RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 PRR15Q8IV56 129 aa9.99□□□□□ -0.81
FN1-208ENST00000426059 SNURFQ9Y675 71 aa9.99□□□□□ -0.81
FN1-208ENST00000426059 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
FN1-208ENST00000426059 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
FN1-208ENST00000426059 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
FN1-208ENST00000426059 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
FN1-208ENST00000426059 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
FN1-208ENST00000426059 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
FN1-208ENST00000426059 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
FN1-208ENST00000426059 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
FN1-208ENST00000426059 NDUFB1O75438 58 aa9.94□□□□□ -0.82
FN1-208ENST00000426059 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
FN1-208ENST00000426059 SPINK1P00995 79 aa9.92□□□□□ -0.82
FN1-208ENST00000426059 ASB16-AS1Q495Z4 193 aa9.91□□□□□ -0.82
FN1-208ENST00000426059 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
FN1-208ENST00000426059 NDUFC1O43677 76 aa9.9□□□□□ -0.82
FN1-208ENST00000426059 Q8N1X5 172 aa9.9□□□□□ -0.82
FN1-208ENST00000426059 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
FN1-208ENST00000426059 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
FN1-208ENST00000426059 SMIM26A0A096LP01 95 aa9.89□□□□□ -0.83
FN1-208ENST00000426059 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
FN1-208ENST00000426059 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
FN1-208ENST00000426059 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
FN1-208ENST00000426059 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
FN1-208ENST00000426059 C8orf17Q9NRJ1 99 aa9.86□□□□□ -0.83
FN1-208ENST00000426059 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
FN1-208ENST00000426059 OCR1Q9BZK8 76 aa9.85□□□□□ -0.83
FN1-208ENST00000426059 ATP5EP56381 51 aaPredicted RBP9.85□□□□□ -0.83
FN1-208ENST00000426059 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
FN1-208ENST00000426059 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
FN1-208ENST00000426059 PRO0628Q9UI54 55 aa9.85□□□□□ -0.83
FN1-208ENST00000426059 TNXBP22105 4242 aa9.84□□□□□ -0.83
FN1-208ENST00000426059 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
FN1-208ENST00000426059 KRTAP4-5Q9BYR2 181 aa9.82□□□□□ -0.84
FN1-208ENST00000426059 FAT3Q8TDW7 4589 aa9.81□□□□□ -0.84
FN1-208ENST00000426059 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
FN1-208ENST00000426059 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
FN1-208ENST00000426059 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
FN1-208ENST00000426059 DMBT1Q9UGM3 2413 aaPredicted RBP9.75□□□□□ -0.85
FN1-208ENST00000426059 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
FN1-208ENST00000426059 LINC00313P59037 77 aa9.74□□□□□ -0.85
FN1-208ENST00000426059 NDUFS5O43920 106 aa9.73□□□□□ -0.85
FN1-208ENST00000426059 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
FN1-208ENST00000426059 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
FN1-208ENST00000426059 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
FN1-208ENST00000426059 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
FN1-208ENST00000426059 BRK1Q8WUW1 75 aa9.68□□□□□ -0.86
FN1-208ENST00000426059 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
FN1-208ENST00000426059 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
FN1-208ENST00000426059 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
FN1-208ENST00000426059 ABCA13Q86UQ4 5058 aa9.63□□□□□ -0.87
FN1-208ENST00000426059 H0Y9P7 68 aa9.61□□□□□ -0.87
FN1-208ENST00000426059 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
FN1-208ENST00000426059 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
FN1-208ENST00000426059 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.87
FN1-208ENST00000426059 Q5W150 140 aa9.58□□□□□ -0.88
FN1-208ENST00000426059 MP68P56378 58 aa9.58□□□□□ -0.88
FN1-208ENST00000426059 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
FN1-208ENST00000426059 HERC2O95714 4834 aa9.56□□□□□ -0.88
FN1-208ENST00000426059 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
FN1-208ENST00000426059 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.88
FN1-208ENST00000426059 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
FN1-208ENST00000426059 Q1T7F1 81 aa9.48□□□□□ -0.89
FN1-208ENST00000426059 IGLV7-46A0A075B6I9 117 aa9.45□□□□□ -0.9
FN1-208ENST00000426059 H3BPC8 53 aa9.44□□□□□ -0.9
FN1-208ENST00000426059 PRR4Q16378 134 aa9.44□□□□□ -0.9
FN1-208ENST00000426059 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
FN1-208ENST00000426059 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
FN1-208ENST00000426059 V9GYY9 64 aa9.42□□□□□ -0.9
FN1-208ENST00000426059 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
FN1-208ENST00000426059 A8MUU9 505 aa9.39□□□□□ -0.91
FN1-208ENST00000426059 J3QL48 77 aa9.39□□□□□ -0.91
FN1-208ENST00000426059 PSPHP1O15172 72 aa9.39□□□□□ -0.91
FN1-208ENST00000426059 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
FN1-208ENST00000426059 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
FN1-208ENST00000426059 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
FN1-208ENST00000426059 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
FN1-208ENST00000426059 LPAP08519 4548 aa9.32□□□□□ -0.92
FN1-208ENST00000426059 XP32Q5T750 250 aa9.31□□□□□ -0.92
FN1-208ENST00000426059 Q75L30 129 aa9.3□□□□□ -0.92
FN1-208ENST00000426059 A8MUN3 132 aa9.29□□□□□ -0.92
FN1-208ENST00000426059 SEC61GP60059 68 aa9.29□□□□□ -0.92
FN1-208ENST00000426059 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
FN1-208ENST00000426059 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
FN1-208ENST00000426059 LRP2P98164 4655 aa9.24□□□□□ -0.93
FN1-208ENST00000426059 HRES1P13985 223 aa9.23□□□□□ -0.93
FN1-208ENST00000426059 RPL37P61927 97 aaKnown RBP9.23□□□□□ -0.93
FN1-208ENST00000426059 Q5VV11 94 aa9.22□□□□□ -0.93
FN1-208ENST00000426059 TPRXLQ17RH7 258 aa9.21□□□□□ -0.93
FN1-208ENST00000426059 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.94
FN1-208ENST00000426059 C7orf65Q6ZTY9 151 aa9.2□□□□□ -0.94
FN1-208ENST00000426059 A8MU10 97 aa9.17□□□□□ -0.94
FN1-208ENST00000426059 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
FN1-208ENST00000426059 SPINK7P58062 85 aa9.16□□□□□ -0.94
FN1-208ENST00000426059 PRR15LQ9BU68 103 aa9.15□□□□□ -0.95
FN1-208ENST00000426059 HERC1Q15751 4861 aa9.13□□□□□ -0.95
FN1-208ENST00000426059 COA5Q86WW8 74 aa9.1□□□□□ -0.95
FN1-208ENST00000426059 A6NED7 52 aa9.05□□□□□ -0.96
FN1-208ENST00000426059 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
FN1-208ENST00000426059 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms