RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 TMEM254Q8TBM7 123 aa13.7□□□□□ -0.22
LINC01342-201ENST00000416774 TMEM258P61165 79 aa13.68□□□□□ -0.22
LINC01342-201ENST00000416774 FAT1Q14517 4588 aa13.67□□□□□ -0.22
LINC01342-201ENST00000416774 NDUFC1O43677 76 aa13.67□□□□□ -0.22
LINC01342-201ENST00000416774 KRTAP10-4P60372 401 aaPredicted RBP13.67□□□□□ -0.22
LINC01342-201ENST00000416774 C8orf17Q9NRJ1 99 aa13.67□□□□□ -0.22
LINC01342-201ENST00000416774 C5orf47Q569G3 176 aa13.66□□□□□ -0.22
LINC01342-201ENST00000416774 TYMSOSQ8TAI1 123 aa13.66□□□□□ -0.22
LINC01342-201ENST00000416774 LIMD2Q9BT23 127 aa13.66□□□□□ -0.22
LINC01342-201ENST00000416774 hDV103S1A0JD37 113 aa13.65□□□□□ -0.22
LINC01342-201ENST00000416774 A0A0U1RQV1 116 aa13.64□□□□□ -0.23
LINC01342-201ENST00000416774 C4orf48Q5BLP8 95 aa13.62□□□□□ -0.23
LINC01342-201ENST00000416774 SNURFQ9Y675 71 aa13.62□□□□□ -0.23
LINC01342-201ENST00000416774 IGHV6-1A0A0B4J1U7 121 aa13.61□□□□□ -0.23
LINC01342-201ENST00000416774 SPINK1P00995 79 aa13.6□□□□□ -0.23
LINC01342-201ENST00000416774 H7BZZ5 65 aa13.59□□□□□ -0.23
LINC01342-201ENST00000416774 ABCA13Q86UQ4 5058 aa13.58□□□□□ -0.24
LINC01342-201ENST00000416774 RPS29P62273 56 aaKnown RBP13.57□□□□□ -0.24
LINC01342-201ENST00000416774 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
LINC01342-201ENST00000416774 C8orf87E5RJ46 101 aa13.56□□□□□ -0.24
LINC01342-201ENST00000416774 C1orf195Q5TG92 126 aa13.56□□□□□ -0.24
LINC01342-201ENST00000416774 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
LINC01342-201ENST00000416774 TP53AIP1Q9HCN2 124 aa13.54□□□□□ -0.24
LINC01342-201ENST00000416774 PRR26Q8N8Z3 221 aa13.53□□□□□ -0.24
LINC01342-201ENST00000416774 MP68P56378 58 aa13.53□□□□□ -0.24
LINC01342-201ENST00000416774 H3BPC8 53 aa13.52□□□□□ -0.25
LINC01342-201ENST00000416774 MRPL34Q9BQ48 92 aaKnown RBP13.52□□□□□ -0.25
LINC01342-201ENST00000416774 ZCCHC13Q8WW36 166 aaKnown RBP13.51□□□□□ -0.25
LINC01342-201ENST00000416774 LINC00304Q8N9R0 145 aa13.5□□□□□ -0.25
LINC01342-201ENST00000416774 NOTCH2NLQ7Z3S9 236 aa13.46□□□□□ -0.26
LINC01342-201ENST00000416774 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
LINC01342-201ENST00000416774 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
LINC01342-201ENST00000416774 H0Y9P7 68 aa13.44□□□□□ -0.26
LINC01342-201ENST00000416774 ATP5EP56381 51 aaPredicted RBP13.44□□□□□ -0.26
LINC01342-201ENST00000416774 TRAV22A0A0B4J277 110 aa13.41□□□□□ -0.26
LINC01342-201ENST00000416774 LINC00313P59037 77 aa13.41□□□□□ -0.26
LINC01342-201ENST00000416774 RPS28P62857 69 aaKnown RBP13.4□□□□□ -0.26
LINC01342-201ENST00000416774 LINC00208Q96KT6 92 aa13.37□□□□□ -0.27
LINC01342-201ENST00000416774 PKHD1L1Q86WI1 4243 aa13.37□□□□□ -0.27
LINC01342-201ENST00000416774 NDUFS5O43920 106 aa13.36□□□□□ -0.27
LINC01342-201ENST00000416774 C1orf64Q8NEQ6 169 aa13.31□□□□□ -0.28
LINC01342-201ENST00000416774 FLG2Q5D862 2391 aaPredicted RBP13.31□□□□□ -0.28
LINC01342-201ENST00000416774 Q8N9P0 234 aaPredicted RBP13.29□□□□□ -0.28
LINC01342-201ENST00000416774 MYCBP2O75592 4640 aa13.28□□□□□ -0.28
LINC01342-201ENST00000416774 KRTAP16-1A8MUX0 517 aa13.25□□□□□ -0.29
LINC01342-201ENST00000416774 OXTP01178 125 aa13.25□□□□□ -0.29
LINC01342-201ENST00000416774 SERP1Q9Y6X1 66 aa13.25□□□□□ -0.29
LINC01342-201ENST00000416774 J3QL48 77 aa13.23□□□□□ -0.29
LINC01342-201ENST00000416774 KRTAP13-3Q3SY46 172 aa13.2□□□□□ -0.3
LINC01342-201ENST00000416774 SPANXA2-OT1Q8N9U9 137 aa13.2□□□□□ -0.3
LINC01342-201ENST00000416774 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
LINC01342-201ENST00000416774 LRP1Q07954 4544 aaKnown RBP13.17□□□□□ -0.3
LINC01342-201ENST00000416774 LOC101927531A0A1B0GV80 90 aa13.16□□□□□ -0.3
LINC01342-201ENST00000416774 CYP4F30PQ9H0H9 118 aa13.16□□□□□ -0.3
LINC01342-201ENST00000416774 Q5W150 140 aa13.15□□□□□ -0.3
LINC01342-201ENST00000416774 FAT3Q8TDW7 4589 aa13.14□□□□□ -0.31
LINC01342-201ENST00000416774 MT1HL1P0DM35 61 aa13.1□□□□□ -0.31
LINC01342-201ENST00000416774 IGLV7-46A0A075B6I9 117 aa13.05□□□□□ -0.32
LINC01342-201ENST00000416774 DMBT1Q9UGM3 2413 aaPredicted RBP13.03□□□□□ -0.32
LINC01342-201ENST00000416774 PCOTHQ58A44 107 aa13□□□□□ -0.33
LINC01342-201ENST00000416774 IGKV2-30P06310 120 aa12.96□□□□□ -0.33
LINC01342-201ENST00000416774 SMIM26A0A096LP01 95 aa12.95□□□□□ -0.34
LINC01342-201ENST00000416774 PRR4Q16378 134 aa12.95□□□□□ -0.34
LINC01342-201ENST00000416774 TNXBP22105 4242 aa12.95□□□□□ -0.34
LINC01342-201ENST00000416774 C20orf166-AS1Q96NR2 134 aa12.95□□□□□ -0.34
LINC01342-201ENST00000416774 RETNLBQ9BQ08 111 aa12.95□□□□□ -0.34
LINC01342-201ENST00000416774 A8MUU9 505 aa12.94□□□□□ -0.34
LINC01342-201ENST00000416774 FP248Q71RG6 208 aaPredicted RBP12.94□□□□□ -0.34
LINC01342-201ENST00000416774 HERC1Q15751 4861 aa12.93□□□□□ -0.34
LINC01342-201ENST00000416774 C9orf92A6NGG3 77 aa12.88□□□□□ -0.35
LINC01342-201ENST00000416774 HRES1P13985 223 aa12.8□□□□□ -0.36
LINC01342-201ENST00000416774 Q75L30 129 aa12.79□□□□□ -0.36
LINC01342-201ENST00000416774 IGKV2D-30A0A075B6S6 120 aa12.77□□□□□ -0.37
LINC01342-201ENST00000416774 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
LINC01342-201ENST00000416774 COA5Q86WW8 74 aa12.74□□□□□ -0.37
LINC01342-201ENST00000416774 DMAC1Q96GE9 116 aa12.7□□□□□ -0.38
LINC01342-201ENST00000416774 ACYP2P14621 99 aa12.69□□□□□ -0.38
LINC01342-201ENST00000416774 Q1T7F1 81 aa12.64□□□□□ -0.39
LINC01342-201ENST00000416774 V9GYY9 64 aa12.61□□□□□ -0.39
LINC01342-201ENST00000416774 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
LINC01342-201ENST00000416774 MPLKIPQ8TAP9 179 aa12.59□□□□□ -0.39
LINC01342-201ENST00000416774 RPL37P61927 97 aaKnown RBP12.58□□□□□ -0.4
LINC01342-201ENST00000416774 HMCN2Q8NDA2 5059 aa12.58□□□□□ -0.4
LINC01342-201ENST00000416774 XP32Q5T750 250 aa12.56□□□□□ -0.4
LINC01342-201ENST00000416774 ATP11AUNQ6ZP68 121 aa12.55□□□□□ -0.4
LINC01342-201ENST00000416774 A8MUN3 132 aa12.52□□□□□ -0.4
LINC01342-201ENST00000416774 SPINK7P58062 85 aa12.52□□□□□ -0.4
LINC01342-201ENST00000416774 TPRXLQ17RH7 258 aa12.48□□□□□ -0.41
LINC01342-201ENST00000416774 CHKB-CPT1BH3BT56 60 aa12.44□□□□□ -0.42
LINC01342-201ENST00000416774 LINC01558Q9Y6Z2 57 aa12.38□□□□□ -0.43
LINC01342-201ENST00000416774 PSPHP1O15172 72 aa12.29□□□□□ -0.44
LINC01342-201ENST00000416774 COX6B2Q6YFQ2 88 aa12.29□□□□□ -0.44
LINC01342-201ENST00000416774 LPAP08519 4548 aa12.29□□□□□ -0.44
LINC01342-201ENST00000416774 LRP2P98164 4655 aa12.27□□□□□ -0.44
LINC01342-201ENST00000416774 KRTAP3-1Q9BYR8 98 aa12.27□□□□□ -0.44
LINC01342-201ENST00000416774 PRR15LQ9BU68 103 aa12.26□□□□□ -0.45
LINC01342-201ENST00000416774 Q5VV11 94 aa12.23□□□□□ -0.45
LINC01342-201ENST00000416774 SPTSSBQ8NFR3 76 aa12.2□□□□□ -0.46
LINC01342-201ENST00000416774 UBR4Q5T4S7 5183 aa12.19□□□□□ -0.46
LINC01342-201ENST00000416774 A0A1B0GU69 56 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms