RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
VCP-202ENST00000417448 Q6ZQT0 140 aa9.58□□□□□ -0.88
VCP-202ENST00000417448 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
VCP-202ENST00000417448 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
VCP-202ENST00000417448 IGKV4-1P06312 121 aa9.56□□□□□ -0.88
VCP-202ENST00000417448 H3BT86 120 aa9.55□□□□□ -0.88
VCP-202ENST00000417448 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
VCP-202ENST00000417448 LINC00472Q9H8W2 130 aa9.55□□□□□ -0.88
VCP-202ENST00000417448 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
VCP-202ENST00000417448 DSCR10P59022 87 aa9.53□□□□□ -0.88
VCP-202ENST00000417448 K7EP34 96 aa9.51□□□□□ -0.89
VCP-202ENST00000417448 FCGBPQ9Y6R7 5405 aaPredicted RBP9.51□□□□□ -0.89
VCP-202ENST00000417448 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
VCP-202ENST00000417448 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
VCP-202ENST00000417448 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
VCP-202ENST00000417448 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
VCP-202ENST00000417448 PDE6GP18545 87 aa9.47□□□□□ -0.89
VCP-202ENST00000417448 IGHV6-1A0A0B4J1U7 121 aa9.44□□□□□ -0.9
VCP-202ENST00000417448 LINC00313P59037 77 aa9.42□□□□□ -0.9
VCP-202ENST00000417448 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
VCP-202ENST00000417448 SYNE2Q8WXH0 6885 aaKnown RBP9.38□□□□□ -0.91
VCP-202ENST00000417448 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
VCP-202ENST00000417448 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
VCP-202ENST00000417448 NREPQ16612 68 aa9.38□□□□□ -0.91
VCP-202ENST00000417448 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
VCP-202ENST00000417448 Q75L30 129 aa9.38□□□□□ -0.91
VCP-202ENST00000417448 A0A1B0GW54 56 aa9.36□□□□□ -0.91
VCP-202ENST00000417448 A8MUU9 505 aa9.36□□□□□ -0.91
VCP-202ENST00000417448 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
VCP-202ENST00000417448 KRTAP9-8Q9BYQ0 159 aa9.35□□□□□ -0.91
VCP-202ENST00000417448 MACF1Q9UPN3 7388 aaKnown RBP9.34□□□□□ -0.91
VCP-202ENST00000417448 J3KT08 172 aa9.34□□□□□ -0.91
VCP-202ENST00000417448 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
VCP-202ENST00000417448 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
VCP-202ENST00000417448 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
VCP-202ENST00000417448 F8W1H4 67 aa9.3□□□□□ -0.92
VCP-202ENST00000417448 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
VCP-202ENST00000417448 A8MWP4 228 aa9.29□□□□□ -0.92
VCP-202ENST00000417448 NDUFB1O75438 58 aa9.29□□□□□ -0.92
VCP-202ENST00000417448 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
VCP-202ENST00000417448 Q6ZVQ6 151 aa9.27□□□□□ -0.93
VCP-202ENST00000417448 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
VCP-202ENST00000417448 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
VCP-202ENST00000417448 A0A1B0GV90 55 aa9.24□□□□□ -0.93
VCP-202ENST00000417448 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
VCP-202ENST00000417448 K7EQZ3 153 aa9.23□□□□□ -0.93
VCP-202ENST00000417448 BPY2O14599 106 aa9.23□□□□□ -0.93
VCP-202ENST00000417448 LCE2BO14633 110 aa9.22□□□□□ -0.93
VCP-202ENST00000417448 Q8N9L7 120 aa9.22□□□□□ -0.93
VCP-202ENST00000417448 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
VCP-202ENST00000417448 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
VCP-202ENST00000417448 MT2AP02795 61 aa9.14□□□□□ -0.95
VCP-202ENST00000417448 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
VCP-202ENST00000417448 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
VCP-202ENST00000417448 ZCCHC13Q8WW36 166 aaKnown RBP9.11□□□□□ -0.95
VCP-202ENST00000417448 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
VCP-202ENST00000417448 TMEM254Q8TBM7 123 aa9.1□□□□□ -0.95
VCP-202ENST00000417448 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
VCP-202ENST00000417448 MT1FP04733 61 aa9.08□□□□□ -0.96
VCP-202ENST00000417448 NDUFS5O43920 106 aa9.07□□□□□ -0.96
VCP-202ENST00000417448 KRTAP9-3Q9BYQ3 159 aa9.07□□□□□ -0.96
VCP-202ENST00000417448 CASC2Q6XLA1 102 aa9.04□□□□□ -0.96
VCP-202ENST00000417448 HRES1P13985 223 aa9.01□□□□□ -0.97
VCP-202ENST00000417448 SPINK7P58062 85 aa8.99□□□□□ -0.97
VCP-202ENST00000417448 KRTAP6-3Q3LI67 103 aa8.99□□□□□ -0.97
VCP-202ENST00000417448 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
VCP-202ENST00000417448 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
VCP-202ENST00000417448 Q5W150 140 aa8.97□□□□□ -0.97
VCP-202ENST00000417448 ACYP1P07311 99 aa8.95□□□□□ -0.98
VCP-202ENST00000417448 CXCL6P80162 114 aa8.95□□□□□ -0.98
VCP-202ENST00000417448 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
VCP-202ENST00000417448 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
VCP-202ENST00000417448 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
VCP-202ENST00000417448 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
VCP-202ENST00000417448 FAM240AA0A1B0GVK7 77 aa8.92□□□□□ -0.98
VCP-202ENST00000417448 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
VCP-202ENST00000417448 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
VCP-202ENST00000417448 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
VCP-202ENST00000417448 NEBP20929 6669 aa8.84□□□□□ -0.99
VCP-202ENST00000417448 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
VCP-202ENST00000417448 LINC00643Q86TS7 51 aa8.8□□□□□ -1
VCP-202ENST00000417448 A0A087WVE0 104 aa8.79□□□□□ -1
VCP-202ENST00000417448 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
VCP-202ENST00000417448 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
VCP-202ENST00000417448 J3QR89 54 aa8.73□□□□□ -1.01
VCP-202ENST00000417448 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
VCP-202ENST00000417448 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
VCP-202ENST00000417448 MUC12Q9UKN1 5478 aa8.68□□□□□ -1.02
VCP-202ENST00000417448 KRTAP20-1Q3LI63 56 aa8.67□□□□□ -1.02
VCP-202ENST00000417448 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
VCP-202ENST00000417448 TRAV22A0A0B4J277 110 aa8.61□□□□□ -1.03
VCP-202ENST00000417448 UQCRQO14949 82 aa8.58□□□□□ -1.04
VCP-202ENST00000417448 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
VCP-202ENST00000417448 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
VCP-202ENST00000417448 H0Y9P7 68 aa8.57□□□□□ -1.04
VCP-202ENST00000417448 K7ERU9 68 aa8.56□□□□□ -1.04
VCP-202ENST00000417448 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
VCP-202ENST00000417448 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
VCP-202ENST00000417448 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
VCP-202ENST00000417448 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms