RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
EPHA4-205ENST00000419964 NDUFC1O43677 76 aa4.31□□□□□ -1.72
EPHA4-205ENST00000419964 DSCR10P59022 87 aa4.31□□□□□ -1.72
EPHA4-205ENST00000419964 MOBPQ13875 183 aa4.31□□□□□ -1.72
EPHA4-205ENST00000419964 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
EPHA4-205ENST00000419964 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
EPHA4-205ENST00000419964 A8MWP4 228 aa4.3□□□□□ -1.72
EPHA4-205ENST00000419964 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
EPHA4-205ENST00000419964 TGP01266 2768 aa4.29□□□□□ -1.72
EPHA4-205ENST00000419964 K7EQZ3 153 aa4.29□□□□□ -1.72
EPHA4-205ENST00000419964 TMEM258P61165 79 aa4.29□□□□□ -1.72
EPHA4-205ENST00000419964 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
EPHA4-205ENST00000419964 Q8N9L7 120 aa4.29□□□□□ -1.72
EPHA4-205ENST00000419964 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
EPHA4-205ENST00000419964 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
EPHA4-205ENST00000419964 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
EPHA4-205ENST00000419964 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
EPHA4-205ENST00000419964 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
EPHA4-205ENST00000419964 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
EPHA4-205ENST00000419964 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
EPHA4-205ENST00000419964 A0A0G2JQZ4 141 aa4.26□□□□□ -1.73
EPHA4-205ENST00000419964 Q5XG85 94 aa4.26□□□□□ -1.73
EPHA4-205ENST00000419964 CASC2Q6XLA1 102 aa4.26□□□□□ -1.73
EPHA4-205ENST00000419964 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
EPHA4-205ENST00000419964 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
EPHA4-205ENST00000419964 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
EPHA4-205ENST00000419964 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
EPHA4-205ENST00000419964 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
EPHA4-205ENST00000419964 H3BPC8 53 aa4.24□□□□□ -1.73
EPHA4-205ENST00000419964 MP68P56378 58 aa4.24□□□□□ -1.73
EPHA4-205ENST00000419964 HRCT1Q6UXD1 115 aa4.24□□□□□ -1.73
EPHA4-205ENST00000419964 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
EPHA4-205ENST00000419964 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 Q96NJ1 140 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 ANAPC11Q9NYG5 84 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 PKD1P98161 4303 aa4.23□□□□□ -1.73
EPHA4-205ENST00000419964 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
EPHA4-205ENST00000419964 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
EPHA4-205ENST00000419964 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
EPHA4-205ENST00000419964 SPINK1P00995 79 aa4.22□□□□□ -1.73
EPHA4-205ENST00000419964 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
EPHA4-205ENST00000419964 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
EPHA4-205ENST00000419964 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
EPHA4-205ENST00000419964 TYMSOSQ8TAI1 123 aa4.21□□□□□ -1.74
EPHA4-205ENST00000419964 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
EPHA4-205ENST00000419964 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
EPHA4-205ENST00000419964 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
EPHA4-205ENST00000419964 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
EPHA4-205ENST00000419964 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 FAM236DA0A1B0GTK5 79 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 H7BZZ5 65 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 FAM236CP0DP71 79 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
EPHA4-205ENST00000419964 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
EPHA4-205ENST00000419964 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
EPHA4-205ENST00000419964 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
EPHA4-205ENST00000419964 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
EPHA4-205ENST00000419964 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
EPHA4-205ENST00000419964 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
EPHA4-205ENST00000419964 H0Y9P7 68 aa4.15□□□□□ -1.75
EPHA4-205ENST00000419964 LINC00304Q8N9R0 145 aa4.15□□□□□ -1.75
EPHA4-205ENST00000419964 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
EPHA4-205ENST00000419964 NDUFS5O43920 106 aa4.14□□□□□ -1.75
EPHA4-205ENST00000419964 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-205ENST00000419964 LINC00313P59037 77 aa4.14□□□□□ -1.75
EPHA4-205ENST00000419964 C1orf195Q5TG92 126 aa4.14□□□□□ -1.75
EPHA4-205ENST00000419964 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
EPHA4-205ENST00000419964 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
EPHA4-205ENST00000419964 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
EPHA4-205ENST00000419964 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
EPHA4-205ENST00000419964 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
EPHA4-205ENST00000419964 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
EPHA4-205ENST00000419964 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
EPHA4-205ENST00000419964 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
EPHA4-205ENST00000419964 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
EPHA4-205ENST00000419964 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
EPHA4-205ENST00000419964 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
EPHA4-205ENST00000419964 RYR2Q92736 4967 aa4.08□□□□□ -1.76
EPHA4-205ENST00000419964 VPS13BQ7Z7G8 4022 aa4.06□□□□□ -1.76
EPHA4-205ENST00000419964 PKHD1P08F94 4074 aa4.06□□□□□ -1.76
EPHA4-205ENST00000419964 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
EPHA4-205ENST00000419964 Q5VSD8 79 aa4.06□□□□□ -1.76
EPHA4-205ENST00000419964 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
EPHA4-205ENST00000419964 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
EPHA4-205ENST00000419964 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
EPHA4-205ENST00000419964 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
EPHA4-205ENST00000419964 KRTAP10-8P60410 259 aa4□□□□□ -1.77
EPHA4-205ENST00000419964 V9GYY9 64 aa4□□□□□ -1.77
EPHA4-205ENST00000419964 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
EPHA4-205ENST00000419964 PCOTHQ58A44 107 aa3.99□□□□□ -1.77
EPHA4-205ENST00000419964 Q5W150 140 aa3.99□□□□□ -1.77
EPHA4-205ENST00000419964 OXTP01178 125 aa3.98□□□□□ -1.77
EPHA4-205ENST00000419964 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
EPHA4-205ENST00000419964 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
EPHA4-205ENST00000419964 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms