RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
COMMD3-BMI1-201ENST00000417470 Q75L30 129 aa9.41□□□□□ -0.9
COMMD3-BMI1-201ENST00000417470 LINC00313P59037 77 aa9.38□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 NREPQ16612 68 aa9.38□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 DSCR10P59022 87 aa9.36□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 A8MUU9 505 aa9.35□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
COMMD3-BMI1-201ENST00000417470 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 NDUFB1O75438 58 aa9.33□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 A8MWP4 228 aa9.32□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
COMMD3-BMI1-201ENST00000417470 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 Q6ZVQ6 151 aa9.26□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 PRR15Q8IV56 129 aa9.26□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 BPY2O14599 106 aa9.23□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
COMMD3-BMI1-201ENST00000417470 UBL5Q9BZL1 73 aa9.21□□□□□ -0.94
COMMD3-BMI1-201ENST00000417470 A0A1B0GV90 55 aa9.19□□□□□ -0.94
COMMD3-BMI1-201ENST00000417470 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-BMI1-201ENST00000417470 K7EQZ3 153 aa9.17□□□□□ -0.94
COMMD3-BMI1-201ENST00000417470 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 KRTAP19-2Q3LHN2 52 aa9.13□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 TMEM254Q8TBM7 123 aa9.13□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 ACYP1P07311 99 aa9.12□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 FAM240AA0A1B0GVK7 77 aa9.1□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
COMMD3-BMI1-201ENST00000417470 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
COMMD3-BMI1-201ENST00000417470 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
COMMD3-BMI1-201ENST00000417470 CXCL6P80162 114 aa9.07□□□□□ -0.96
COMMD3-BMI1-201ENST00000417470 Q8N9L7 120 aa9.06□□□□□ -0.96
COMMD3-BMI1-201ENST00000417470 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
COMMD3-BMI1-201ENST00000417470 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
COMMD3-BMI1-201ENST00000417470 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
COMMD3-BMI1-201ENST00000417470 NDUFS5O43920 106 aa8.95□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 HRES1P13985 223 aa8.94□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 SPINK7P58062 85 aa8.93□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 MT1HP80294 61 aa8.93□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 J3QR89 54 aa8.9□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
COMMD3-BMI1-201ENST00000417470 Q5W150 140 aa8.88□□□□□ -0.99
COMMD3-BMI1-201ENST00000417470 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
COMMD3-BMI1-201ENST00000417470 TP53AIP1Q9HCN2 124 aa8.84□□□□□ -0.99
COMMD3-BMI1-201ENST00000417470 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
COMMD3-BMI1-201ENST00000417470 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
COMMD3-BMI1-201ENST00000417470 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
COMMD3-BMI1-201ENST00000417470 FAM236CP0DP71 79 aa8.78□□□□□ -1
COMMD3-BMI1-201ENST00000417470 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
COMMD3-BMI1-201ENST00000417470 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
COMMD3-BMI1-201ENST00000417470 M0R2T5 61 aa8.74□□□□□ -1.01
COMMD3-BMI1-201ENST00000417470 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
COMMD3-BMI1-201ENST00000417470 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-BMI1-201ENST00000417470 A0A087WVE0 104 aa8.7□□□□□ -1.02
COMMD3-BMI1-201ENST00000417470 K7ERU9 68 aa8.7□□□□□ -1.02
COMMD3-BMI1-201ENST00000417470 UQCRQO14949 82 aa8.65□□□□□ -1.02
COMMD3-BMI1-201ENST00000417470 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
COMMD3-BMI1-201ENST00000417470 IMUPQ9GZP8 106 aa8.61□□□□□ -1.03
COMMD3-BMI1-201ENST00000417470 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
COMMD3-BMI1-201ENST00000417470 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 ATOX1O00244 68 aa8.58□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 OCR1Q9BZK8 76 aa8.57□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 H0Y9P7 68 aa8.54□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 KRTAP9-8Q9BYQ0 159 aa8.53□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 KRTAP4-6Q9BYQ5 205 aa8.53□□□□□ -1.04
COMMD3-BMI1-201ENST00000417470 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
COMMD3-BMI1-201ENST00000417470 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
COMMD3-BMI1-201ENST00000417470 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
COMMD3-BMI1-201ENST00000417470 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
COMMD3-BMI1-201ENST00000417470 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
COMMD3-BMI1-201ENST00000417470 MP68P56378 58 aa8.46□□□□□ -1.06
COMMD3-BMI1-201ENST00000417470 H3BPC8 53 aa8.43□□□□□ -1.06
COMMD3-BMI1-201ENST00000417470 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
COMMD3-BMI1-201ENST00000417470 MT2AP02795 61 aa8.41□□□□□ -1.06
COMMD3-BMI1-201ENST00000417470 SMIM20Q8N5G0 67 aa8.39□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 S4R3F8 94 aa8.35□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 MT1FP04733 61 aa8.34□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 KLKP1Q107X0 134 aa8.34□□□□□ -1.07
COMMD3-BMI1-201ENST00000417470 TRAV7A0A075B6U4 112 aa8.33□□□□□ -1.08
COMMD3-BMI1-201ENST00000417470 A8MUN3 132 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms