RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 WDFY3Q8IZQ1 3526 aa6.65□□□□□ -1.34
SHROOM2-202ENST00000418909 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
SHROOM2-202ENST00000418909 SPINK7P58062 85 aa6.62□□□□□ -1.35
SHROOM2-202ENST00000418909 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
SHROOM2-202ENST00000418909 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
SHROOM2-202ENST00000418909 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
SHROOM2-202ENST00000418909 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
SHROOM2-202ENST00000418909 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
SHROOM2-202ENST00000418909 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
SHROOM2-202ENST00000418909 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
SHROOM2-202ENST00000418909 HRES1P13985 223 aa6.57□□□□□ -1.36
SHROOM2-202ENST00000418909 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
SHROOM2-202ENST00000418909 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
SHROOM2-202ENST00000418909 CELSR1Q9NYQ6 3014 aa6.56□□□□□ -1.36
SHROOM2-202ENST00000418909 Q5W150 140 aa6.54□□□□□ -1.36
SHROOM2-202ENST00000418909 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
SHROOM2-202ENST00000418909 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
SHROOM2-202ENST00000418909 MUC3AQ02505 3323 aa6.53□□□□□ -1.36
SHROOM2-202ENST00000418909 A6NN06 94 aa6.53□□□□□ -1.36
SHROOM2-202ENST00000418909 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
SHROOM2-202ENST00000418909 RELNP78509 3460 aa6.52□□□□□ -1.37
SHROOM2-202ENST00000418909 S4R3F8 94 aa6.51□□□□□ -1.37
SHROOM2-202ENST00000418909 Q5VV11 94 aa6.51□□□□□ -1.37
SHROOM2-202ENST00000418909 KRTAP13-2Q52LG2 175 aa6.5□□□□□ -1.37
SHROOM2-202ENST00000418909 ASPMQ8IZT6 3477 aa6.49□□□□□ -1.37
SHROOM2-202ENST00000418909 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
SHROOM2-202ENST00000418909 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
SHROOM2-202ENST00000418909 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
SHROOM2-202ENST00000418909 TGP01266 2768 aa6.43□□□□□ -1.38
SHROOM2-202ENST00000418909 A0A0D9SG42 100 aa6.43□□□□□ -1.38
SHROOM2-202ENST00000418909 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
SHROOM2-202ENST00000418909 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
SHROOM2-202ENST00000418909 DMDP11532 3685 aa6.43□□□□□ -1.38
SHROOM2-202ENST00000418909 VWFP04275 2813 aa6.41□□□□□ -1.38
SHROOM2-202ENST00000418909 LAMA5O15230 3695 aa6.4□□□□□ -1.39
SHROOM2-202ENST00000418909 R4GN34 69 aa6.38□□□□□ -1.39
SHROOM2-202ENST00000418909 A0A1B0GU33 70 aa6.38□□□□□ -1.39
SHROOM2-202ENST00000418909 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
SHROOM2-202ENST00000418909 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
SHROOM2-202ENST00000418909 ROMO1P60602 79 aa6.35□□□□□ -1.39
SHROOM2-202ENST00000418909 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
SHROOM2-202ENST00000418909 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
SHROOM2-202ENST00000418909 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
SHROOM2-202ENST00000418909 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
SHROOM2-202ENST00000418909 A0A1B0GVY2 172 aa6.31□□□□□ -1.4
SHROOM2-202ENST00000418909 NDUFAF8A1L188 74 aa6.29□□□□□ -1.4
SHROOM2-202ENST00000418909 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
SHROOM2-202ENST00000418909 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
SHROOM2-202ENST00000418909 SMG1Q96Q15 3661 aaKnown RBP6.28□□□□□ -1.4
SHROOM2-202ENST00000418909 A8MU10 97 aa6.27□□□□□ -1.41
SHROOM2-202ENST00000418909 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.41
SHROOM2-202ENST00000418909 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
SHROOM2-202ENST00000418909 M0QZ58 72 aa6.22□□□□□ -1.41
SHROOM2-202ENST00000418909 A8MUU9 505 aa6.22□□□□□ -1.41
SHROOM2-202ENST00000418909 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
SHROOM2-202ENST00000418909 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
SHROOM2-202ENST00000418909 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
SHROOM2-202ENST00000418909 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
SHROOM2-202ENST00000418909 XP32Q5T750 250 aa6.17□□□□□ -1.42
SHROOM2-202ENST00000418909 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
SHROOM2-202ENST00000418909 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
SHROOM2-202ENST00000418909 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
SHROOM2-202ENST00000418909 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
SHROOM2-202ENST00000418909 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
SHROOM2-202ENST00000418909 CUBNO60494 3623 aa6.02□□□□□ -1.45
SHROOM2-202ENST00000418909 ANK3Q12955 4377 aaKnown RBP6□□□□□ -1.45
SHROOM2-202ENST00000418909 SPENQ96T58 3664 aaKnown RBP6□□□□□ -1.45
SHROOM2-202ENST00000418909 CSMD2Q7Z408 3487 aa6□□□□□ -1.45
SHROOM2-202ENST00000418909 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
SHROOM2-202ENST00000418909 COL7A1Q02388 2944 aa5.94□□□□□ -1.46
SHROOM2-202ENST00000418909 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
SHROOM2-202ENST00000418909 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.46
SHROOM2-202ENST00000418909 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SHROOM2-202ENST00000418909 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
SHROOM2-202ENST00000418909 BSNQ9UPA5 3926 aa5.84□□□□□ -1.47
SHROOM2-202ENST00000418909 P0C880 135 aa5.74□□□□□ -1.49
SHROOM2-202ENST00000418909 TNP1P09430 55 aa5.73□□□□□ -1.49
SHROOM2-202ENST00000418909 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
SHROOM2-202ENST00000418909 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
SHROOM2-202ENST00000418909 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
SHROOM2-202ENST00000418909 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SHROOM2-202ENST00000418909 VPS13CQ709C8 3753 aa5.59□□□□□ -1.51
SHROOM2-202ENST00000418909 DNHD1Q96M86 4753 aa5.54□□□□□ -1.52
SHROOM2-202ENST00000418909 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
SHROOM2-202ENST00000418909 HUWE1Q7Z6Z7 4374 aaKnown RBP5.53□□□□□ -1.52
SHROOM2-202ENST00000418909 H0YAA0 97 aa5.47□□□□□ -1.53
SHROOM2-202ENST00000418909 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
SHROOM2-202ENST00000418909 DNAH9Q9NYC9 4486 aa5.41□□□□□ -1.54
SHROOM2-202ENST00000418909 ALMS1Q8TCU4 4167 aa5.4□□□□□ -1.55
SHROOM2-202ENST00000418909 ZNF469Q96JG9 3925 aaPredicted RBP5.39□□□□□ -1.55
SHROOM2-202ENST00000418909 AKAP9Q99996 3911 aa5.39□□□□□ -1.55
SHROOM2-202ENST00000418909 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
SHROOM2-202ENST00000418909 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SHROOM2-202ENST00000418909 DNAH5Q8TE73 4624 aa5.29□□□□□ -1.56
SHROOM2-202ENST00000418909 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
SHROOM2-202ENST00000418909 PLECQ15149 4684 aaKnown RBP5.24□□□□□ -1.57
SHROOM2-202ENST00000418909 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
SHROOM2-202ENST00000418909 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
SHROOM2-202ENST00000418909 DNAH1Q9P2D7 4330 aa5.2□□□□□ -1.58
SHROOM2-202ENST00000418909 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms