RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 IGLV5-39A0A0G2JS06 123 aa2.28□□□□□ -2.04
TOP2A-201ENST00000423485 CSAG1Q6PB30 78 aa2.28□□□□□ -2.05
TOP2A-201ENST00000423485 POLR2KP53803 58 aaKnown RBP2.27□□□□□ -2.05
TOP2A-201ENST00000423485 KRTAP10-2P60368 255 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 CCKP06307 115 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 LINC01554Q52M75 96 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 SPANXA2-OT1Q8N9U9 137 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 PLAC8Q9NZF1 115 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 M0QY20 66 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 FAM30AQ9NZY2 134 aa2.27□□□□□ -2.05
TOP2A-201ENST00000423485 Q6ZR54 194 aa2.26□□□□□ -2.05
TOP2A-201ENST00000423485 ST20-AS1Q8NBB2 130 aa2.26□□□□□ -2.05
TOP2A-201ENST00000423485 RPL39P62891 51 aaKnown RBP2.25□□□□□ -2.05
TOP2A-201ENST00000423485 HCG22E2RYF7 251 aa2.25□□□□□ -2.05
TOP2A-201ENST00000423485 WFDC13Q8IUB5 93 aa2.25□□□□□ -2.05
TOP2A-201ENST00000423485 A0A087WSZ3 146 aa2.25□□□□□ -2.05
TOP2A-201ENST00000423485 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
TOP2A-201ENST00000423485 A8MUN3 132 aa2.24□□□□□ -2.05
TOP2A-201ENST00000423485 TRIAP1O43715 76 aa2.24□□□□□ -2.05
TOP2A-201ENST00000423485 LCA10Q71F78 164 aa2.24□□□□□ -2.05
TOP2A-201ENST00000423485 KTN1-AS1Q86SY8 53 aa2.24□□□□□ -2.05
TOP2A-201ENST00000423485 H7BZZ5 65 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 ENHOQ6UWT2 76 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 IGKV3D-7A0A0C4DH55 119 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 PRR9Q5T870 116 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 CDKN2A-AS1Q9UH64 79 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 K7ERJ3 54 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 NTM-AS1Q6ZSK4 140 aa2.23□□□□□ -2.05
TOP2A-201ENST00000423485 A8MWP4 228 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
TOP2A-201ENST00000423485 CRIP1P50238 77 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 Q6ZQY7 126 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 KMT2DO14686 5537 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 FAM218AQ96MZ4 157 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
TOP2A-201ENST00000423485 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.05
TOP2A-201ENST00000423485 IGFL1Q6UW32 110 aa2.21□□□□□ -2.05
TOP2A-201ENST00000423485 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.06
TOP2A-201ENST00000423485 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
TOP2A-201ENST00000423485 IGLV4-3A0A075B6K6 122 aa2.21□□□□□ -2.06
TOP2A-201ENST00000423485 TRBV7-4A0A0J9YYF1 115 aa2.21□□□□□ -2.06
TOP2A-201ENST00000423485 LOC101927531A0A1B0GV80 90 aa2.21□□□□□ -2.06
TOP2A-201ENST00000423485 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 TP53AIP1Q9HCN2 124 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 C6orf48Q9UBA6 75 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 HERC2O95714 4834 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 LINC00308Q8TCZ7 52 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 K7EQZ3 153 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 ADAMTSL4-AS1Q5T5F5 129 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-201ENST00000423485 Q75L30 129 aa2.2□□□□□ -2.06
TOP2A-201ENST00000423485 C4orf26Q17RF5 130 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 TLX1NBP0CAT3 122 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 DSCR10P59022 87 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 S4R3F8 94 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 LINC00483Q53H64 154 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 Q6ZRX8 168 aa2.19□□□□□ -2.06
TOP2A-201ENST00000423485 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
TOP2A-201ENST00000423485 KRTAP19-1Q8IUB9 90 aa2.18□□□□□ -2.06
TOP2A-201ENST00000423485 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
TOP2A-201ENST00000423485 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
TOP2A-201ENST00000423485 Q8NDZ9 215 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 TRAV22A0A0B4J277 110 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 ANAPC11Q9NYG5 84 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 R4GN34 69 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 C15orf56Q8N910 161 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 BRK1Q8WUW1 75 aa2.17□□□□□ -2.06
TOP2A-201ENST00000423485 Q6ZQT0 140 aa2.16□□□□□ -2.06
TOP2A-201ENST00000423485 TMEM254Q8TBM7 123 aa2.16□□□□□ -2.06
TOP2A-201ENST00000423485 KRTAP9-2Q9BYQ4 174 aa2.16□□□□□ -2.06
TOP2A-201ENST00000423485 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
TOP2A-201ENST00000423485 FAM168BA1KXE4 195 aa2.16□□□□□ -2.06
TOP2A-201ENST00000423485 C11orf21Q9P2W6 132 aa2.15□□□□□ -2.06
TOP2A-201ENST00000423485 KCNQ1DNQ9H478 68 aa2.15□□□□□ -2.07
TOP2A-201ENST00000423485 TSPEAR-AS2P59090 65 aa2.15□□□□□ -2.07
TOP2A-201ENST00000423485 OCR1Q9BZK8 76 aa2.15□□□□□ -2.07
TOP2A-201ENST00000423485 PRR34Q9NV39 138 aa2.15□□□□□ -2.07
TOP2A-201ENST00000423485 Q5W150 140 aa2.14□□□□□ -2.07
TOP2A-201ENST00000423485 A0A1W2PNM2 257 aa2.14□□□□□ -2.07
TOP2A-201ENST00000423485 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
TOP2A-201ENST00000423485 IGLV5-48A0A075B6I7 105 aa2.13□□□□□ -2.07
TOP2A-201ENST00000423485 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
TOP2A-201ENST00000423485 Q8N3U1 123 aa2.13□□□□□ -2.07
TOP2A-201ENST00000423485 MRPL34Q9BQ48 92 aaKnown RBP2.13□□□□□ -2.07
TOP2A-201ENST00000423485 RPS29P62273 56 aaKnown RBP2.13□□□□□ -2.07
TOP2A-201ENST00000423485 A6NN06 94 aa2.13□□□□□ -2.07
TOP2A-201ENST00000423485 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
TOP2A-201ENST00000423485 SMIM1B2RUZ4 78 aa2.12□□□□□ -2.07
TOP2A-201ENST00000423485 DEFB116Q30KQ4 102 aa2.12□□□□□ -2.07
TOP2A-201ENST00000423485 SPINT4Q6UDR6 99 aa2.12□□□□□ -2.07
TOP2A-201ENST00000423485 TPRXLQ17RH7 258 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms