RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 LAMA5O15230 3695 aa7.7□□□□□ -1.18
SCAF8-203ENST00000417268 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
SCAF8-203ENST00000417268 PDZD2O15018 2839 aa7.69□□□□□ -1.18
SCAF8-203ENST00000417268 DMDP11532 3685 aa7.66□□□□□ -1.18
SCAF8-203ENST00000417268 KRTAP4-16G5E9R7 235 aaPredicted RBP7.65□□□□□ -1.18
SCAF8-203ENST00000417268 KRTAP29-1A8MX34 341 aaPredicted RBP7.65□□□□□ -1.18
SCAF8-203ENST00000417268 Q5W150 140 aa7.64□□□□□ -1.19
SCAF8-203ENST00000417268 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
SCAF8-203ENST00000417268 A8MU10 97 aa7.59□□□□□ -1.2
SCAF8-203ENST00000417268 A6NN06 94 aa7.57□□□□□ -1.2
SCAF8-203ENST00000417268 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
SCAF8-203ENST00000417268 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
SCAF8-203ENST00000417268 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
SCAF8-203ENST00000417268 Q6ZSA8 131 aa7.56□□□□□ -1.2
SCAF8-203ENST00000417268 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
SCAF8-203ENST00000417268 WDFY3Q8IZQ1 3526 aa7.53□□□□□ -1.2
SCAF8-203ENST00000417268 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
SCAF8-203ENST00000417268 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
SCAF8-203ENST00000417268 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
SCAF8-203ENST00000417268 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
SCAF8-203ENST00000417268 A0A087X002 238 aa7.49□□□□□ -1.21
SCAF8-203ENST00000417268 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
SCAF8-203ENST00000417268 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
SCAF8-203ENST00000417268 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
SCAF8-203ENST00000417268 TENM3Q9P273 2699 aa7.44□□□□□ -1.22
SCAF8-203ENST00000417268 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
SCAF8-203ENST00000417268 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
SCAF8-203ENST00000417268 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
SCAF8-203ENST00000417268 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
SCAF8-203ENST00000417268 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.22
SCAF8-203ENST00000417268 SMG1Q96Q15 3661 aaKnown RBP7.38□□□□□ -1.23
SCAF8-203ENST00000417268 TENM2Q9NT68 2774 aa7.37□□□□□ -1.23
SCAF8-203ENST00000417268 ROMO1P60602 79 aa7.37□□□□□ -1.23
SCAF8-203ENST00000417268 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
SCAF8-203ENST00000417268 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
SCAF8-203ENST00000417268 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
SCAF8-203ENST00000417268 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
SCAF8-203ENST00000417268 FBN1P35555 2871 aaKnown RBP7.32□□□□□ -1.24
SCAF8-203ENST00000417268 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
SCAF8-203ENST00000417268 PKD1L1Q8TDX9 2849 aa7.31□□□□□ -1.24
SCAF8-203ENST00000417268 VWFP04275 2813 aa7.3□□□□□ -1.24
SCAF8-203ENST00000417268 ZFHX3Q15911 3703 aa7.29□□□□□ -1.24
SCAF8-203ENST00000417268 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
SCAF8-203ENST00000417268 M0R2T5 61 aa7.28□□□□□ -1.24
SCAF8-203ENST00000417268 S4R3F8 94 aa7.28□□□□□ -1.24
SCAF8-203ENST00000417268 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
SCAF8-203ENST00000417268 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
SCAF8-203ENST00000417268 TGP01266 2768 aa7.19□□□□□ -1.26
SCAF8-203ENST00000417268 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.27
SCAF8-203ENST00000417268 R4GN34 69 aa7.15□□□□□ -1.27
SCAF8-203ENST00000417268 CSMD1Q96PZ7 3565 aa7.14□□□□□ -1.27
SCAF8-203ENST00000417268 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
SCAF8-203ENST00000417268 ANK3Q12955 4377 aaKnown RBP7.12□□□□□ -1.27
SCAF8-203ENST00000417268 CSMD2Q7Z408 3487 aa7.12□□□□□ -1.27
SCAF8-203ENST00000417268 SPENQ96T58 3664 aaKnown RBP7.12□□□□□ -1.27
SCAF8-203ENST00000417268 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
SCAF8-203ENST00000417268 BSNQ9UPA5 3926 aa7.1□□□□□ -1.27
SCAF8-203ENST00000417268 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
SCAF8-203ENST00000417268 M0QZ58 72 aa7.05□□□□□ -1.28
SCAF8-203ENST00000417268 A8MUU9 505 aa7.05□□□□□ -1.28
SCAF8-203ENST00000417268 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
SCAF8-203ENST00000417268 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
SCAF8-203ENST00000417268 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
SCAF8-203ENST00000417268 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
SCAF8-203ENST00000417268 XP32Q5T750 250 aa6.88□□□□□ -1.31
SCAF8-203ENST00000417268 H0YAA0 97 aa6.88□□□□□ -1.31
SCAF8-203ENST00000417268 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
SCAF8-203ENST00000417268 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
SCAF8-203ENST00000417268 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
SCAF8-203ENST00000417268 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
SCAF8-203ENST00000417268 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
SCAF8-203ENST00000417268 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
SCAF8-203ENST00000417268 CUBNO60494 3623 aa6.75□□□□□ -1.33
SCAF8-203ENST00000417268 MEGF8Q7Z7M0 2845 aa6.71□□□□□ -1.34
SCAF8-203ENST00000417268 COL7A1Q02388 2944 aa6.65□□□□□ -1.34
SCAF8-203ENST00000417268 P0C880 135 aa6.64□□□□□ -1.35
SCAF8-203ENST00000417268 ZNF469Q96JG9 3925 aaPredicted RBP6.6□□□□□ -1.35
SCAF8-203ENST00000417268 AKAP9Q99996 3911 aa6.56□□□□□ -1.36
SCAF8-203ENST00000417268 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
SCAF8-203ENST00000417268 TNP1P09430 55 aa6.54□□□□□ -1.36
SCAF8-203ENST00000417268 VPS13CQ709C8 3753 aa6.51□□□□□ -1.37
SCAF8-203ENST00000417268 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
SCAF8-203ENST00000417268 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
SCAF8-203ENST00000417268 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SCAF8-203ENST00000417268 DNAH9Q9NYC9 4486 aa6.39□□□□□ -1.39
SCAF8-203ENST00000417268 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
SCAF8-203ENST00000417268 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
SCAF8-203ENST00000417268 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
SCAF8-203ENST00000417268 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
SCAF8-203ENST00000417268 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
SCAF8-203ENST00000417268 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
SCAF8-203ENST00000417268 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
SCAF8-203ENST00000417268 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
SCAF8-203ENST00000417268 KRTAP10-6P60371 365 aaPredicted RBP6.16□□□□□ -1.42
SCAF8-203ENST00000417268 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
SCAF8-203ENST00000417268 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
SCAF8-203ENST00000417268 DNAH5Q8TE73 4624 aa6.15□□□□□ -1.42
SCAF8-203ENST00000417268 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
SCAF8-203ENST00000417268 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
SCAF8-203ENST00000417268 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms