RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 A0A1B0GX51 115 aa3.74□□□□□ -1.81
HMGN1-205ENST00000419378 PSMB2P49721 201 aa3.73□□□□□ -1.81
HMGN1-205ENST00000419378 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
HMGN1-205ENST00000419378 DNAL4O96015 105 aa3.72□□□□□ -1.81
HMGN1-205ENST00000419378 FABP2P12104 132 aa3.72□□□□□ -1.81
HMGN1-205ENST00000419378 Q6Q795 121 aa3.72□□□□□ -1.81
HMGN1-205ENST00000419378 H3BMG7 143 aa3.71□□□□□ -1.82
HMGN1-205ENST00000419378 COX6CP09669 75 aa3.71□□□□□ -1.82
HMGN1-205ENST00000419378 ORMDL1Q9P0S3 153 aa3.71□□□□□ -1.82
HMGN1-205ENST00000419378 LST1O00453 97 aa3.7□□□□□ -1.82
HMGN1-205ENST00000419378 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
HMGN1-205ENST00000419378 TEN1Q86WV5 123 aa3.7□□□□□ -1.82
HMGN1-205ENST00000419378 SS18L2Q9UHA2 77 aa3.7□□□□□ -1.82
HMGN1-205ENST00000419378 A0A087WSZ3 146 aa3.69□□□□□ -1.82
HMGN1-205ENST00000419378 A0A1B0GV72 72 aa3.69□□□□□ -1.82
HMGN1-205ENST00000419378 H3BQ85 93 aa3.69□□□□□ -1.82
HMGN1-205ENST00000419378 SMIM6P0DI80 62 aa3.69□□□□□ -1.82
HMGN1-205ENST00000419378 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
HMGN1-205ENST00000419378 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
HMGN1-205ENST00000419378 M0R143 59 aa3.67□□□□□ -1.82
HMGN1-205ENST00000419378 TRACP01848 142 aa3.67□□□□□ -1.82
HMGN1-205ENST00000419378 ANKRD29Q8N6D5 301 aa3.67□□□□□ -1.82
HMGN1-205ENST00000419378 OBSCN-AS1Q96MR7 158 aa3.67□□□□□ -1.82
HMGN1-205ENST00000419378 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
HMGN1-205ENST00000419378 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
HMGN1-205ENST00000419378 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
HMGN1-205ENST00000419378 Q96NJ1 140 aa3.66□□□□□ -1.82
HMGN1-205ENST00000419378 TRBV7-4A0A0J9YYF1 115 aa3.65□□□□□ -1.83
HMGN1-205ENST00000419378 CCKP06307 115 aa3.64□□□□□ -1.83
HMGN1-205ENST00000419378 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
HMGN1-205ENST00000419378 NAA38Q9BRA0 125 aaKnown RBP3.63□□□□□ -1.83
HMGN1-205ENST00000419378 TSTD3H0UI37 97 aa3.62□□□□□ -1.83
HMGN1-205ENST00000419378 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
HMGN1-205ENST00000419378 RBM3P98179 157 aaKnown RBP3.62□□□□□ -1.83
HMGN1-205ENST00000419378 ATXN8Q156A1 80 aa3.62□□□□□ -1.83
HMGN1-205ENST00000419378 ATP11AUNQ6ZP68 121 aa3.62□□□□□ -1.83
HMGN1-205ENST00000419378 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
HMGN1-205ENST00000419378 LOC105371267A0A1B0GV96 52 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 A8MUU9 505 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 BAALC-AS2P0C853 105 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 MT1HP80294 61 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 DSCR8Q96T75 97 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 LINC00472Q9H8W2 130 aa3.61□□□□□ -1.83
HMGN1-205ENST00000419378 BATFQ16520 125 aa3.6□□□□□ -1.83
HMGN1-205ENST00000419378 DEFB116Q30KQ4 102 aa3.6□□□□□ -1.83
HMGN1-205ENST00000419378 C9JAW5 83 aa3.59□□□□□ -1.83
HMGN1-205ENST00000419378 LINC00313P59037 77 aa3.59□□□□□ -1.83
HMGN1-205ENST00000419378 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
HMGN1-205ENST00000419378 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
HMGN1-205ENST00000419378 JMJD7-PLA2G4BH0Y9G9 81 aa3.58□□□□□ -1.84
HMGN1-205ENST00000419378 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
HMGN1-205ENST00000419378 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
HMGN1-205ENST00000419378 LOC110117498A0A087WWA1 95 aa3.57□□□□□ -1.84
HMGN1-205ENST00000419378 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
HMGN1-205ENST00000419378 Q6ZQT0 140 aa3.57□□□□□ -1.84
HMGN1-205ENST00000419378 A0A1B0GVX0 72 aa3.56□□□□□ -1.84
HMGN1-205ENST00000419378 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
HMGN1-205ENST00000419378 J3KT08 172 aa3.55□□□□□ -1.84
HMGN1-205ENST00000419378 TAX1BP3O14907 124 aa3.55□□□□□ -1.84
HMGN1-205ENST00000419378 C14orf132Q9NPU4 83 aa3.55□□□□□ -1.84
HMGN1-205ENST00000419378 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
HMGN1-205ENST00000419378 A0A1B0GW54 56 aa3.54□□□□□ -1.84
HMGN1-205ENST00000419378 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
HMGN1-205ENST00000419378 PDE6GP18545 87 aa3.54□□□□□ -1.84
HMGN1-205ENST00000419378 M0R2T5 61 aa3.53□□□□□ -1.84
HMGN1-205ENST00000419378 H3BT86 120 aa3.52□□□□□ -1.85
HMGN1-205ENST00000419378 A8MWP4 228 aa3.51□□□□□ -1.85
HMGN1-205ENST00000419378 NDUFB1O75438 58 aa3.51□□□□□ -1.85
HMGN1-205ENST00000419378 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
HMGN1-205ENST00000419378 A8MU10 97 aa3.49□□□□□ -1.85
HMGN1-205ENST00000419378 HRES1P13985 223 aa3.49□□□□□ -1.85
HMGN1-205ENST00000419378 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
HMGN1-205ENST00000419378 C8orf17Q9NRJ1 99 aa3.49□□□□□ -1.85
HMGN1-205ENST00000419378 SPCS1Q9Y6A9 102 aa3.49□□□□□ -1.85
HMGN1-205ENST00000419378 NREPQ16612 68 aa3.48□□□□□ -1.85
HMGN1-205ENST00000419378 COL5A1-AS1Q5SY13 56 aa3.48□□□□□ -1.85
HMGN1-205ENST00000419378 PRR15Q8IV56 129 aa3.47□□□□□ -1.85
HMGN1-205ENST00000419378 MMP24-AS1A0A0U1RRL7 71 aa3.46□□□□□ -1.86
HMGN1-205ENST00000419378 FAM236DA0A1B0GTK5 79 aa3.46□□□□□ -1.86
HMGN1-205ENST00000419378 K7EQZ3 153 aa3.46□□□□□ -1.86
HMGN1-205ENST00000419378 FAM236CP0DP71 79 aa3.46□□□□□ -1.86
HMGN1-205ENST00000419378 RBM12B-AS1Q9P1G2 102 aa3.46□□□□□ -1.86
HMGN1-205ENST00000419378 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
HMGN1-205ENST00000419378 K7EP34 96 aa3.44□□□□□ -1.86
HMGN1-205ENST00000419378 BPY2O14599 106 aa3.44□□□□□ -1.86
HMGN1-205ENST00000419378 SPINK7P58062 85 aa3.44□□□□□ -1.86
HMGN1-205ENST00000419378 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
HMGN1-205ENST00000419378 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
HMGN1-205ENST00000419378 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
HMGN1-205ENST00000419378 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
HMGN1-205ENST00000419378 Q8N9L7 120 aa3.41□□□□□ -1.86
HMGN1-205ENST00000419378 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
HMGN1-205ENST00000419378 NDUFS5O43920 106 aa3.4□□□□□ -1.87
HMGN1-205ENST00000419378 SEC61GP60059 68 aa3.4□□□□□ -1.87
HMGN1-205ENST00000419378 WFDC13Q8IUB5 93 aa3.4□□□□□ -1.87
HMGN1-205ENST00000419378 LINC00846Q9NV44 126 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms