RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
C9orf3-204ENST00000424143 A6NN06 94 aa8.98□□□□□ -0.97
C9orf3-204ENST00000424143 RTL8CO15255 209 aa8.98□□□□□ -0.97
C9orf3-204ENST00000424143 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
C9orf3-204ENST00000424143 A0A087X002 238 aa8.96□□□□□ -0.98
C9orf3-204ENST00000424143 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
C9orf3-204ENST00000424143 ACYP2P14621 99 aa8.95□□□□□ -0.98
C9orf3-204ENST00000424143 COL6A5A8TX70 2615 aa8.95□□□□□ -0.98
C9orf3-204ENST00000424143 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
C9orf3-204ENST00000424143 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
C9orf3-204ENST00000424143 Q5W150 140 aa8.92□□□□□ -0.98
C9orf3-204ENST00000424143 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
C9orf3-204ENST00000424143 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
C9orf3-204ENST00000424143 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
C9orf3-204ENST00000424143 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
C9orf3-204ENST00000424143 PLECQ15149 4684 aaKnown RBP8.88□□□□□ -0.99
C9orf3-204ENST00000424143 DNAH17Q9UFH2 4485 aa8.88□□□□□ -0.99
C9orf3-204ENST00000424143 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
C9orf3-204ENST00000424143 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
C9orf3-204ENST00000424143 SPINK7P58062 85 aa8.86□□□□□ -0.99
C9orf3-204ENST00000424143 ALMS1Q8TCU4 4167 aa8.85□□□□□ -0.99
C9orf3-204ENST00000424143 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
C9orf3-204ENST00000424143 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
C9orf3-204ENST00000424143 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
C9orf3-204ENST00000424143 LINC00313P59037 77 aa8.83□□□□□ -1
C9orf3-204ENST00000424143 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
C9orf3-204ENST00000424143 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
C9orf3-204ENST00000424143 IGKV2-30P06310 120 aa8.81□□□□□ -1
C9orf3-204ENST00000424143 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
C9orf3-204ENST00000424143 DNAH7Q8WXX0 4024 aa8.81□□□□□ -1
C9orf3-204ENST00000424143 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
C9orf3-204ENST00000424143 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
C9orf3-204ENST00000424143 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
C9orf3-204ENST00000424143 KRTAP16-1A8MUX0 517 aa8.74□□□□□ -1.01
C9orf3-204ENST00000424143 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
C9orf3-204ENST00000424143 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.01
C9orf3-204ENST00000424143 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
C9orf3-204ENST00000424143 A0A1B0GU69 56 aa8.69□□□□□ -1.02
C9orf3-204ENST00000424143 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
C9orf3-204ENST00000424143 DNAH6Q9C0G6 4158 aa8.67□□□□□ -1.02
C9orf3-204ENST00000424143 Q6ZSA8 131 aa8.65□□□□□ -1.02
C9orf3-204ENST00000424143 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.03
C9orf3-204ENST00000424143 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
C9orf3-204ENST00000424143 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
C9orf3-204ENST00000424143 UQCR11O14957 56 aa8.62□□□□□ -1.03
C9orf3-204ENST00000424143 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
C9orf3-204ENST00000424143 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
C9orf3-204ENST00000424143 MIR22HGQ0VDD5 57 aa8.58□□□□□ -1.04
C9orf3-204ENST00000424143 SPINK1P00995 79 aa8.56□□□□□ -1.04
C9orf3-204ENST00000424143 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
C9orf3-204ENST00000424143 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
C9orf3-204ENST00000424143 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
C9orf3-204ENST00000424143 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
C9orf3-204ENST00000424143 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
C9orf3-204ENST00000424143 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
C9orf3-204ENST00000424143 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
C9orf3-204ENST00000424143 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
C9orf3-204ENST00000424143 LY6G6CO95867 125 aa8.5□□□□□ -1.05
C9orf3-204ENST00000424143 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
C9orf3-204ENST00000424143 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
C9orf3-204ENST00000424143 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
C9orf3-204ENST00000424143 TGP01266 2768 aa8.4□□□□□ -1.06
C9orf3-204ENST00000424143 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
C9orf3-204ENST00000424143 LINC00304Q8N9R0 145 aa8.36□□□□□ -1.07
C9orf3-204ENST00000424143 LRP1BQ9NZR2 4599 aa8.35□□□□□ -1.07
C9orf3-204ENST00000424143 A8MUU9 505 aa8.35□□□□□ -1.07
C9orf3-204ENST00000424143 C20orf166-AS1Q96NR2 134 aa8.35□□□□□ -1.07
C9orf3-204ENST00000424143 LINC01554Q52M75 96 aa8.34□□□□□ -1.07
C9orf3-204ENST00000424143 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
C9orf3-204ENST00000424143 PKD1P98161 4303 aa8.33□□□□□ -1.08
C9orf3-204ENST00000424143 KRTAP21-3Q3LHN1 58 aa8.32□□□□□ -1.08
C9orf3-204ENST00000424143 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
C9orf3-204ENST00000424143 Q8N1X5 172 aa8.29□□□□□ -1.08
C9orf3-204ENST00000424143 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
C9orf3-204ENST00000424143 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
C9orf3-204ENST00000424143 H0YAA0 97 aa8.21□□□□□ -1.1
C9orf3-204ENST00000424143 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
C9orf3-204ENST00000424143 A0A1B0GU33 70 aa8.19□□□□□ -1.1
C9orf3-204ENST00000424143 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
C9orf3-204ENST00000424143 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
C9orf3-204ENST00000424143 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
C9orf3-204ENST00000424143 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
C9orf3-204ENST00000424143 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
C9orf3-204ENST00000424143 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
C9orf3-204ENST00000424143 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
C9orf3-204ENST00000424143 K7ERS5 55 aa8.04□□□□□ -1.12
C9orf3-204ENST00000424143 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
C9orf3-204ENST00000424143 APOBP04114 4563 aaKnown RBP8□□□□□ -1.13
C9orf3-204ENST00000424143 A0A1B0GVY2 172 aa8□□□□□ -1.13
C9orf3-204ENST00000424143 HYDINQ4G0P3 5121 aa7.95□□□□□ -1.14
C9orf3-204ENST00000424143 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
C9orf3-204ENST00000424143 DYNC1H1Q14204 4646 aaKnown RBP7.94□□□□□ -1.14
C9orf3-204ENST00000424143 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-204ENST00000424143 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
C9orf3-204ENST00000424143 ROMO1P60602 79 aa7.87□□□□□ -1.15
C9orf3-204ENST00000424143 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
C9orf3-204ENST00000424143 RPL37P61927 97 aaKnown RBP7.85□□□□□ -1.15
C9orf3-204ENST00000424143 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
C9orf3-204ENST00000424143 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
C9orf3-204ENST00000424143 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms