RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 H0Y9P7 68 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 PSPHP1O15172 72 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 DEFB4AO15263 64 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 Q5VV11 94 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 CASC2Q6XLA1 102 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 KTN1-AS1Q86SY8 53 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 WFDC10BQ8IUB3 73 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 TP53AIP1Q9HCN2 124 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 ZANQ9Y493 2812 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 A8MUN3 132 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 A8MWP4 228 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 CHKB-CPT1BH3BT56 60 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 SPRR1BP22528 89 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
VPS41-206ENST00000418457 MOBPQ13875 183 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 IGFL1Q6UW32 110 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 PHF5AQ7RTV0 110 aaKnown RBP1.51□□□□□ -2.17
VPS41-206ENST00000418457 WFDC13Q8IUB5 93 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 ST20-AS1Q8NBB2 130 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 PRR15LQ9BU68 103 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 RBM12B-AS1Q9P1G2 102 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 JMJD1CQ15652 2540 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
VPS41-206ENST00000418457 TRRAPQ9Y4A5 3859 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 DNAH1Q9P2D7 4330 aa1.51□□□□□ -2.17
VPS41-206ENST00000418457 NSD1Q96L73 2696 aaPredicted RBP1.51□□□□□ -2.17
VPS41-206ENST00000418457 MTORP42345 2549 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
VPS41-206ENST00000418457 A0A087WSZ3 146 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 DEFB131BA0A096LNP1 70 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 A0A1B0GVX0 72 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 A6NED7 52 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 KRTAP5-9P26371 169 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 LINC01558Q9Y6Z2 57 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 NBEAL1Q6ZS30 2694 aa1.5□□□□□ -2.17
VPS41-206ENST00000418457 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
VPS41-206ENST00000418457 SPRR5A0A1B0GTR4 108 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 C16orf90A8MZG2 172 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 CNBPP62633 177 aaKnown RBP1.49□□□□□ -2.17
VPS41-206ENST00000418457 ASB16-AS1Q495Z4 193 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 C7orf65Q6ZTY9 151 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
VPS41-206ENST00000418457 COA5Q86WW8 74 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 LINC00472Q9H8W2 130 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 PLAC8Q9NZF1 115 aa1.49□□□□□ -2.17
VPS41-206ENST00000418457 FLNAP21333 2647 aaKnown RBP1.49□□□□□ -2.17
VPS41-206ENST00000418457 MMP24-AS1A0A0U1RRL7 71 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 A6NN06 94 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 Q5W150 140 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 ZNF706Q9Y5V0 76 aaPredicted RBP1.48□□□□□ -2.17
VPS41-206ENST00000418457 CCDC168Q8NDH2 2452 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 STAB1Q9NY15 2570 aa1.48□□□□□ -2.17
VPS41-206ENST00000418457 PRLHP81277 87 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 PP632Q6XCG6 107 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 LCA10Q71F78 164 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 C8orf17Q9NRJ1 99 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 HIVEP2P31629 2446 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 DNAH3Q8TD57 4116 aa1.47□□□□□ -2.17
VPS41-206ENST00000418457 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.17
VPS41-206ENST00000418457 SONP18583 2426 aaKnown RBP1.46□□□□□ -2.18
VPS41-206ENST00000418457 A0A096LNI7 61 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 IGKV2-24A0A0C4DH68 120 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 ACYP2P14621 99 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 KRTAP10-10P60014 251 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 MRPL34Q9BQ48 92 aaKnown RBP1.46□□□□□ -2.18
VPS41-206ENST00000418457 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 EPPK1P58107 5090 aaKnown RBP1.46□□□□□ -2.18
VPS41-206ENST00000418457 SACSQ9NZJ4 4579 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 ALMS1Q8TCU4 4167 aa1.46□□□□□ -2.18
VPS41-206ENST00000418457 ACANP16112 2415 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 IGHV6-1A0A0B4J1U7 121 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 A0A1W2PNN7 141 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 HRES1P13985 223 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 SPAG11AQ6PDA7 123 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 KRTAP13-1Q8IUC0 172 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 Q96NJ1 140 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 RYR2Q92736 4967 aa1.45□□□□□ -2.18
VPS41-206ENST00000418457 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
VPS41-206ENST00000418457 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 ATRQ13535 2644 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 A0A0G2JQZ4 141 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 LINC00313P59037 77 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 PCOTHQ58A44 107 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
VPS41-206ENST00000418457 DNAH9Q9NYC9 4486 aa1.43□□□□□ -2.18
VPS41-206ENST00000418457 SPINK7P58062 85 aa1.43□□□□□ -2.18
VPS41-206ENST00000418457 UBE2DNLQ8IWF7 75 aa1.43□□□□□ -2.18
VPS41-206ENST00000418457 DMAC1Q96GE9 116 aa1.43□□□□□ -2.18
VPS41-206ENST00000418457 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
VPS41-206ENST00000418457 TGP01266 2768 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 A0A1B0GU69 56 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 UQCR11O14957 56 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 KRTAP10-1P60331 282 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 LINC01554Q52M75 96 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 SPATA8Q6RVD6 105 aa1.42□□□□□ -2.18
VPS41-206ENST00000418457 RETNLBQ9BQ08 111 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms