RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CCKP06307 115 aa7.71□□□□□ -1.18
CHCHD3-202ENST00000423635 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
CHCHD3-202ENST00000423635 H3BQ85 93 aa7.67□□□□□ -1.18
CHCHD3-202ENST00000423635 A0A1B0GV72 72 aa7.66□□□□□ -1.18
CHCHD3-202ENST00000423635 COX8AP10176 69 aa7.65□□□□□ -1.18
CHCHD3-202ENST00000423635 MT1BP07438 61 aa7.64□□□□□ -1.19
CHCHD3-202ENST00000423635 ORMDL1Q9P0S3 153 aa7.64□□□□□ -1.19
CHCHD3-202ENST00000423635 J3KT08 172 aa7.63□□□□□ -1.19
CHCHD3-202ENST00000423635 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
CHCHD3-202ENST00000423635 DLEU1O43261 78 aa7.63□□□□□ -1.19
CHCHD3-202ENST00000423635 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
CHCHD3-202ENST00000423635 LYRM7Q5U5X0 104 aa7.61□□□□□ -1.19
CHCHD3-202ENST00000423635 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
CHCHD3-202ENST00000423635 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
CHCHD3-202ENST00000423635 DNAL4O96015 105 aa7.6□□□□□ -1.19
CHCHD3-202ENST00000423635 PRO1854Q9UHT4 67 aa7.6□□□□□ -1.19
CHCHD3-202ENST00000423635 TRIAP1O43715 76 aa7.59□□□□□ -1.19
CHCHD3-202ENST00000423635 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
CHCHD3-202ENST00000423635 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
CHCHD3-202ENST00000423635 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
CHCHD3-202ENST00000423635 HIGD1BQ9P298 99 aa7.58□□□□□ -1.2
CHCHD3-202ENST00000423635 NDUFB1O75438 58 aa7.57□□□□□ -1.2
CHCHD3-202ENST00000423635 UBE2V1Q13404 147 aa7.57□□□□□ -1.2
CHCHD3-202ENST00000423635 Q5VV11 94 aa7.57□□□□□ -1.2
CHCHD3-202ENST00000423635 DSCR8Q96T75 97 aa7.57□□□□□ -1.2
CHCHD3-202ENST00000423635 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
CHCHD3-202ENST00000423635 S100A2P29034 98 aa7.55□□□□□ -1.2
CHCHD3-202ENST00000423635 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
CHCHD3-202ENST00000423635 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
CHCHD3-202ENST00000423635 C21orf62-AS1Q17RA5 79 aa7.53□□□□□ -1.2
CHCHD3-202ENST00000423635 CEND1Q8N111 149 aa7.52□□□□□ -1.21
CHCHD3-202ENST00000423635 RBM3P98179 157 aaKnown RBP7.51□□□□□ -1.21
CHCHD3-202ENST00000423635 Q6ZQT0 140 aa7.51□□□□□ -1.21
CHCHD3-202ENST00000423635 Q6ZVQ6 151 aa7.51□□□□□ -1.21
CHCHD3-202ENST00000423635 C14orf144Q96I85 54 aa7.51□□□□□ -1.21
CHCHD3-202ENST00000423635 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
CHCHD3-202ENST00000423635 C2orf91Q6ZV80 131 aa7.5□□□□□ -1.21
CHCHD3-202ENST00000423635 FXYD2P54710 66 aa7.46□□□□□ -1.22
CHCHD3-202ENST00000423635 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
CHCHD3-202ENST00000423635 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
CHCHD3-202ENST00000423635 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
CHCHD3-202ENST00000423635 PSMB2P49721 201 aa7.44□□□□□ -1.22
CHCHD3-202ENST00000423635 C9JAW5 83 aa7.43□□□□□ -1.22
CHCHD3-202ENST00000423635 COX6CP09669 75 aa7.43□□□□□ -1.22
CHCHD3-202ENST00000423635 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
CHCHD3-202ENST00000423635 PRR15Q8IV56 129 aa7.4□□□□□ -1.22
CHCHD3-202ENST00000423635 TMEM254Q8TBM7 123 aa7.4□□□□□ -1.22
CHCHD3-202ENST00000423635 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
CHCHD3-202ENST00000423635 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
CHCHD3-202ENST00000423635 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
CHCHD3-202ENST00000423635 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
CHCHD3-202ENST00000423635 A0A1B0GW54 56 aa7.37□□□□□ -1.23
CHCHD3-202ENST00000423635 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
CHCHD3-202ENST00000423635 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
CHCHD3-202ENST00000423635 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
CHCHD3-202ENST00000423635 S100A6P06703 90 aa7.35□□□□□ -1.23
CHCHD3-202ENST00000423635 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
CHCHD3-202ENST00000423635 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
CHCHD3-202ENST00000423635 K7ERJ3 54 aa7.33□□□□□ -1.24
CHCHD3-202ENST00000423635 SPRR2EP22531 72 aa7.33□□□□□ -1.24
CHCHD3-202ENST00000423635 SPRR2BP35325 72 aa7.33□□□□□ -1.24
CHCHD3-202ENST00000423635 SPRR2AP35326 72 aa7.33□□□□□ -1.24
CHCHD3-202ENST00000423635 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
CHCHD3-202ENST00000423635 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
CHCHD3-202ENST00000423635 Q5W150 140 aa7.31□□□□□ -1.24
CHCHD3-202ENST00000423635 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
CHCHD3-202ENST00000423635 NDUFS5O43920 106 aa7.3□□□□□ -1.24
CHCHD3-202ENST00000423635 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
CHCHD3-202ENST00000423635 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
CHCHD3-202ENST00000423635 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
CHCHD3-202ENST00000423635 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
CHCHD3-202ENST00000423635 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.24
CHCHD3-202ENST00000423635 IMUPQ9GZP8 106 aa7.27□□□□□ -1.24
CHCHD3-202ENST00000423635 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
CHCHD3-202ENST00000423635 HSD52Q0P140 79 aa7.26□□□□□ -1.25
CHCHD3-202ENST00000423635 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
CHCHD3-202ENST00000423635 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
CHCHD3-202ENST00000423635 H3BS24 57 aa7.25□□□□□ -1.25
CHCHD3-202ENST00000423635 S4R3F8 94 aa7.25□□□□□ -1.25
CHCHD3-202ENST00000423635 NREPQ16612 68 aa7.24□□□□□ -1.25
CHCHD3-202ENST00000423635 PDE6GP18545 87 aa7.23□□□□□ -1.25
CHCHD3-202ENST00000423635 S100A1P23297 94 aa7.22□□□□□ -1.25
CHCHD3-202ENST00000423635 LCA10Q71F78 164 aa7.22□□□□□ -1.25
CHCHD3-202ENST00000423635 K7EQZ3 153 aa7.21□□□□□ -1.26
CHCHD3-202ENST00000423635 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
CHCHD3-202ENST00000423635 KRTAP4-12Q9BQ66 201 aa7.19□□□□□ -1.26
CHCHD3-202ENST00000423635 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
CHCHD3-202ENST00000423635 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
CHCHD3-202ENST00000423635 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
CHCHD3-202ENST00000423635 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
CHCHD3-202ENST00000423635 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
CHCHD3-202ENST00000423635 SPRR2DP22532 72 aa7.09□□□□□ -1.27
CHCHD3-202ENST00000423635 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
CHCHD3-202ENST00000423635 CXCL6P80162 114 aa7.08□□□□□ -1.28
CHCHD3-202ENST00000423635 CASC2Q6XLA1 102 aa7.06□□□□□ -1.28
CHCHD3-202ENST00000423635 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
CHCHD3-202ENST00000423635 BPY2O14599 106 aa7.04□□□□□ -1.28
CHCHD3-202ENST00000423635 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
CHCHD3-202ENST00000423635 MT1XP80297 61 aa7.02□□□□□ -1.28
CHCHD3-202ENST00000423635 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms