RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 LAMTOR3Q9UHA4 124 aa4.18□□□□□ -1.74
EPHA4-206ENST00000424339 TRBV7-4A0A0J9YYF1 115 aa4.17□□□□□ -1.74
EPHA4-206ENST00000424339 FLG2Q5D862 2391 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-206ENST00000424339 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
EPHA4-206ENST00000424339 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
EPHA4-206ENST00000424339 A0A087WVE0 104 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 F8WEM9 126 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 C9orf153Q5TBE3 101 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 SSBP3-AS1Q7Z2R9 100 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 Q8NBF4 154 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
EPHA4-206ENST00000424339 A0A087X002 238 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-206ENST00000424339 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 Q8N377 158 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 DSCR8Q96T75 97 aa4.14□□□□□ -1.75
EPHA4-206ENST00000424339 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
EPHA4-206ENST00000424339 Q6ZVQ6 151 aa4.13□□□□□ -1.75
EPHA4-206ENST00000424339 IGLV8-61A0A075B6I0 122 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 CXCL6P80162 114 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 MOBPQ13875 183 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
EPHA4-206ENST00000424339 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
EPHA4-206ENST00000424339 SPINK1P00995 79 aa4.11□□□□□ -1.75
EPHA4-206ENST00000424339 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
EPHA4-206ENST00000424339 CD164Q04900 197 aa4.11□□□□□ -1.75
EPHA4-206ENST00000424339 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
EPHA4-206ENST00000424339 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
EPHA4-206ENST00000424339 TMEM258P61165 79 aa4.08□□□□□ -1.76
EPHA4-206ENST00000424339 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
EPHA4-206ENST00000424339 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
EPHA4-206ENST00000424339 LIMD2Q9BT23 127 aa4.08□□□□□ -1.76
EPHA4-206ENST00000424339 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
EPHA4-206ENST00000424339 DMBT1Q9UGM3 2413 aaPredicted RBP4.07□□□□□ -1.76
EPHA4-206ENST00000424339 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
EPHA4-206ENST00000424339 A0A1B0GW54 56 aa4.07□□□□□ -1.76
EPHA4-206ENST00000424339 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
EPHA4-206ENST00000424339 Q5XG85 94 aa4.06□□□□□ -1.76
EPHA4-206ENST00000424339 IGFL1Q6UW32 110 aa4.06□□□□□ -1.76
EPHA4-206ENST00000424339 IGKV4-1P06312 121 aa4.05□□□□□ -1.76
EPHA4-206ENST00000424339 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
EPHA4-206ENST00000424339 J3KT08 172 aa4.04□□□□□ -1.76
EPHA4-206ENST00000424339 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
EPHA4-206ENST00000424339 KLKP1Q107X0 134 aa4.03□□□□□ -1.76
EPHA4-206ENST00000424339 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
EPHA4-206ENST00000424339 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
EPHA4-206ENST00000424339 NREPQ16612 68 aa4.02□□□□□ -1.77
EPHA4-206ENST00000424339 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
EPHA4-206ENST00000424339 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
EPHA4-206ENST00000424339 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
EPHA4-206ENST00000424339 TNXBP22105 4242 aa4.02□□□□□ -1.77
EPHA4-206ENST00000424339 H7BZZ5 65 aa4.01□□□□□ -1.77
EPHA4-206ENST00000424339 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
EPHA4-206ENST00000424339 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
EPHA4-206ENST00000424339 BPY2O14599 106 aa4□□□□□ -1.77
EPHA4-206ENST00000424339 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
EPHA4-206ENST00000424339 OCR1Q9BZK8 76 aa4□□□□□ -1.77
EPHA4-206ENST00000424339 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
EPHA4-206ENST00000424339 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
EPHA4-206ENST00000424339 Q8N9L7 120 aa3.99□□□□□ -1.77
EPHA4-206ENST00000424339 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
EPHA4-206ENST00000424339 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
EPHA4-206ENST00000424339 A0A087WSZ3 146 aa3.98□□□□□ -1.77
EPHA4-206ENST00000424339 A0A0G2JQZ4 141 aa3.98□□□□□ -1.77
EPHA4-206ENST00000424339 NDUFC1O43677 76 aa3.98□□□□□ -1.77
EPHA4-206ENST00000424339 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
EPHA4-206ENST00000424339 DSCR10P59022 87 aa3.97□□□□□ -1.77
EPHA4-206ENST00000424339 A0A0U1RQV1 116 aa3.96□□□□□ -1.78
EPHA4-206ENST00000424339 ATP5EP56381 51 aaPredicted RBP3.96□□□□□ -1.78
EPHA4-206ENST00000424339 PRR4Q16378 134 aa3.96□□□□□ -1.78
EPHA4-206ENST00000424339 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
EPHA4-206ENST00000424339 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
EPHA4-206ENST00000424339 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
EPHA4-206ENST00000424339 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
EPHA4-206ENST00000424339 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
EPHA4-206ENST00000424339 C1orf195Q5TG92 126 aa3.95□□□□□ -1.78
EPHA4-206ENST00000424339 RETNLBQ9BQ08 111 aa3.94□□□□□ -1.78
EPHA4-206ENST00000424339 K7EQZ3 153 aa3.93□□□□□ -1.78
EPHA4-206ENST00000424339 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
EPHA4-206ENST00000424339 LINC00472Q9H8W2 130 aa3.92□□□□□ -1.78
EPHA4-206ENST00000424339 HCG22E2RYF7 251 aa3.91□□□□□ -1.78
EPHA4-206ENST00000424339 Q96NJ1 140 aa3.91□□□□□ -1.78
EPHA4-206ENST00000424339 NDUFB1O75438 58 aa3.9□□□□□ -1.79
EPHA4-206ENST00000424339 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
EPHA4-206ENST00000424339 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
EPHA4-206ENST00000424339 A8MWP4 228 aa3.88□□□□□ -1.79
EPHA4-206ENST00000424339 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
EPHA4-206ENST00000424339 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
EPHA4-206ENST00000424339 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
EPHA4-206ENST00000424339 HERC1Q15751 4861 aa3.87□□□□□ -1.79
EPHA4-206ENST00000424339 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
EPHA4-206ENST00000424339 SEC61GP60059 68 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms