RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
TVP23C-203ENST00000428082 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
TVP23C-203ENST00000428082 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
TVP23C-203ENST00000428082 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
TVP23C-203ENST00000428082 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
TVP23C-203ENST00000428082 Q96NJ1 140 aa9.36□□□□□ -0.91
TVP23C-203ENST00000428082 HSPG2P98160 4391 aa9.35□□□□□ -0.91
TVP23C-203ENST00000428082 RYR1P21817 5038 aa9.33□□□□□ -0.92
TVP23C-203ENST00000428082 FAT1Q14517 4588 aa9.33□□□□□ -0.92
TVP23C-203ENST00000428082 IGLV7-43P04211 117 aa9.33□□□□□ -0.92
TVP23C-203ENST00000428082 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
TVP23C-203ENST00000428082 KIAA1109Q2LD37 5005 aa9.33□□□□□ -0.92
TVP23C-203ENST00000428082 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
TVP23C-203ENST00000428082 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
TVP23C-203ENST00000428082 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
TVP23C-203ENST00000428082 MPLKIPQ8TAP9 179 aa9.31□□□□□ -0.92
TVP23C-203ENST00000428082 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
TVP23C-203ENST00000428082 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
TVP23C-203ENST00000428082 Q1T7F1 81 aa9.28□□□□□ -0.92
TVP23C-203ENST00000428082 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
TVP23C-203ENST00000428082 CD164Q04900 197 aa9.27□□□□□ -0.93
TVP23C-203ENST00000428082 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
TVP23C-203ENST00000428082 PRR4Q16378 134 aa9.25□□□□□ -0.93
TVP23C-203ENST00000428082 V9GYY9 64 aa9.25□□□□□ -0.93
TVP23C-203ENST00000428082 IGHV6-1A0A0B4J1U7 121 aa9.25□□□□□ -0.93
TVP23C-203ENST00000428082 Q5VSD8 79 aa9.24□□□□□ -0.93
TVP23C-203ENST00000428082 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
TVP23C-203ENST00000428082 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
TVP23C-203ENST00000428082 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
TVP23C-203ENST00000428082 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
TVP23C-203ENST00000428082 ANAPC11Q9NYG5 84 aa9.22□□□□□ -0.93
TVP23C-203ENST00000428082 Q8N1X5 172 aa9.21□□□□□ -0.94
TVP23C-203ENST00000428082 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
TVP23C-203ENST00000428082 NDUFS5O43920 106 aa9.2□□□□□ -0.94
TVP23C-203ENST00000428082 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
TVP23C-203ENST00000428082 C1orf195Q5TG92 126 aa9.16□□□□□ -0.94
TVP23C-203ENST00000428082 C8orf87E5RJ46 101 aa9.15□□□□□ -0.94
TVP23C-203ENST00000428082 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
TVP23C-203ENST00000428082 PKHD1L1Q86WI1 4243 aa9.12□□□□□ -0.95
TVP23C-203ENST00000428082 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
TVP23C-203ENST00000428082 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
TVP23C-203ENST00000428082 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
TVP23C-203ENST00000428082 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
TVP23C-203ENST00000428082 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
TVP23C-203ENST00000428082 COA5Q86WW8 74 aa9.08□□□□□ -0.96
TVP23C-203ENST00000428082 A0A087X002 238 aa9.07□□□□□ -0.96
TVP23C-203ENST00000428082 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
TVP23C-203ENST00000428082 HERC2O95714 4834 aa9.06□□□□□ -0.96
TVP23C-203ENST00000428082 PSPHP1O15172 72 aa9.05□□□□□ -0.96
TVP23C-203ENST00000428082 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
TVP23C-203ENST00000428082 KRTAP13-2Q52LG2 175 aa9.03□□□□□ -0.96
TVP23C-203ENST00000428082 LINC00313P59037 77 aa9.01□□□□□ -0.97
TVP23C-203ENST00000428082 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
TVP23C-203ENST00000428082 PRR26Q8N8Z3 221 aa9.01□□□□□ -0.97
TVP23C-203ENST00000428082 A8MUN3 132 aa9□□□□□ -0.97
TVP23C-203ENST00000428082 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
TVP23C-203ENST00000428082 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
TVP23C-203ENST00000428082 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
TVP23C-203ENST00000428082 Q5VV11 94 aa8.97□□□□□ -0.97
TVP23C-203ENST00000428082 Q5W150 140 aa8.96□□□□□ -0.97
TVP23C-203ENST00000428082 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
TVP23C-203ENST00000428082 PRR15LQ9BU68 103 aa8.95□□□□□ -0.98
TVP23C-203ENST00000428082 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
TVP23C-203ENST00000428082 ABCA13Q86UQ4 5058 aa8.95□□□□□ -0.98
TVP23C-203ENST00000428082 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
TVP23C-203ENST00000428082 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
TVP23C-203ENST00000428082 HRES1P13985 223 aa8.93□□□□□ -0.98
TVP23C-203ENST00000428082 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
TVP23C-203ENST00000428082 Q75L30 129 aa8.92□□□□□ -0.98
TVP23C-203ENST00000428082 LINC01558Q9Y6Z2 57 aa8.92□□□□□ -0.98
TVP23C-203ENST00000428082 ACYP2P14621 99 aa8.9□□□□□ -0.98
TVP23C-203ENST00000428082 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
TVP23C-203ENST00000428082 TNXBP22105 4242 aa8.88□□□□□ -0.99
TVP23C-203ENST00000428082 SPINK1P00995 79 aa8.88□□□□□ -0.99
TVP23C-203ENST00000428082 MT1HL1P0DM35 61 aa8.86□□□□□ -0.99
TVP23C-203ENST00000428082 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
TVP23C-203ENST00000428082 SPAG11AQ6PDA7 123 aa8.85□□□□□ -0.99
TVP23C-203ENST00000428082 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
TVP23C-203ENST00000428082 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
TVP23C-203ENST00000428082 DMAC1Q96GE9 116 aa8.84□□□□□ -1
TVP23C-203ENST00000428082 RPS29P62273 56 aaKnown RBP8.82□□□□□ -1
TVP23C-203ENST00000428082 A6NED7 52 aa8.81□□□□□ -1
TVP23C-203ENST00000428082 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
TVP23C-203ENST00000428082 DMBT1Q9UGM3 2413 aaPredicted RBP8.76□□□□□ -1.01
TVP23C-203ENST00000428082 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
TVP23C-203ENST00000428082 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
TVP23C-203ENST00000428082 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
TVP23C-203ENST00000428082 J3QL48 77 aa8.72□□□□□ -1.01
TVP23C-203ENST00000428082 LCA10Q71F78 164 aa8.7□□□□□ -1.02
TVP23C-203ENST00000428082 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
TVP23C-203ENST00000428082 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
TVP23C-203ENST00000428082 A8MU10 97 aa8.64□□□□□ -1.03
TVP23C-203ENST00000428082 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
TVP23C-203ENST00000428082 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
TVP23C-203ENST00000428082 SPINK7P58062 85 aa8.61□□□□□ -1.03
TVP23C-203ENST00000428082 A0A1B0GU69 56 aa8.6□□□□□ -1.03
TVP23C-203ENST00000428082 A8MUU9 505 aa8.53□□□□□ -1.04
TVP23C-203ENST00000428082 C20orf166-AS1Q96NR2 134 aa8.53□□□□□ -1.04
TVP23C-203ENST00000428082 A6NN06 94 aa8.51□□□□□ -1.05
TVP23C-203ENST00000428082 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms