RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
NEDD1-203ENST00000429527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.8□□□□□ -1.48
NEDD1-203ENST00000429527 A0A096LNI7 61 aa5.78□□□□□ -1.48
NEDD1-203ENST00000429527 A0A1W2PNN7 141 aa5.77□□□□□ -1.49
NEDD1-203ENST00000429527 PANO1I0J062 215 aa5.77□□□□□ -1.49
NEDD1-203ENST00000429527 UBE2BP63146 152 aa5.77□□□□□ -1.49
NEDD1-203ENST00000429527 Q96NJ1 140 aa5.77□□□□□ -1.49
NEDD1-203ENST00000429527 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
NEDD1-203ENST00000429527 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
NEDD1-203ENST00000429527 MP68P56378 58 aa5.75□□□□□ -1.49
NEDD1-203ENST00000429527 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
NEDD1-203ENST00000429527 TP53AIP1Q9HCN2 124 aa5.74□□□□□ -1.49
NEDD1-203ENST00000429527 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
NEDD1-203ENST00000429527 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
NEDD1-203ENST00000429527 MOBPQ13875 183 aa5.73□□□□□ -1.49
NEDD1-203ENST00000429527 TNXBP22105 4242 aa5.72□□□□□ -1.49
NEDD1-203ENST00000429527 A0A087WSZ3 146 aa5.72□□□□□ -1.49
NEDD1-203ENST00000429527 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
NEDD1-203ENST00000429527 LIMD2Q9BT23 127 aa5.72□□□□□ -1.49
NEDD1-203ENST00000429527 CHTF8P0CG12 524 aa5.71□□□□□ -1.5
NEDD1-203ENST00000429527 Q5VV11 94 aa5.71□□□□□ -1.5
NEDD1-203ENST00000429527 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
NEDD1-203ENST00000429527 UBE2AP49459 152 aa5.7□□□□□ -1.5
NEDD1-203ENST00000429527 H0Y9P7 68 aa5.7□□□□□ -1.5
NEDD1-203ENST00000429527 Q75L30 129 aa5.7□□□□□ -1.5
NEDD1-203ENST00000429527 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
NEDD1-203ENST00000429527 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
NEDD1-203ENST00000429527 PRLHP81277 87 aa5.69□□□□□ -1.5
NEDD1-203ENST00000429527 SPINK6Q6UWN8 80 aa5.69□□□□□ -1.5
NEDD1-203ENST00000429527 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
NEDD1-203ENST00000429527 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
NEDD1-203ENST00000429527 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
NEDD1-203ENST00000429527 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
NEDD1-203ENST00000429527 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
NEDD1-203ENST00000429527 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
NEDD1-203ENST00000429527 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
NEDD1-203ENST00000429527 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
NEDD1-203ENST00000429527 ZNF706Q9Y5V0 76 aaPredicted RBP5.63□□□□□ -1.51
NEDD1-203ENST00000429527 C8orf17Q9NRJ1 99 aa5.63□□□□□ -1.51
NEDD1-203ENST00000429527 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
NEDD1-203ENST00000429527 CD164Q04900 197 aa5.62□□□□□ -1.51
NEDD1-203ENST00000429527 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
NEDD1-203ENST00000429527 COA5Q86WW8 74 aa5.6□□□□□ -1.51
NEDD1-203ENST00000429527 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
NEDD1-203ENST00000429527 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
NEDD1-203ENST00000429527 J3QL48 77 aa5.59□□□□□ -1.51
NEDD1-203ENST00000429527 IGKV2-24A0A0C4DH68 120 aa5.59□□□□□ -1.51
NEDD1-203ENST00000429527 A8MUN3 132 aa5.59□□□□□ -1.51
NEDD1-203ENST00000429527 DEFB116Q30KQ4 102 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 HERC1Q15751 4861 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 A0A087X002 238 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
NEDD1-203ENST00000429527 MRPL34Q9BQ48 92 aaKnown RBP5.56□□□□□ -1.52
NEDD1-203ENST00000429527 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
NEDD1-203ENST00000429527 A6NN06 94 aa5.55□□□□□ -1.52
NEDD1-203ENST00000429527 PSPHP1O15172 72 aa5.55□□□□□ -1.52
NEDD1-203ENST00000429527 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
NEDD1-203ENST00000429527 LCA10Q71F78 164 aa5.54□□□□□ -1.52
NEDD1-203ENST00000429527 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
NEDD1-203ENST00000429527 ZNF861PO60384 105 aa5.52□□□□□ -1.53
NEDD1-203ENST00000429527 HRES1P13985 223 aa5.52□□□□□ -1.53
NEDD1-203ENST00000429527 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
NEDD1-203ENST00000429527 PRR4Q16378 134 aa5.5□□□□□ -1.53
NEDD1-203ENST00000429527 SEC61GP60059 68 aa5.49□□□□□ -1.53
NEDD1-203ENST00000429527 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
NEDD1-203ENST00000429527 NDUFS5O43920 106 aa5.49□□□□□ -1.53
NEDD1-203ENST00000429527 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
NEDD1-203ENST00000429527 SSBP3-AS1Q7Z2R9 100 aa5.48□□□□□ -1.53
NEDD1-203ENST00000429527 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
NEDD1-203ENST00000429527 DMBT1Q9UGM3 2413 aaPredicted RBP5.45□□□□□ -1.54
NEDD1-203ENST00000429527 A8MU10 97 aa5.45□□□□□ -1.54
NEDD1-203ENST00000429527 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
NEDD1-203ENST00000429527 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
NEDD1-203ENST00000429527 Q5W150 140 aa5.44□□□□□ -1.54
NEDD1-203ENST00000429527 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
NEDD1-203ENST00000429527 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
NEDD1-203ENST00000429527 IGLV9-49A0A0B4J1Y8 123 aa5.42□□□□□ -1.54
NEDD1-203ENST00000429527 FLG2Q5D862 2391 aaPredicted RBP5.41□□□□□ -1.54
NEDD1-203ENST00000429527 ACYP2P14621 99 aa5.41□□□□□ -1.54
NEDD1-203ENST00000429527 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
NEDD1-203ENST00000429527 PCOTHQ58A44 107 aa5.39□□□□□ -1.55
NEDD1-203ENST00000429527 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
NEDD1-203ENST00000429527 A6NED7 52 aa5.38□□□□□ -1.55
NEDD1-203ENST00000429527 SPINK7P58062 85 aa5.37□□□□□ -1.55
NEDD1-203ENST00000429527 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
NEDD1-203ENST00000429527 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
NEDD1-203ENST00000429527 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
NEDD1-203ENST00000429527 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
NEDD1-203ENST00000429527 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
NEDD1-203ENST00000429527 LINC00313P59037 77 aa5.31□□□□□ -1.56
NEDD1-203ENST00000429527 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
NEDD1-203ENST00000429527 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
NEDD1-203ENST00000429527 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
NEDD1-203ENST00000429527 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
NEDD1-203ENST00000429527 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
NEDD1-203ENST00000429527 SPINK1P00995 79 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms