RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 ATRXP46100 2492 aa2.69□□□□□ -1.98
SCG2-202ENST00000421386 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
SCG2-202ENST00000421386 FN1P02751 2386 aaKnown RBP2.67□□□□□ -1.98
SCG2-202ENST00000421386 ADGRG4Q8IZF6 3080 aa2.67□□□□□ -1.98
SCG2-202ENST00000421386 A0A1B0GVY2 172 aa2.67□□□□□ -1.98
SCG2-202ENST00000421386 Q6ZRN7 208 aaPredicted RBP2.67□□□□□ -1.98
SCG2-202ENST00000421386 DEFB123Q8N688 67 aa2.67□□□□□ -1.98
SCG2-202ENST00000421386 MAPK1IP1LQ8NDC0 245 aa2.67□□□□□ -1.98
SCG2-202ENST00000421386 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
SCG2-202ENST00000421386 COL12A1Q99715 3063 aa2.66□□□□□ -1.98
SCG2-202ENST00000421386 SPENQ96T58 3664 aaKnown RBP2.66□□□□□ -1.98
SCG2-202ENST00000421386 DMXL1Q9Y485 3027 aa2.66□□□□□ -1.98
SCG2-202ENST00000421386 SMG1Q96Q15 3661 aaKnown RBP2.65□□□□□ -1.98
SCG2-202ENST00000421386 APCP25054 2843 aa2.65□□□□□ -1.99
SCG2-202ENST00000421386 PTPN13Q12923 2485 aa2.65□□□□□ -1.99
SCG2-202ENST00000421386 CELSR1Q9NYQ6 3014 aa2.65□□□□□ -1.99
SCG2-202ENST00000421386 JMJD1CQ15652 2540 aa2.65□□□□□ -1.99
SCG2-202ENST00000421386 F8P00451 2351 aa2.64□□□□□ -1.99
SCG2-202ENST00000421386 HIVEP3Q5T1R4 2406 aa2.64□□□□□ -1.99
SCG2-202ENST00000421386 LRBAP50851 2863 aa2.64□□□□□ -1.99
SCG2-202ENST00000421386 INE1O15225 51 aa2.63□□□□□ -1.99
SCG2-202ENST00000421386 APLNQ9ULZ1 77 aa2.63□□□□□ -1.99
SCG2-202ENST00000421386 HIVEP2P31629 2446 aa2.62□□□□□ -1.99
SCG2-202ENST00000421386 OTOGLQ3ZCN5 2332 aa2.62□□□□□ -1.99
SCG2-202ENST00000421386 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
SCG2-202ENST00000421386 ANKRD11Q6UB99 2663 aaPredicted RBP2.62□□□□□ -1.99
SCG2-202ENST00000421386 ATMQ13315 3056 aa2.61□□□□□ -1.99
SCG2-202ENST00000421386 ZFYVE26Q68DK2 2539 aa2.61□□□□□ -1.99
SCG2-202ENST00000421386 RPS29P62273 56 aaKnown RBP2.61□□□□□ -1.99
SCG2-202ENST00000421386 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
SCG2-202ENST00000421386 NAV2Q8IVL1 2488 aa2.61□□□□□ -1.99
SCG2-202ENST00000421386 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 A0A0D9SG42 100 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 NF1P21359 2839 aa2.6□□□□□ -1.99
SCG2-202ENST00000421386 MYO15AQ9UKN7 3530 aa2.59□□□□□ -1.99
SCG2-202ENST00000421386 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
SCG2-202ENST00000421386 MYO9AB2RTY4 2548 aa2.58□□□□□ -2
SCG2-202ENST00000421386 UTP20O75691 2785 aaKnown RBP2.58□□□□□ -2
SCG2-202ENST00000421386 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
SCG2-202ENST00000421386 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
SCG2-202ENST00000421386 CEP295Q9C0D2 2601 aa2.57□□□□□ -2
SCG2-202ENST00000421386 M0QZ58 72 aa2.57□□□□□ -2
SCG2-202ENST00000421386 USP9XQ93008 2570 aaPredicted RBP2.56□□□□□ -2
SCG2-202ENST00000421386 UBR5O95071 2799 aaPredicted RBP2.55□□□□□ -2
SCG2-202ENST00000421386 GCN1Q92616 2671 aaKnown RBP2.55□□□□□ -2
SCG2-202ENST00000421386 AKAP9Q99996 3911 aa2.54□□□□□ -2
SCG2-202ENST00000421386 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
SCG2-202ENST00000421386 KRTAP13-2Q52LG2 175 aa2.54□□□□□ -2
SCG2-202ENST00000421386 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SCG2-202ENST00000421386 R4GN34 69 aa2.54□□□□□ -2
SCG2-202ENST00000421386 DOPEY1Q5JWR5 2465 aa2.53□□□□□ -2
SCG2-202ENST00000421386 LCE3AQ5TA76 89 aa2.53□□□□□ -2
SCG2-202ENST00000421386 MTORP42345 2549 aa2.53□□□□□ -2
SCG2-202ENST00000421386 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
SCG2-202ENST00000421386 UNC79Q9P2D8 2635 aa2.52□□□□□ -2.01
SCG2-202ENST00000421386 ZFHX2Q9C0A1 2572 aaPredicted RBP2.52□□□□□ -2.01
SCG2-202ENST00000421386 NBEAL2Q6ZNJ1 2754 aa2.51□□□□□ -2.01
SCG2-202ENST00000421386 CCDC168Q8NDH2 2452 aa2.51□□□□□ -2.01
SCG2-202ENST00000421386 ZNF462Q96JM2 2506 aa2.5□□□□□ -2.01
SCG2-202ENST00000421386 NOTCH2Q04721 2471 aa2.5□□□□□ -2.01
SCG2-202ENST00000421386 RELNP78509 3460 aa2.49□□□□□ -2.01
SCG2-202ENST00000421386 ASPMQ8IZT6 3477 aa2.49□□□□□ -2.01
SCG2-202ENST00000421386 MXRA5Q9NR99 2828 aa2.49□□□□□ -2.01
SCG2-202ENST00000421386 CRYBG3Q68DQ2 2970 aa2.49□□□□□ -2.01
SCG2-202ENST00000421386 PIEZO1Q92508 2521 aa2.48□□□□□ -2.01
SCG2-202ENST00000421386 LAMA5O15230 3695 aa2.48□□□□□ -2.01
SCG2-202ENST00000421386 NBPF19A0A087WUL8 3843 aa2.48□□□□□ -2.01
SCG2-202ENST00000421386 CENPEQ02224 2701 aa2.48□□□□□ -2.01
SCG2-202ENST00000421386 PKD1L2Q7Z442 2459 aa2.47□□□□□ -2.01
SCG2-202ENST00000421386 SRRM2Q9UQ35 2752 aaKnown RBP2.47□□□□□ -2.01
SCG2-202ENST00000421386 CHD8Q9HCK8 2581 aa2.47□□□□□ -2.01
SCG2-202ENST00000421386 USP9YO00507 2555 aaPredicted RBP2.46□□□□□ -2.02
SCG2-202ENST00000421386 KRTAP1-4P0C5Y4 121 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 KRTAP10-8P60410 259 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 BSNQ9UPA5 3926 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 TENM4Q6N022 2769 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 TTC28Q96AY4 2481 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 EPG5Q9HCE0 2579 aa2.46□□□□□ -2.02
SCG2-202ENST00000421386 EYSQ5T1H1 3165 aa2.45□□□□□ -2.02
SCG2-202ENST00000421386 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
SCG2-202ENST00000421386 HIVEP1P15822 2718 aa2.44□□□□□ -2.02
SCG2-202ENST00000421386 LRRK2Q5S007 2527 aa2.44□□□□□ -2.02
SCG2-202ENST00000421386 SVEP1Q4LDE5 3571 aa2.44□□□□□ -2.02
SCG2-202ENST00000421386 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
SCG2-202ENST00000421386 VWFP04275 2813 aa2.43□□□□□ -2.02
SCG2-202ENST00000421386 COL6A5A8TX70 2615 aa2.43□□□□□ -2.02
SCG2-202ENST00000421386 HELZ2Q9BYK8 2649 aaKnown RBP2.43□□□□□ -2.02
SCG2-202ENST00000421386 HECTD1Q9ULT8 2610 aa2.43□□□□□ -2.02
SCG2-202ENST00000421386 NIPBLQ6KC79 2804 aaeCLIP2.42□□□□□ -2.02
SCG2-202ENST00000421386 CFAP46Q8IYW2 2715 aa2.41□□□□□ -2.02
SCG2-202ENST00000421386 ACANP16112 2415 aa2.41□□□□□ -2.02
SCG2-202ENST00000421386 Q5VSD8 79 aa2.41□□□□□ -2.02
SCG2-202ENST00000421386 BAHCC1Q9P281 2608 aa2.41□□□□□ -2.02
SCG2-202ENST00000421386 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
SCG2-202ENST00000421386 SMR3AQ99954 134 aa2.4□□□□□ -2.03
SCG2-202ENST00000421386 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
SCG2-202ENST00000421386 TGP01266 2768 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms