RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
UPF3AP3-201ENST00000420996 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
UPF3AP3-201ENST00000420996 TRIAP1O43715 76 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 HSD52Q0P140 79 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 KRTAP19-6Q3LI70 58 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 ANKRD29Q8N6D5 301 aa8.23□□□□□ -1.09
UPF3AP3-201ENST00000420996 A0A1B0GV90 55 aa8.22□□□□□ -1.09
UPF3AP3-201ENST00000420996 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
UPF3AP3-201ENST00000420996 DEFB116Q30KQ4 102 aa8.21□□□□□ -1.1
UPF3AP3-201ENST00000420996 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
UPF3AP3-201ENST00000420996 A0A1B0GV72 72 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 H3BQ85 93 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 TRACP01848 142 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 CCKP06307 115 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 SPINK7P58062 85 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 C21orf62-AS1Q17RA5 79 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 A8MWP4 228 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 DNAL4O96015 105 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
UPF3AP3-201ENST00000420996 PSMB2P49721 201 aa8.11□□□□□ -1.11
UPF3AP3-201ENST00000420996 GTF2H5Q6ZYL4 71 aa8.09□□□□□ -1.11
UPF3AP3-201ENST00000420996 KRTAP6-3Q3LI67 103 aa8.07□□□□□ -1.12
UPF3AP3-201ENST00000420996 C9orf118A6NHY6 69 aa8.06□□□□□ -1.12
UPF3AP3-201ENST00000420996 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
UPF3AP3-201ENST00000420996 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
UPF3AP3-201ENST00000420996 LYRM7Q5U5X0 104 aa8.04□□□□□ -1.12
UPF3AP3-201ENST00000420996 COX6CP09669 75 aa8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 J3KT08 172 aa8.02□□□□□ -1.13
UPF3AP3-201ENST00000420996 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
UPF3AP3-201ENST00000420996 SCGB1C2P0DMR2 95 aa7.99□□□□□ -1.13
UPF3AP3-201ENST00000420996 A0A1W2PPM0 123 aa7.98□□□□□ -1.13
UPF3AP3-201ENST00000420996 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
UPF3AP3-201ENST00000420996 DSCR8Q96T75 97 aa7.97□□□□□ -1.13
UPF3AP3-201ENST00000420996 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
UPF3AP3-201ENST00000420996 K7EP34 96 aa7.96□□□□□ -1.14
UPF3AP3-201ENST00000420996 NDUFB1O75438 58 aa7.96□□□□□ -1.14
UPF3AP3-201ENST00000420996 Q6ZQT0 140 aa7.93□□□□□ -1.14
UPF3AP3-201ENST00000420996 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
UPF3AP3-201ENST00000420996 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
UPF3AP3-201ENST00000420996 C9JAW5 83 aa7.91□□□□□ -1.14
UPF3AP3-201ENST00000420996 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
UPF3AP3-201ENST00000420996 F8W1H4 67 aa7.88□□□□□ -1.15
UPF3AP3-201ENST00000420996 IGKV3D-7A0A0C4DH55 119 aa7.87□□□□□ -1.15
UPF3AP3-201ENST00000420996 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
UPF3AP3-201ENST00000420996 K7ERU9 68 aa7.86□□□□□ -1.15
UPF3AP3-201ENST00000420996 Q6ZVQ6 151 aa7.86□□□□□ -1.15
UPF3AP3-201ENST00000420996 J3QR89 54 aa7.85□□□□□ -1.15
UPF3AP3-201ENST00000420996 A0A1B0GW54 56 aa7.82□□□□□ -1.16
UPF3AP3-201ENST00000420996 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
UPF3AP3-201ENST00000420996 NEBP20929 6669 aa7.79□□□□□ -1.16
UPF3AP3-201ENST00000420996 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
UPF3AP3-201ENST00000420996 LOC110117498A0A087WWA1 95 aa7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 TMEM254Q8TBM7 123 aa7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 JMJD7-PLA2G4BH0Y9G9 81 aa7.76□□□□□ -1.17
UPF3AP3-201ENST00000420996 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
UPF3AP3-201ENST00000420996 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
UPF3AP3-201ENST00000420996 PDE6GP18545 87 aa7.73□□□□□ -1.17
UPF3AP3-201ENST00000420996 A6NN06 94 aa7.71□□□□□ -1.18
UPF3AP3-201ENST00000420996 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
UPF3AP3-201ENST00000420996 NREPQ16612 68 aa7.7□□□□□ -1.18
UPF3AP3-201ENST00000420996 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 H3BT86 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 NDUFS5O43920 106 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 ETDBQ3ZM63 59 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
UPF3AP3-201ENST00000420996 MT1BP07438 61 aa7.66□□□□□ -1.18
UPF3AP3-201ENST00000420996 Q5W150 140 aa7.65□□□□□ -1.18
UPF3AP3-201ENST00000420996 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
UPF3AP3-201ENST00000420996 K7EQZ3 153 aa7.63□□□□□ -1.19
UPF3AP3-201ENST00000420996 Q5VV11 94 aa7.63□□□□□ -1.19
UPF3AP3-201ENST00000420996 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
UPF3AP3-201ENST00000420996 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
UPF3AP3-201ENST00000420996 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
UPF3AP3-201ENST00000420996 KRTAP19-8Q3LI54 63 aa7.6□□□□□ -1.19
UPF3AP3-201ENST00000420996 C5orf47Q569G3 176 aa7.6□□□□□ -1.19
UPF3AP3-201ENST00000420996 H3BS24 57 aa7.58□□□□□ -1.2
UPF3AP3-201ENST00000420996 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
UPF3AP3-201ENST00000420996 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
UPF3AP3-201ENST00000420996 ACYP1P07311 99 aa7.54□□□□□ -1.2
UPF3AP3-201ENST00000420996 KRTAP5-9P26371 169 aa7.54□□□□□ -1.2
UPF3AP3-201ENST00000420996 BPY2O14599 106 aa7.52□□□□□ -1.21
UPF3AP3-201ENST00000420996 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
UPF3AP3-201ENST00000420996 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
UPF3AP3-201ENST00000420996 FAM240AA0A1B0GVK7 77 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 Q8N9L7 120 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 S4R3F8 94 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms