RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 LCE6AA0A183 80 aa4.91□□□□□ -1.62
COL12A1-204ENST00000419671 ZNF861PO60384 105 aa4.91□□□□□ -1.62
COL12A1-204ENST00000419671 NREPQ16612 68 aa4.91□□□□□ -1.62
COL12A1-204ENST00000419671 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
COL12A1-204ENST00000419671 IGLV7-43P04211 117 aa4.9□□□□□ -1.62
COL12A1-204ENST00000419671 Q5VV11 94 aa4.9□□□□□ -1.62
COL12A1-204ENST00000419671 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.62
COL12A1-204ENST00000419671 HCG22E2RYF7 251 aa4.89□□□□□ -1.63
COL12A1-204ENST00000419671 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
COL12A1-204ENST00000419671 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
COL12A1-204ENST00000419671 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
COL12A1-204ENST00000419671 BPY2O14599 106 aa4.88□□□□□ -1.63
COL12A1-204ENST00000419671 Q8N9L7 120 aa4.88□□□□□ -1.63
COL12A1-204ENST00000419671 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
COL12A1-204ENST00000419671 A0A087WSZ3 146 aa4.87□□□□□ -1.63
COL12A1-204ENST00000419671 IGLV9-49A0A0B4J1Y8 123 aa4.87□□□□□ -1.63
COL12A1-204ENST00000419671 IGKV4-1P06312 121 aa4.87□□□□□ -1.63
COL12A1-204ENST00000419671 ANAPC11Q9NYG5 84 aa4.87□□□□□ -1.63
COL12A1-204ENST00000419671 Q75L30 129 aa4.87□□□□□ -1.63
COL12A1-204ENST00000419671 RYR2Q92736 4967 aa4.86□□□□□ -1.63
COL12A1-204ENST00000419671 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
COL12A1-204ENST00000419671 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
COL12A1-204ENST00000419671 DSCR10P59022 87 aa4.85□□□□□ -1.63
COL12A1-204ENST00000419671 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
COL12A1-204ENST00000419671 A0A1B0GVY2 172 aa4.84□□□□□ -1.63
COL12A1-204ENST00000419671 MOBPQ13875 183 aa4.84□□□□□ -1.63
COL12A1-204ENST00000419671 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.64
COL12A1-204ENST00000419671 RPL37AP61513 92 aaKnown RBP4.84□□□□□ -1.64
COL12A1-204ENST00000419671 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.64
COL12A1-204ENST00000419671 K7EQZ3 153 aa4.83□□□□□ -1.64
COL12A1-204ENST00000419671 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
COL12A1-204ENST00000419671 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
COL12A1-204ENST00000419671 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
COL12A1-204ENST00000419671 LINC00472Q9H8W2 130 aa4.82□□□□□ -1.64
COL12A1-204ENST00000419671 LIMD2Q9BT23 127 aa4.8□□□□□ -1.64
COL12A1-204ENST00000419671 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
COL12A1-204ENST00000419671 A0A087X002 238 aa4.79□□□□□ -1.64
COL12A1-204ENST00000419671 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
COL12A1-204ENST00000419671 Q96NJ1 140 aa4.79□□□□□ -1.64
COL12A1-204ENST00000419671 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
COL12A1-204ENST00000419671 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
COL12A1-204ENST00000419671 KRTAP13-2Q52LG2 175 aa4.77□□□□□ -1.65
COL12A1-204ENST00000419671 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
COL12A1-204ENST00000419671 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
COL12A1-204ENST00000419671 A8MWP4 228 aa4.76□□□□□ -1.65
COL12A1-204ENST00000419671 OCR1Q9BZK8 76 aa4.76□□□□□ -1.65
COL12A1-204ENST00000419671 RYR3Q15413 4870 aa4.76□□□□□ -1.65
COL12A1-204ENST00000419671 SSBP3-AS1Q7Z2R9 100 aa4.76□□□□□ -1.65
COL12A1-204ENST00000419671 A6NED7 52 aa4.75□□□□□ -1.65
COL12A1-204ENST00000419671 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
COL12A1-204ENST00000419671 SMR3BP02814 79 aaPredicted RBP4.74□□□□□ -1.65
COL12A1-204ENST00000419671 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
COL12A1-204ENST00000419671 RETNLBQ9BQ08 111 aa4.74□□□□□ -1.65
COL12A1-204ENST00000419671 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
COL12A1-204ENST00000419671 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
COL12A1-204ENST00000419671 WFDC13Q8IUB5 93 aa4.72□□□□□ -1.65
COL12A1-204ENST00000419671 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
COL12A1-204ENST00000419671 FAT1Q14517 4588 aa4.72□□□□□ -1.65
COL12A1-204ENST00000419671 SPINK6Q6UWN8 80 aa4.72□□□□□ -1.65
COL12A1-204ENST00000419671 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
COL12A1-204ENST00000419671 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
COL12A1-204ENST00000419671 CASC2Q6XLA1 102 aa4.7□□□□□ -1.66
COL12A1-204ENST00000419671 NDUFB1O75438 58 aa4.7□□□□□ -1.66
COL12A1-204ENST00000419671 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
COL12A1-204ENST00000419671 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
COL12A1-204ENST00000419671 TYMSOSQ8TAI1 123 aa4.67□□□□□ -1.66
COL12A1-204ENST00000419671 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
COL12A1-204ENST00000419671 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
COL12A1-204ENST00000419671 HSPG2P98160 4391 aa4.65□□□□□ -1.67
COL12A1-204ENST00000419671 CDK2AP2O75956 126 aa4.65□□□□□ -1.67
COL12A1-204ENST00000419671 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
COL12A1-204ENST00000419671 SPINK1P00995 79 aa4.63□□□□□ -1.67
COL12A1-204ENST00000419671 ROMO1P60602 79 aa4.62□□□□□ -1.67
COL12A1-204ENST00000419671 LINC00304Q8N9R0 145 aa4.61□□□□□ -1.67
COL12A1-204ENST00000419671 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
COL12A1-204ENST00000419671 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
COL12A1-204ENST00000419671 LINC00208Q96KT6 92 aa4.6□□□□□ -1.67
COL12A1-204ENST00000419671 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
COL12A1-204ENST00000419671 H0Y9P7 68 aa4.59□□□□□ -1.67
COL12A1-204ENST00000419671 RPS29P62273 56 aaKnown RBP4.59□□□□□ -1.67
COL12A1-204ENST00000419671 Q5VSD8 79 aa4.58□□□□□ -1.68
COL12A1-204ENST00000419671 SPAG11AQ6PDA7 123 aa4.58□□□□□ -1.68
COL12A1-204ENST00000419671 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
COL12A1-204ENST00000419671 RYR1P21817 5038 aa4.58□□□□□ -1.68
COL12A1-204ENST00000419671 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
COL12A1-204ENST00000419671 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
COL12A1-204ENST00000419671 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
COL12A1-204ENST00000419671 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
COL12A1-204ENST00000419671 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
COL12A1-204ENST00000419671 SPANXA2-OT1Q8N9U9 137 aa4.56□□□□□ -1.68
COL12A1-204ENST00000419671 H3BPC8 53 aa4.56□□□□□ -1.68
COL12A1-204ENST00000419671 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
COL12A1-204ENST00000419671 SPINK7P58062 85 aa4.55□□□□□ -1.68
COL12A1-204ENST00000419671 PRR4Q16378 134 aa4.55□□□□□ -1.68
COL12A1-204ENST00000419671 Q5W150 140 aa4.54□□□□□ -1.68
COL12A1-204ENST00000419671 TNXBP22105 4242 aa4.54□□□□□ -1.68
COL12A1-204ENST00000419671 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
COL12A1-204ENST00000419671 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
COL12A1-204ENST00000419671 Q8N1X5 172 aa4.52□□□□□ -1.69
COL12A1-204ENST00000419671 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms