RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
SEMA3B-203ENST00000419007 A6NED7 52 aa9.08□□□□□ -0.96
SEMA3B-203ENST00000419007 RTL8CO15255 209 aa9.07□□□□□ -0.96
SEMA3B-203ENST00000419007 LINC00483Q53H64 154 aa9.07□□□□□ -0.96
SEMA3B-203ENST00000419007 MRPL34Q9BQ48 92 aaKnown RBP9.07□□□□□ -0.96
SEMA3B-203ENST00000419007 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
SEMA3B-203ENST00000419007 IGLV5-52A0A0A0MRZ9 124 aa9.06□□□□□ -0.96
SEMA3B-203ENST00000419007 ASB16-AS1Q495Z4 193 aa9.06□□□□□ -0.96
SEMA3B-203ENST00000419007 Q6ZR54 194 aa9.04□□□□□ -0.96
SEMA3B-203ENST00000419007 ZNF861PO60384 105 aa9.04□□□□□ -0.96
SEMA3B-203ENST00000419007 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
SEMA3B-203ENST00000419007 FRAS1Q86XX4 4008 aa9.02□□□□□ -0.97
SEMA3B-203ENST00000419007 STARD9Q9P2P6 4700 aa9□□□□□ -0.97
SEMA3B-203ENST00000419007 HRES1P13985 223 aa8.99□□□□□ -0.97
SEMA3B-203ENST00000419007 Q75L30 129 aa8.98□□□□□ -0.97
SEMA3B-203ENST00000419007 LCA10Q71F78 164 aa8.98□□□□□ -0.97
SEMA3B-203ENST00000419007 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
SEMA3B-203ENST00000419007 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
SEMA3B-203ENST00000419007 Q5W150 140 aa8.96□□□□□ -0.98
SEMA3B-203ENST00000419007 PLAC8Q9NZF1 115 aa8.96□□□□□ -0.98
SEMA3B-203ENST00000419007 DYNC2H1Q8NCM8 4307 aaKnown RBP8.96□□□□□ -0.98
SEMA3B-203ENST00000419007 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
SEMA3B-203ENST00000419007 HECTD4Q9Y4D8 3996 aa8.93□□□□□ -0.98
SEMA3B-203ENST00000419007 RETNLBQ9BQ08 111 aa8.93□□□□□ -0.98
SEMA3B-203ENST00000419007 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
SEMA3B-203ENST00000419007 LINC01558Q9Y6Z2 57 aa8.92□□□□□ -0.98
SEMA3B-203ENST00000419007 LY6G6CO95867 125 aa8.91□□□□□ -0.98
SEMA3B-203ENST00000419007 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
SEMA3B-203ENST00000419007 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
SEMA3B-203ENST00000419007 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
SEMA3B-203ENST00000419007 SPINK7P58062 85 aa8.88□□□□□ -0.99
SEMA3B-203ENST00000419007 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
SEMA3B-203ENST00000419007 VPS13DQ5THJ4 4388 aa8.87□□□□□ -0.99
SEMA3B-203ENST00000419007 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
SEMA3B-203ENST00000419007 DNAH2Q9P225 4427 aa8.83□□□□□ -1
SEMA3B-203ENST00000419007 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
SEMA3B-203ENST00000419007 LINC00313P59037 77 aa8.82□□□□□ -1
SEMA3B-203ENST00000419007 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
SEMA3B-203ENST00000419007 ACYP2P14621 99 aa8.81□□□□□ -1
SEMA3B-203ENST00000419007 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
SEMA3B-203ENST00000419007 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
SEMA3B-203ENST00000419007 A6NN06 94 aa8.76□□□□□ -1.01
SEMA3B-203ENST00000419007 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
SEMA3B-203ENST00000419007 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
SEMA3B-203ENST00000419007 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
SEMA3B-203ENST00000419007 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
SEMA3B-203ENST00000419007 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
SEMA3B-203ENST00000419007 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
SEMA3B-203ENST00000419007 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
SEMA3B-203ENST00000419007 A0A1B0GU69 56 aa8.68□□□□□ -1.02
SEMA3B-203ENST00000419007 HYDINQ4G0P3 5121 aa8.68□□□□□ -1.02
SEMA3B-203ENST00000419007 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
SEMA3B-203ENST00000419007 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
SEMA3B-203ENST00000419007 C7orf65Q6ZTY9 151 aa8.65□□□□□ -1.03
SEMA3B-203ENST00000419007 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
SEMA3B-203ENST00000419007 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
SEMA3B-203ENST00000419007 KMT2CQ8NEZ4 4911 aaKnown RBP8.6□□□□□ -1.03
SEMA3B-203ENST00000419007 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
SEMA3B-203ENST00000419007 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.04
SEMA3B-203ENST00000419007 A0A0A0MQY5 61 aa8.58□□□□□ -1.04
SEMA3B-203ENST00000419007 DNAH5Q8TE73 4624 aa8.58□□□□□ -1.04
SEMA3B-203ENST00000419007 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
SEMA3B-203ENST00000419007 SPINK1P00995 79 aa8.56□□□□□ -1.04
SEMA3B-203ENST00000419007 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
SEMA3B-203ENST00000419007 TYMSOSQ8TAI1 123 aa8.55□□□□□ -1.04
SEMA3B-203ENST00000419007 SACSQ9NZJ4 4579 aa8.54□□□□□ -1.04
SEMA3B-203ENST00000419007 Q6ZSA8 131 aa8.51□□□□□ -1.05
SEMA3B-203ENST00000419007 ADM2Q7Z4H4 148 aa8.51□□□□□ -1.05
SEMA3B-203ENST00000419007 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
SEMA3B-203ENST00000419007 Q8N1X5 172 aa8.51□□□□□ -1.05
SEMA3B-203ENST00000419007 UQCR11O14957 56 aa8.5□□□□□ -1.05
SEMA3B-203ENST00000419007 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
SEMA3B-203ENST00000419007 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
SEMA3B-203ENST00000419007 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
SEMA3B-203ENST00000419007 PKHD1P08F94 4074 aa8.4□□□□□ -1.06
SEMA3B-203ENST00000419007 PKD1P98161 4303 aa8.4□□□□□ -1.06
SEMA3B-203ENST00000419007 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
SEMA3B-203ENST00000419007 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
SEMA3B-203ENST00000419007 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
SEMA3B-203ENST00000419007 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
SEMA3B-203ENST00000419007 RYR2Q92736 4967 aa8.37□□□□□ -1.07
SEMA3B-203ENST00000419007 RYR3Q15413 4870 aa8.35□□□□□ -1.07
SEMA3B-203ENST00000419007 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
SEMA3B-203ENST00000419007 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
SEMA3B-203ENST00000419007 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
SEMA3B-203ENST00000419007 A0A1B0GVY2 172 aa8.18□□□□□ -1.1
SEMA3B-203ENST00000419007 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
SEMA3B-203ENST00000419007 FAT1Q14517 4588 aa8.18□□□□□ -1.1
SEMA3B-203ENST00000419007 H0YAA0 97 aa8.18□□□□□ -1.1
SEMA3B-203ENST00000419007 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
SEMA3B-203ENST00000419007 A8MUU9 505 aa8.16□□□□□ -1.1
SEMA3B-203ENST00000419007 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
SEMA3B-203ENST00000419007 A0A1B0GU33 70 aa8.15□□□□□ -1.1
SEMA3B-203ENST00000419007 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SEMA3B-203ENST00000419007 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
SEMA3B-203ENST00000419007 H1FX-AS1Q4G0G2 97 aa8.07□□□□□ -1.12
SEMA3B-203ENST00000419007 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
SEMA3B-203ENST00000419007 APOBP04114 4563 aaKnown RBP8.05□□□□□ -1.12
SEMA3B-203ENST00000419007 COX6B2Q6YFQ2 88 aa8.01□□□□□ -1.13
SEMA3B-203ENST00000419007 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms