RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 MXRA5Q9NR99 2828 aa5.91□□□□□ -1.46
LINC00963-202ENST00000419300 FBN2P35556 2912 aa5.9□□□□□ -1.46
LINC00963-202ENST00000419300 BOD1L1Q8NFC6 3051 aa5.9□□□□□ -1.46
LINC00963-202ENST00000419300 TGP01266 2768 aa5.89□□□□□ -1.47
LINC00963-202ENST00000419300 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
LINC00963-202ENST00000419300 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
LINC00963-202ENST00000419300 FREM2Q5SZK8 3169 aa5.88□□□□□ -1.47
LINC00963-202ENST00000419300 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
LINC00963-202ENST00000419300 M0QZ58 72 aa5.87□□□□□ -1.47
LINC00963-202ENST00000419300 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
LINC00963-202ENST00000419300 CELSR3Q9NYQ7 3312 aa5.87□□□□□ -1.47
LINC00963-202ENST00000419300 M0R2T5 61 aa5.87□□□□□ -1.47
LINC00963-202ENST00000419300 COL6A3P12111 3177 aa5.85□□□□□ -1.47
LINC00963-202ENST00000419300 VWFP04275 2813 aa5.84□□□□□ -1.47
LINC00963-202ENST00000419300 ADGRG4Q8IZF6 3080 aa5.82□□□□□ -1.48
LINC00963-202ENST00000419300 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
LINC00963-202ENST00000419300 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
LINC00963-202ENST00000419300 DMXL1Q9Y485 3027 aa5.8□□□□□ -1.48
LINC00963-202ENST00000419300 ATMQ13315 3056 aa5.8□□□□□ -1.48
LINC00963-202ENST00000419300 VCANP13611 3396 aa5.77□□□□□ -1.49
LINC00963-202ENST00000419300 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
LINC00963-202ENST00000419300 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
LINC00963-202ENST00000419300 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
LINC00963-202ENST00000419300 UNC80Q8N2C7 3258 aa5.75□□□□□ -1.49
LINC00963-202ENST00000419300 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
LINC00963-202ENST00000419300 Q5VSD8 79 aa5.72□□□□□ -1.49
LINC00963-202ENST00000419300 PP632Q6XCG6 107 aa5.71□□□□□ -1.49
LINC00963-202ENST00000419300 SZT2Q5T011 3432 aa5.71□□□□□ -1.5
LINC00963-202ENST00000419300 KRTAP10-1P60331 282 aa5.69□□□□□ -1.5
LINC00963-202ENST00000419300 EYSQ5T1H1 3165 aa5.68□□□□□ -1.5
LINC00963-202ENST00000419300 ZFHX3Q15911 3703 aa5.66□□□□□ -1.5
LINC00963-202ENST00000419300 Q6ZRN7 208 aaPredicted RBP5.66□□□□□ -1.5
LINC00963-202ENST00000419300 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
LINC00963-202ENST00000419300 KRTAP10-2P60368 255 aa5.65□□□□□ -1.51
LINC00963-202ENST00000419300 CELSR1Q9NYQ6 3014 aa5.65□□□□□ -1.51
LINC00963-202ENST00000419300 A8MUU9 505 aa5.64□□□□□ -1.51
LINC00963-202ENST00000419300 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
LINC00963-202ENST00000419300 TENM2Q9NT68 2774 aa5.62□□□□□ -1.51
LINC00963-202ENST00000419300 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
LINC00963-202ENST00000419300 SPENQ96T58 3664 aaKnown RBP5.61□□□□□ -1.51
LINC00963-202ENST00000419300 CFAP47Q6ZTR5 3102 aa5.61□□□□□ -1.51
LINC00963-202ENST00000419300 A8MU10 97 aa5.58□□□□□ -1.52
LINC00963-202ENST00000419300 TNP1P09430 55 aa5.57□□□□□ -1.52
LINC00963-202ENST00000419300 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
LINC00963-202ENST00000419300 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
LINC00963-202ENST00000419300 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
LINC00963-202ENST00000419300 SPEGQ15772 3267 aa5.54□□□□□ -1.52
LINC00963-202ENST00000419300 MYO15AQ9UKN7 3530 aa5.52□□□□□ -1.53
LINC00963-202ENST00000419300 COL7A1Q02388 2944 aa5.5□□□□□ -1.53
LINC00963-202ENST00000419300 AKAP9Q99996 3911 aa5.5□□□□□ -1.53
LINC00963-202ENST00000419300 H0YAA0 97 aa5.5□□□□□ -1.53
LINC00963-202ENST00000419300 KRTAP21-3Q3LHN1 58 aa5.49□□□□□ -1.53
LINC00963-202ENST00000419300 DMDP11532 3685 aa5.49□□□□□ -1.53
LINC00963-202ENST00000419300 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.54
LINC00963-202ENST00000419300 LAMA5O15230 3695 aa5.45□□□□□ -1.54
LINC00963-202ENST00000419300 VPS13CQ709C8 3753 aa5.43□□□□□ -1.54
LINC00963-202ENST00000419300 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
LINC00963-202ENST00000419300 P0C880 135 aa5.41□□□□□ -1.54
LINC00963-202ENST00000419300 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
LINC00963-202ENST00000419300 LOC400499M0QZD8 3231 aa5.4□□□□□ -1.55
LINC00963-202ENST00000419300 ASPMQ8IZT6 3477 aa5.36□□□□□ -1.55
LINC00963-202ENST00000419300 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
LINC00963-202ENST00000419300 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
LINC00963-202ENST00000419300 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
LINC00963-202ENST00000419300 KRTAP13-3Q3SY46 172 aa5.29□□□□□ -1.56
LINC00963-202ENST00000419300 XP32Q5T750 250 aa5.28□□□□□ -1.56
LINC00963-202ENST00000419300 MEGF8Q7Z7M0 2845 aa5.27□□□□□ -1.57
LINC00963-202ENST00000419300 RELNP78509 3460 aa5.25□□□□□ -1.57
LINC00963-202ENST00000419300 CSMD1Q96PZ7 3565 aa5.23□□□□□ -1.57
LINC00963-202ENST00000419300 DCHS1Q96JQ0 3298 aa5.23□□□□□ -1.57
LINC00963-202ENST00000419300 FBN3Q75N90 2809 aa5.18□□□□□ -1.58
LINC00963-202ENST00000419300 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
LINC00963-202ENST00000419300 BSNQ9UPA5 3926 aa5.15□□□□□ -1.59
LINC00963-202ENST00000419300 OTOGQ6ZRI0 2925 aa5.12□□□□□ -1.59
LINC00963-202ENST00000419300 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
LINC00963-202ENST00000419300 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
LINC00963-202ENST00000419300 ALMS1Q8TCU4 4167 aa5.06□□□□□ -1.6
LINC00963-202ENST00000419300 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
LINC00963-202ENST00000419300 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
LINC00963-202ENST00000419300 CMYA5Q8N3K9 4069 aa4.98□□□□□ -1.61
LINC00963-202ENST00000419300 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
LINC00963-202ENST00000419300 INE1O15225 51 aa4.93□□□□□ -1.62
LINC00963-202ENST00000419300 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
LINC00963-202ENST00000419300 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
LINC00963-202ENST00000419300 LYSTQ99698 3801 aa4.88□□□□□ -1.63
LINC00963-202ENST00000419300 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
LINC00963-202ENST00000419300 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.63
LINC00963-202ENST00000419300 A0A1B0GVY2 172 aa4.84□□□□□ -1.64
LINC00963-202ENST00000419300 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
LINC00963-202ENST00000419300 MUC3AQ02505 3323 aa4.82□□□□□ -1.64
LINC00963-202ENST00000419300 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
LINC00963-202ENST00000419300 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
LINC00963-202ENST00000419300 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
LINC00963-202ENST00000419300 CSMD3Q7Z407 3707 aa4.79□□□□□ -1.64
LINC00963-202ENST00000419300 ZNF469Q96JG9 3925 aaPredicted RBP4.77□□□□□ -1.65
LINC00963-202ENST00000419300 CUBNO60494 3623 aa4.75□□□□□ -1.65
LINC00963-202ENST00000419300 CSMD2Q7Z408 3487 aa4.74□□□□□ -1.65
LINC00963-202ENST00000419300 ANK2Q01484 3957 aa4.65□□□□□ -1.67
LINC00963-202ENST00000419300 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
LINC00963-202ENST00000419300 KRTAP3-3Q9BYR6 98 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms