
UBR3-204ENST00000430321 SACSQ9NZJ4 4579 aa2.16□□□□□ -2.06
UBR3-204ENST00000430321 VWFP04275 2813 aa2.16□□□□□ -2.06
UBR3-204ENST00000430321 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
UBR3-204ENST00000430321 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.06
UBR3-204ENST00000430321 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.07
UBR3-204ENST00000430321 ZANQ9Y493 2812 aa2.15□□□□□ -2.07
UBR3-204ENST00000430321 DMXL2Q8TDJ6 3036 aa2.15□□□□□ -2.07
UBR3-204ENST00000430321 FBN1P35555 2871 aaKnown RBP2.14□□□□□ -2.07
UBR3-204ENST00000430321 DNAH5Q8TE73 4624 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms