RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
TRIM39-206ENST00000420746 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
TRIM39-206ENST00000420746 RAB37Q96AX2 223 aa3.81□□□□□ -1.8
TRIM39-206ENST00000420746 DSCR8Q96T75 97 aa3.81□□□□□ -1.8
TRIM39-206ENST00000420746 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
TRIM39-206ENST00000420746 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
TRIM39-206ENST00000420746 KLKP1Q107X0 134 aa3.79□□□□□ -1.8
TRIM39-206ENST00000420746 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
TRIM39-206ENST00000420746 LINC00472Q9H8W2 130 aa3.79□□□□□ -1.8
TRIM39-206ENST00000420746 HSPB8Q9UJY1 196 aa3.79□□□□□ -1.8
TRIM39-206ENST00000420746 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
TRIM39-206ENST00000420746 UQCC3Q6UW78 93 aa3.77□□□□□ -1.81
TRIM39-206ENST00000420746 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
TRIM39-206ENST00000420746 IGKV3D-7A0A0C4DH55 119 aa3.75□□□□□ -1.81
TRIM39-206ENST00000420746 MT1XP80297 61 aa3.75□□□□□ -1.81
TRIM39-206ENST00000420746 C5orf47Q569G3 176 aa3.75□□□□□ -1.81
TRIM39-206ENST00000420746 C12orf57Q99622 126 aa3.75□□□□□ -1.81
TRIM39-206ENST00000420746 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 TMEM218A2RU14 115 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 SVBPQ8N300 66 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
TRIM39-206ENST00000420746 TRGC2P03986 189 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 BVES-AS1Q5T3Y7 98 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 SCGB1D4Q6XE38 83 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 PRR15Q8IV56 129 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
TRIM39-206ENST00000420746 H3BMG7 143 aa3.72□□□□□ -1.81
TRIM39-206ENST00000420746 SNAPINO95295 136 aa3.72□□□□□ -1.81
TRIM39-206ENST00000420746 APOC3P02656 99 aa3.72□□□□□ -1.81
TRIM39-206ENST00000420746 SMIM6P0DI80 62 aa3.72□□□□□ -1.81
TRIM39-206ENST00000420746 S100A6P06703 90 aa3.71□□□□□ -1.82
TRIM39-206ENST00000420746 PCP4L1A6NKN8 68 aa3.7□□□□□ -1.82
TRIM39-206ENST00000420746 FABP4P15090 132 aa3.7□□□□□ -1.82
TRIM39-206ENST00000420746 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
TRIM39-206ENST00000420746 SNCGO76070 127 aa3.67□□□□□ -1.82
TRIM39-206ENST00000420746 LCA10Q71F78 164 aa3.66□□□□□ -1.82
TRIM39-206ENST00000420746 J3KT08 172 aa3.65□□□□□ -1.83
TRIM39-206ENST00000420746 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
TRIM39-206ENST00000420746 SYS1-DBNDD2H3BUS1 97 aa3.64□□□□□ -1.83
TRIM39-206ENST00000420746 LINC01545Q5VT33 79 aa3.64□□□□□ -1.83
TRIM39-206ENST00000420746 C2orf91Q6ZV80 131 aa3.64□□□□□ -1.83
TRIM39-206ENST00000420746 S4R3F8 94 aa3.64□□□□□ -1.83
TRIM39-206ENST00000420746 TRACP01848 142 aa3.63□□□□□ -1.83
TRIM39-206ENST00000420746 S100A2P29034 98 aa3.63□□□□□ -1.83
TRIM39-206ENST00000420746 MT4P47944 62 aa3.63□□□□□ -1.83
TRIM39-206ENST00000420746 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
TRIM39-206ENST00000420746 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
TRIM39-206ENST00000420746 NDUFB1O75438 58 aa3.62□□□□□ -1.83
TRIM39-206ENST00000420746 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
TRIM39-206ENST00000420746 C8orf17Q9NRJ1 99 aa3.62□□□□□ -1.83
TRIM39-206ENST00000420746 TSTD3H0UI37 97 aa3.61□□□□□ -1.83
TRIM39-206ENST00000420746 FABP2P12104 132 aa3.61□□□□□ -1.83
TRIM39-206ENST00000420746 CCKP06307 115 aa3.6□□□□□ -1.83
TRIM39-206ENST00000420746 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
TRIM39-206ENST00000420746 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
TRIM39-206ENST00000420746 Q6ZVQ6 151 aa3.6□□□□□ -1.83
TRIM39-206ENST00000420746 YPEL4Q96NS1 127 aa3.6□□□□□ -1.83
TRIM39-206ENST00000420746 IGKV2D-30A0A075B6S6 120 aa3.59□□□□□ -1.83
TRIM39-206ENST00000420746 IGKV2-30P06310 120 aa3.59□□□□□ -1.83
TRIM39-206ENST00000420746 PET117Q6UWS5 81 aa3.59□□□□□ -1.83
TRIM39-206ENST00000420746 A0A1B0GX51 115 aa3.58□□□□□ -1.84
TRIM39-206ENST00000420746 H0YGX0 51 aa3.58□□□□□ -1.84
TRIM39-206ENST00000420746 K7EQZ3 153 aa3.58□□□□□ -1.84
TRIM39-206ENST00000420746 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
TRIM39-206ENST00000420746 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
TRIM39-206ENST00000420746 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
TRIM39-206ENST00000420746 PCP4P48539 62 aa3.55□□□□□ -1.84
TRIM39-206ENST00000420746 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
TRIM39-206ENST00000420746 PYY3Q5JQD4 70 aa3.55□□□□□ -1.84
TRIM39-206ENST00000420746 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
TRIM39-206ENST00000420746 C14orf144Q96I85 54 aa3.54□□□□□ -1.84
TRIM39-206ENST00000420746 H3BQ85 93 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BKO60814 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BJP06899 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BOP23527 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BBP33778 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BDP58876 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BCP62807 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST2H2BEQ16778 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 COA6Q5JTJ3 125 aaKnown RBP3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.53□□□□□ -1.84
TRIM39-206ENST00000420746 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BHQ93079 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BNQ99877 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 HIST1H2BMQ99879 126 aa3.53□□□□□ -1.84
TRIM39-206ENST00000420746 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
TRIM39-206ENST00000420746 A0A1B0GV90 55 aa3.52□□□□□ -1.85
TRIM39-206ENST00000420746 A8MUN3 132 aa3.52□□□□□ -1.85
TRIM39-206ENST00000420746 M0R143 59 aa3.51□□□□□ -1.85
TRIM39-206ENST00000420746 HIST1H2BLQ99880 126 aa3.51□□□□□ -1.85
TRIM39-206ENST00000420746 A0A1B0GV72 72 aa3.5□□□□□ -1.85
TRIM39-206ENST00000420746 PDE6GP18545 87 aa3.49□□□□□ -1.85
TRIM39-206ENST00000420746 Q5W150 140 aa3.48□□□□□ -1.85
TRIM39-206ENST00000420746 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
TRIM39-206ENST00000420746 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
TRIM39-206ENST00000420746 VPS25Q9BRG1 176 aa3.48□□□□□ -1.85
TRIM39-206ENST00000420746 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms