RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 HCG22E2RYF7 251 aa11.92□□□□□ -0.5
CASC3-203ENST00000418132 KRTAP10-8P60410 259 aa11.92□□□□□ -0.5
CASC3-203ENST00000418132 KLKP1Q107X0 134 aa11.92□□□□□ -0.5
CASC3-203ENST00000418132 SNURFQ9Y675 71 aa11.91□□□□□ -0.5
CASC3-203ENST00000418132 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
CASC3-203ENST00000418132 TMEM258P61165 79 aa11.9□□□□□ -0.5
CASC3-203ENST00000418132 FLG2Q5D862 2391 aaPredicted RBP11.9□□□□□ -0.5
CASC3-203ENST00000418132 LRP1Q07954 4544 aaKnown RBP11.9□□□□□ -0.51
CASC3-203ENST00000418132 A8MWP4 228 aa11.89□□□□□ -0.51
CASC3-203ENST00000418132 C1orf195Q5TG92 126 aa11.87□□□□□ -0.51
CASC3-203ENST00000418132 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
CASC3-203ENST00000418132 KRTAP4-5Q9BYR2 181 aa11.87□□□□□ -0.51
CASC3-203ENST00000418132 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
CASC3-203ENST00000418132 H7BZZ5 65 aa11.84□□□□□ -0.51
CASC3-203ENST00000418132 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
CASC3-203ENST00000418132 NDUFB1O75438 58 aa11.83□□□□□ -0.52
CASC3-203ENST00000418132 FAT3Q8TDW7 4589 aa11.83□□□□□ -0.52
CASC3-203ENST00000418132 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
CASC3-203ENST00000418132 TNXBP22105 4242 aa11.8□□□□□ -0.52
CASC3-203ENST00000418132 A0A0U1RQV1 116 aa11.79□□□□□ -0.52
CASC3-203ENST00000418132 MYCBP2O75592 4640 aa11.78□□□□□ -0.52
CASC3-203ENST00000418132 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
CASC3-203ENST00000418132 MT1HL1P0DM35 61 aa11.78□□□□□ -0.52
CASC3-203ENST00000418132 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
CASC3-203ENST00000418132 OXTP01178 125 aa11.76□□□□□ -0.53
CASC3-203ENST00000418132 HERC2O95714 4834 aa11.76□□□□□ -0.53
CASC3-203ENST00000418132 NDUFC1O43677 76 aa11.76□□□□□ -0.53
CASC3-203ENST00000418132 IGHV6-1A0A0B4J1U7 121 aa11.73□□□□□ -0.53
CASC3-203ENST00000418132 MMP24-AS1A0A0U1RRL7 71 aa11.72□□□□□ -0.53
CASC3-203ENST00000418132 FAM236DA0A1B0GTK5 79 aa11.72□□□□□ -0.53
CASC3-203ENST00000418132 FAM236CP0DP71 79 aa11.72□□□□□ -0.53
CASC3-203ENST00000418132 C5orf47Q569G3 176 aa11.7□□□□□ -0.54
CASC3-203ENST00000418132 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
CASC3-203ENST00000418132 RPS28P62857 69 aaKnown RBP11.69□□□□□ -0.54
CASC3-203ENST00000418132 DMBT1Q9UGM3 2413 aaPredicted RBP11.67□□□□□ -0.54
CASC3-203ENST00000418132 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
CASC3-203ENST00000418132 hDV103S1A0JD37 113 aa11.66□□□□□ -0.54
CASC3-203ENST00000418132 ABCA13Q86UQ4 5058 aa11.65□□□□□ -0.54
CASC3-203ENST00000418132 C8orf87E5RJ46 101 aa11.65□□□□□ -0.55
CASC3-203ENST00000418132 ZCCHC13Q8WW36 166 aaKnown RBP11.63□□□□□ -0.55
CASC3-203ENST00000418132 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
CASC3-203ENST00000418132 LINC00313P59037 77 aa11.59□□□□□ -0.55
CASC3-203ENST00000418132 MP68P56378 58 aa11.58□□□□□ -0.56
CASC3-203ENST00000418132 ATP5EP56381 51 aaPredicted RBP11.56□□□□□ -0.56
CASC3-203ENST00000418132 MRPL34Q9BQ48 92 aaKnown RBP11.56□□□□□ -0.56
CASC3-203ENST00000418132 H0Y9P7 68 aa11.55□□□□□ -0.56
CASC3-203ENST00000418132 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
CASC3-203ENST00000418132 LINC00208Q96KT6 92 aa11.54□□□□□ -0.56
CASC3-203ENST00000418132 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
CASC3-203ENST00000418132 FP248Q71RG6 208 aaPredicted RBP11.51□□□□□ -0.57
CASC3-203ENST00000418132 H3BPC8 53 aa11.49□□□□□ -0.57
CASC3-203ENST00000418132 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
CASC3-203ENST00000418132 TRAV22A0A0B4J277 110 aa11.48□□□□□ -0.57
CASC3-203ENST00000418132 NDUFS5O43920 106 aa11.47□□□□□ -0.57
CASC3-203ENST00000418132 Q8N9P0 234 aaPredicted RBP11.45□□□□□ -0.58
CASC3-203ENST00000418132 C1orf64Q8NEQ6 169 aa11.45□□□□□ -0.58
CASC3-203ENST00000418132 J3QL48 77 aa11.45□□□□□ -0.58
CASC3-203ENST00000418132 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
CASC3-203ENST00000418132 IGLV7-46A0A075B6I9 117 aa11.4□□□□□ -0.58
CASC3-203ENST00000418132 PRR4Q16378 134 aa11.36□□□□□ -0.59
CASC3-203ENST00000418132 KRTAP13-3Q3SY46 172 aa11.32□□□□□ -0.6
CASC3-203ENST00000418132 CYP4F30PQ9H0H9 118 aa11.32□□□□□ -0.6
CASC3-203ENST00000418132 C20orf166-AS1Q96NR2 134 aa11.32□□□□□ -0.6
CASC3-203ENST00000418132 PCLOQ9Y6V0 5065 aa11.31□□□□□ -0.6
CASC3-203ENST00000418132 A8MUU9 505 aa11.3□□□□□ -0.6
CASC3-203ENST00000418132 SPANXA2-OT1Q8N9U9 137 aa11.3□□□□□ -0.6
CASC3-203ENST00000418132 SMIM26A0A096LP01 95 aa11.29□□□□□ -0.6
CASC3-203ENST00000418132 Q5W150 140 aa11.29□□□□□ -0.6
CASC3-203ENST00000418132 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
CASC3-203ENST00000418132 TPRXLQ17RH7 258 aa11.24□□□□□ -0.61
CASC3-203ENST00000418132 Q75L30 129 aa11.23□□□□□ -0.61
CASC3-203ENST00000418132 C4orf26Q17RF5 130 aa11.22□□□□□ -0.61
CASC3-203ENST00000418132 XP32Q5T750 250 aa11.21□□□□□ -0.62
CASC3-203ENST00000418132 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
CASC3-203ENST00000418132 RPL37P61927 97 aaKnown RBP11.14□□□□□ -0.63
CASC3-203ENST00000418132 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
CASC3-203ENST00000418132 IGKV2-30P06310 120 aa11.08□□□□□ -0.64
CASC3-203ENST00000418132 ATP11AUNQ6ZP68 121 aa11.05□□□□□ -0.64
CASC3-203ENST00000418132 LPAP08519 4548 aa11.03□□□□□ -0.64
CASC3-203ENST00000418132 COA5Q86WW8 74 aa11.02□□□□□ -0.65
CASC3-203ENST00000418132 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
CASC3-203ENST00000418132 HERC1Q15751 4861 aa11□□□□□ -0.65
CASC3-203ENST00000418132 Q1T7F1 81 aa10.99□□□□□ -0.65
CASC3-203ENST00000418132 LRP2P98164 4655 aa10.98□□□□□ -0.65
CASC3-203ENST00000418132 HRES1P13985 223 aa10.97□□□□□ -0.65
CASC3-203ENST00000418132 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
CASC3-203ENST00000418132 SPINK7P58062 85 aa10.92□□□□□ -0.66
CASC3-203ENST00000418132 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
CASC3-203ENST00000418132 V9GYY9 64 aa10.86□□□□□ -0.67
CASC3-203ENST00000418132 ACYP2P14621 99 aa10.85□□□□□ -0.67
CASC3-203ENST00000418132 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
CASC3-203ENST00000418132 PSPHP1O15172 72 aa10.84□□□□□ -0.67
CASC3-203ENST00000418132 SEC61BP60468 96 aaKnown RBP10.83□□□□□ -0.68
CASC3-203ENST00000418132 A8MUN3 132 aa10.78□□□□□ -0.68
CASC3-203ENST00000418132 PRR15LQ9BU68 103 aa10.71□□□□□ -0.69
CASC3-203ENST00000418132 CHKB-CPT1BH3BT56 60 aa10.7□□□□□ -0.7
CASC3-203ENST00000418132 Q5VV11 94 aa10.7□□□□□ -0.7
CASC3-203ENST00000418132 LINC01558Q9Y6Z2 57 aa10.69□□□□□ -0.7
CASC3-203ENST00000418132 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
CASC3-203ENST00000418132 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms