RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 C1orf195Q5TG92 126 aa15.27■□□□□ 0.03
SH3GL3-202ENST00000427482 KLKP1Q107X0 134 aa15.25■□□□□ 0.03
SH3GL3-202ENST00000427482 LINC00304Q8N9R0 145 aa15.24■□□□□ 0.03
SH3GL3-202ENST00000427482 HSPG2P98160 4391 aa15.23■□□□□ 0.03
SH3GL3-202ENST00000427482 TMEM254Q8TBM7 123 aa15.23■□□□□ 0.03
SH3GL3-202ENST00000427482 SNURFQ9Y675 71 aa15.21■□□□□ 0.03
SH3GL3-202ENST00000427482 Q5VSD8 79 aa15.2■□□□□ 0.02
SH3GL3-202ENST00000427482 SPAG11AQ6PDA7 123 aa15.2■□□□□ 0.02
SH3GL3-202ENST00000427482 NOTCH2NLQ7Z3S9 236 aa15.2■□□□□ 0.02
SH3GL3-202ENST00000427482 RPS29P62273 56 aaKnown RBP15.19■□□□□ 0.02
SH3GL3-202ENST00000427482 A0A0U1RQV1 116 aa15.16■□□□□ 0.02
SH3GL3-202ENST00000427482 RYR1P21817 5038 aa15.15■□□□□ 0.02
SH3GL3-202ENST00000427482 C5orf47Q569G3 176 aa15.15■□□□□ 0.02
SH3GL3-202ENST00000427482 C8orf87E5RJ46 101 aa15.13■□□□□ 0.01
SH3GL3-202ENST00000427482 MRPL34Q9BQ48 92 aaKnown RBP15.12■□□□□ 0.01
SH3GL3-202ENST00000427482 H7BZZ5 65 aa15.09■□□□□ 0.01
SH3GL3-202ENST00000427482 TMEM258P61165 79 aa15.08■□□□□ 0.01
SH3GL3-202ENST00000427482 NDUFC1O43677 76 aa15.06■□□□□ 0
SH3GL3-202ENST00000427482 TP53AIP1Q9HCN2 124 aa15.05■□□□□ -0
SH3GL3-202ENST00000427482 KRTAP17-1Q9BYP8 105 aa15.04■□□□□ -0
SH3GL3-202ENST00000427482 LINC00313P59037 77 aa15.03■□□□□ -0
SH3GL3-202ENST00000427482 ZCCHC13Q8WW36 166 aaKnown RBP15.03■□□□□ -0
SH3GL3-202ENST00000427482 MP68P56378 58 aa15.02■□□□□ -0
SH3GL3-202ENST00000427482 H0Y9P7 68 aa15.01□□□□□ -0.01
SH3GL3-202ENST00000427482 NDUFS5O43920 106 aa15.01□□□□□ -0.01
SH3GL3-202ENST00000427482 TRAV22A0A0B4J277 110 aa14.97□□□□□ -0.01
SH3GL3-202ENST00000427482 EPPK1P58107 5090 aaKnown RBP14.95□□□□□ -0.02
SH3GL3-202ENST00000427482 H3BPC8 53 aa14.95□□□□□ -0.02
SH3GL3-202ENST00000427482 KIAA1109Q2LD37 5005 aa14.95□□□□□ -0.02
SH3GL3-202ENST00000427482 Q8N1X5 172 aa14.94□□□□□ -0.02
SH3GL3-202ENST00000427482 LINC00208Q96KT6 92 aa14.93□□□□□ -0.02
SH3GL3-202ENST00000427482 KRTAP10-8P60410 259 aa14.92□□□□□ -0.02
SH3GL3-202ENST00000427482 KRTAP16-1A8MUX0 517 aa14.91□□□□□ -0.02
SH3GL3-202ENST00000427482 FAM236DA0A1B0GTK5 79 aa14.89□□□□□ -0.03
SH3GL3-202ENST00000427482 FAM236CP0DP71 79 aa14.89□□□□□ -0.03
SH3GL3-202ENST00000427482 Q8N9P0 234 aaPredicted RBP14.87□□□□□ -0.03
SH3GL3-202ENST00000427482 TNXBP22105 4242 aa14.86□□□□□ -0.03
SH3GL3-202ENST00000427482 C1orf64Q8NEQ6 169 aa14.85□□□□□ -0.03
SH3GL3-202ENST00000427482 LRP1Q07954 4544 aaKnown RBP14.84□□□□□ -0.03
SH3GL3-202ENST00000427482 FLG2Q5D862 2391 aaPredicted RBP14.83□□□□□ -0.04
SH3GL3-202ENST00000427482 KRTAP13-3Q3SY46 172 aa14.79□□□□□ -0.04
SH3GL3-202ENST00000427482 FAT3Q8TDW7 4589 aa14.79□□□□□ -0.04
SH3GL3-202ENST00000427482 ATP5EP56381 51 aaPredicted RBP14.78□□□□□ -0.04
SH3GL3-202ENST00000427482 Q5W150 140 aa14.78□□□□□ -0.04
SH3GL3-202ENST00000427482 RETNLBQ9BQ08 111 aa14.76□□□□□ -0.05
SH3GL3-202ENST00000427482 RPS28P62857 69 aaKnown RBP14.69□□□□□ -0.06
SH3GL3-202ENST00000427482 MT1HL1P0DM35 61 aa14.66□□□□□ -0.06
SH3GL3-202ENST00000427482 LOC101927531A0A1B0GV80 90 aa14.65□□□□□ -0.06
SH3GL3-202ENST00000427482 C9orf92A6NGG3 77 aa14.62□□□□□ -0.07
SH3GL3-202ENST00000427482 SERP1Q9Y6X1 66 aa14.62□□□□□ -0.07
SH3GL3-202ENST00000427482 SPANXA2-OT1Q8N9U9 137 aa14.6□□□□□ -0.07
SH3GL3-202ENST00000427482 PCOTHQ58A44 107 aa14.59□□□□□ -0.07
SH3GL3-202ENST00000427482 OXTP01178 125 aa14.57□□□□□ -0.08
SH3GL3-202ENST00000427482 KRTAP4-5Q9BYR2 181 aa14.55□□□□□ -0.08
SH3GL3-202ENST00000427482 CYP4F30PQ9H0H9 118 aa14.55□□□□□ -0.08
SH3GL3-202ENST00000427482 MYCBP2O75592 4640 aa14.55□□□□□ -0.08
SH3GL3-202ENST00000427482 PRR4Q16378 134 aa14.54□□□□□ -0.08
SH3GL3-202ENST00000427482 FP248Q71RG6 208 aaPredicted RBP14.54□□□□□ -0.08
SH3GL3-202ENST00000427482 C20orf166-AS1Q96NR2 134 aa14.54□□□□□ -0.08
SH3GL3-202ENST00000427482 A8MUU9 505 aa14.52□□□□□ -0.08
SH3GL3-202ENST00000427482 DMBT1Q9UGM3 2413 aaPredicted RBP14.52□□□□□ -0.08
SH3GL3-202ENST00000427482 IGKV2-30P06310 120 aa14.5□□□□□ -0.09
SH3GL3-202ENST00000427482 IGLV7-46A0A075B6I9 117 aa14.48□□□□□ -0.09
SH3GL3-202ENST00000427482 IGKV2D-30A0A075B6S6 120 aa14.36□□□□□ -0.11
SH3GL3-202ENST00000427482 Q75L30 129 aa14.36□□□□□ -0.11
SH3GL3-202ENST00000427482 BIRC6Q9NR09 4857 aa14.33□□□□□ -0.12
SH3GL3-202ENST00000427482 HRES1P13985 223 aa14.32□□□□□ -0.12
SH3GL3-202ENST00000427482 C7orf65Q6ZTY9 151 aa14.28□□□□□ -0.12
SH3GL3-202ENST00000427482 SMIM26A0A096LP01 95 aa14.26□□□□□ -0.13
SH3GL3-202ENST00000427482 HERC2O95714 4834 aa14.22□□□□□ -0.13
SH3GL3-202ENST00000427482 XP32Q5T750 250 aa14.22□□□□□ -0.13
SH3GL3-202ENST00000427482 ABCA13Q86UQ4 5058 aa14.2□□□□□ -0.14
SH3GL3-202ENST00000427482 RPL37P61927 97 aaKnown RBP14.18□□□□□ -0.14
SH3GL3-202ENST00000427482 COA5Q86WW8 74 aa14.18□□□□□ -0.14
SH3GL3-202ENST00000427482 DMAC1Q96GE9 116 aa14.15□□□□□ -0.14
SH3GL3-202ENST00000427482 ATP11AUNQ6ZP68 121 aa14.12□□□□□ -0.15
SH3GL3-202ENST00000427482 TPRXLQ17RH7 258 aa14.1□□□□□ -0.15
SH3GL3-202ENST00000427482 ACYP2P14621 99 aa14.08□□□□□ -0.15
SH3GL3-202ENST00000427482 SPINK7P58062 85 aa14.08□□□□□ -0.15
SH3GL3-202ENST00000427482 J3QL48 77 aa14.07□□□□□ -0.16
SH3GL3-202ENST00000427482 MPLKIPQ8TAP9 179 aa13.99□□□□□ -0.17
SH3GL3-202ENST00000427482 C4orf26Q17RF5 130 aa13.98□□□□□ -0.17
SH3GL3-202ENST00000427482 Q1T7F1 81 aa13.93□□□□□ -0.18
SH3GL3-202ENST00000427482 A8MUN3 132 aa13.91□□□□□ -0.18
SH3GL3-202ENST00000427482 CHKB-CPT1BH3BT56 60 aa13.87□□□□□ -0.19
SH3GL3-202ENST00000427482 V9GYY9 64 aa13.84□□□□□ -0.19
SH3GL3-202ENST00000427482 KRTAP3-1Q9BYR8 98 aa13.81□□□□□ -0.2
SH3GL3-202ENST00000427482 LPAP08519 4548 aa13.79□□□□□ -0.2
SH3GL3-202ENST00000427482 COX6B2Q6YFQ2 88 aa13.77□□□□□ -0.21
SH3GL3-202ENST00000427482 LRP2P98164 4655 aa13.77□□□□□ -0.21
SH3GL3-202ENST00000427482 LINC01558Q9Y6Z2 57 aa13.69□□□□□ -0.22
SH3GL3-202ENST00000427482 PSPHP1O15172 72 aa13.68□□□□□ -0.22
SH3GL3-202ENST00000427482 PRR15LQ9BU68 103 aa13.62□□□□□ -0.23
SH3GL3-202ENST00000427482 PCLOQ9Y6V0 5065 aa13.6□□□□□ -0.23
SH3GL3-202ENST00000427482 SEC61BP60468 96 aaKnown RBP13.58□□□□□ -0.24
SH3GL3-202ENST00000427482 Q5VV11 94 aa13.57□□□□□ -0.24
SH3GL3-202ENST00000427482 SPTSSBQ8NFR3 76 aa13.51□□□□□ -0.25
SH3GL3-202ENST00000427482 RBM12B-AS1Q9P1G2 102 aa13.39□□□□□ -0.27
SH3GL3-202ENST00000427482 A0A1B0GU69 56 aa13.39□□□□□ -0.27
SH3GL3-202ENST00000427482 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms