RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
LINC00458-202ENST00000427299 hDV103S1A0JD37 113 aa3.03□□□□□ -1.92
LINC00458-202ENST00000427299 UBE2DNLQ8IWF7 75 aa3.03□□□□□ -1.92
LINC00458-202ENST00000427299 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
LINC00458-202ENST00000427299 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
LINC00458-202ENST00000427299 OTOGQ6ZRI0 2925 aa3.03□□□□□ -1.92
LINC00458-202ENST00000427299 DYNC2H1Q8NCM8 4307 aaKnown RBP3.03□□□□□ -1.92
LINC00458-202ENST00000427299 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.02□□□□□ -1.93
LINC00458-202ENST00000427299 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 ZNF861PO60384 105 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 SPRR1BP22528 89 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
LINC00458-202ENST00000427299 MOBPQ13875 183 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
LINC00458-202ENST00000427299 A0A087WSZ3 146 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 A0A096LNI7 61 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 A8MWP4 228 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 NDUFS5O43920 106 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 Q1T7F1 81 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 C1orf195Q5TG92 126 aa3.01□□□□□ -1.93
LINC00458-202ENST00000427299 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
LINC00458-202ENST00000427299 TENM1Q9UKZ4 2725 aa3□□□□□ -1.93
LINC00458-202ENST00000427299 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
LINC00458-202ENST00000427299 H0Y9P7 68 aa3□□□□□ -1.93
LINC00458-202ENST00000427299 PRLHP81277 87 aa3□□□□□ -1.93
LINC00458-202ENST00000427299 CASC2Q6XLA1 102 aa3□□□□□ -1.93
LINC00458-202ENST00000427299 IGHV6-1A0A0B4J1U7 121 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 FAM229BQ4G0N7 80 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 PRR15Q8IV56 129 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 C1orf64Q8NEQ6 169 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
LINC00458-202ENST00000427299 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
LINC00458-202ENST00000427299 NUPR2A6NF83 97 aa2.98□□□□□ -1.93
LINC00458-202ENST00000427299 LIMD2Q9BT23 127 aa2.98□□□□□ -1.93
LINC00458-202ENST00000427299 HECTD1Q9ULT8 2610 aa2.98□□□□□ -1.93
LINC00458-202ENST00000427299 DNAH9Q9NYC9 4486 aa2.98□□□□□ -1.93
LINC00458-202ENST00000427299 TENM3Q9P273 2699 aa2.97□□□□□ -1.93
LINC00458-202ENST00000427299 F8P00451 2351 aa2.97□□□□□ -1.93
LINC00458-202ENST00000427299 LINC00208Q96KT6 92 aa2.97□□□□□ -1.93
LINC00458-202ENST00000427299 K7EIL1 84 aa2.96□□□□□ -1.94
LINC00458-202ENST00000427299 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
LINC00458-202ENST00000427299 DNHD1Q96M86 4753 aa2.96□□□□□ -1.94
LINC00458-202ENST00000427299 DNAH6Q9C0G6 4158 aa2.95□□□□□ -1.94
LINC00458-202ENST00000427299 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
LINC00458-202ENST00000427299 A0A1W2PNN7 141 aa2.95□□□□□ -1.94
LINC00458-202ENST00000427299 PHF5AQ7RTV0 110 aaKnown RBP2.95□□□□□ -1.94
LINC00458-202ENST00000427299 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
LINC00458-202ENST00000427299 PKD1L1Q8TDX9 2849 aa2.95□□□□□ -1.94
LINC00458-202ENST00000427299 NBDYA0A0U1RRE5 68 aa2.94□□□□□ -1.94
LINC00458-202ENST00000427299 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
LINC00458-202ENST00000427299 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
LINC00458-202ENST00000427299 SPACA4Q8TDM5 124 aa2.94□□□□□ -1.94
LINC00458-202ENST00000427299 C8orf17Q9NRJ1 99 aa2.94□□□□□ -1.94
LINC00458-202ENST00000427299 RBM12B-AS1Q9P1G2 102 aa2.93□□□□□ -1.94
LINC00458-202ENST00000427299 APLNQ9ULZ1 77 aa2.93□□□□□ -1.94
LINC00458-202ENST00000427299 DNAH7Q8WXX0 4024 aa2.93□□□□□ -1.94
LINC00458-202ENST00000427299 LYSTQ99698 3801 aa2.93□□□□□ -1.94
LINC00458-202ENST00000427299 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
LINC00458-202ENST00000427299 VPS13DQ5THJ4 4388 aa2.92□□□□□ -1.94
LINC00458-202ENST00000427299 DNAH17Q9UFH2 4485 aa2.92□□□□□ -1.94
LINC00458-202ENST00000427299 DEFB116Q30KQ4 102 aa2.92□□□□□ -1.94
LINC00458-202ENST00000427299 PRKDCP78527 4128 aaKnown RBP2.91□□□□□ -1.94
LINC00458-202ENST00000427299 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 C8orf87E5RJ46 101 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 ASB16-AS1Q495Z4 193 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 COA5Q86WW8 74 aa2.91□□□□□ -1.94
LINC00458-202ENST00000427299 MRPL34Q9BQ48 92 aaKnown RBP2.91□□□□□ -1.94
LINC00458-202ENST00000427299 HECTD4Q9Y4D8 3996 aa2.9□□□□□ -1.94
LINC00458-202ENST00000427299 NBEAL1Q6ZS30 2694 aa2.9□□□□□ -1.94
LINC00458-202ENST00000427299 STAB1Q9NY15 2570 aa2.9□□□□□ -1.94
LINC00458-202ENST00000427299 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
LINC00458-202ENST00000427299 Q5VV11 94 aa2.89□□□□□ -1.95
LINC00458-202ENST00000427299 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
LINC00458-202ENST00000427299 Q96NJ1 140 aa2.89□□□□□ -1.95
LINC00458-202ENST00000427299 FBN3Q75N90 2809 aa2.89□□□□□ -1.95
LINC00458-202ENST00000427299 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
LINC00458-202ENST00000427299 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 A6NED7 52 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 A8MUN3 132 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 PMAIP1Q13794 54 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 CIRBP-AS1Q8TBR5 109 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 PLAC8Q9NZF1 115 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 FRAS1Q86XX4 4008 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
LINC00458-202ENST00000427299 NOTCH1P46531 2555 aa2.87□□□□□ -1.95
LINC00458-202ENST00000427299 STARD9Q9P2P6 4700 aa2.87□□□□□ -1.95
LINC00458-202ENST00000427299 A0A087WTM6 91 aa2.87□□□□□ -1.95
LINC00458-202ENST00000427299 CDC42SE1Q9NRR8 79 aa2.87□□□□□ -1.95
LINC00458-202ENST00000427299 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
LINC00458-202ENST00000427299 PCOTHQ58A44 107 aa2.86□□□□□ -1.95
LINC00458-202ENST00000427299 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
LINC00458-202ENST00000427299 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
LINC00458-202ENST00000427299 PSORS1C2Q9UIG4 136 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms