RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
SMPD4P1-201ENST00000416717 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
SMPD4P1-201ENST00000416717 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
SMPD4P1-201ENST00000416717 Q96NJ1 140 aa6.24□□□□□ -1.41
SMPD4P1-201ENST00000416717 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
SMPD4P1-201ENST00000416717 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
SMPD4P1-201ENST00000416717 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
SMPD4P1-201ENST00000416717 A8MWP4 228 aa6.22□□□□□ -1.41
SMPD4P1-201ENST00000416717 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
SMPD4P1-201ENST00000416717 TMEM254Q8TBM7 123 aa6.22□□□□□ -1.41
SMPD4P1-201ENST00000416717 TYMSOSQ8TAI1 123 aa6.21□□□□□ -1.42
SMPD4P1-201ENST00000416717 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
SMPD4P1-201ENST00000416717 NDUFB1O75438 58 aa6.18□□□□□ -1.42
SMPD4P1-201ENST00000416717 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
SMPD4P1-201ENST00000416717 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
SMPD4P1-201ENST00000416717 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
SMPD4P1-201ENST00000416717 HSPG2P98160 4391 aa6.16□□□□□ -1.42
SMPD4P1-201ENST00000416717 FAM229AH3BQW9 127 aa6.16□□□□□ -1.42
SMPD4P1-201ENST00000416717 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
SMPD4P1-201ENST00000416717 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
SMPD4P1-201ENST00000416717 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 KTN1-AS1Q86SY8 53 aa6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 A0A1B0GVX0 72 aa6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 Q5VSD8 79 aa6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
SMPD4P1-201ENST00000416717 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
SMPD4P1-201ENST00000416717 RYR1P21817 5038 aa6.13□□□□□ -1.43
SMPD4P1-201ENST00000416717 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
SMPD4P1-201ENST00000416717 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
SMPD4P1-201ENST00000416717 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
SMPD4P1-201ENST00000416717 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
SMPD4P1-201ENST00000416717 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
SMPD4P1-201ENST00000416717 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
SMPD4P1-201ENST00000416717 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
SMPD4P1-201ENST00000416717 SPINK1P00995 79 aa6.1□□□□□ -1.43
SMPD4P1-201ENST00000416717 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.44
SMPD4P1-201ENST00000416717 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
SMPD4P1-201ENST00000416717 NDUFS5O43920 106 aa6.08□□□□□ -1.44
SMPD4P1-201ENST00000416717 Q1T7F1 81 aa6.08□□□□□ -1.44
SMPD4P1-201ENST00000416717 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
SMPD4P1-201ENST00000416717 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
SMPD4P1-201ENST00000416717 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
SMPD4P1-201ENST00000416717 PSPHP1O15172 72 aa6.05□□□□□ -1.44
SMPD4P1-201ENST00000416717 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
SMPD4P1-201ENST00000416717 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
SMPD4P1-201ENST00000416717 LINC00313P59037 77 aa6.03□□□□□ -1.44
SMPD4P1-201ENST00000416717 TRAV22A0A0B4J277 110 aa6.02□□□□□ -1.45
SMPD4P1-201ENST00000416717 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
SMPD4P1-201ENST00000416717 H0Y9P7 68 aa6.01□□□□□ -1.45
SMPD4P1-201ENST00000416717 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
SMPD4P1-201ENST00000416717 Q8N1X5 172 aa6□□□□□ -1.45
SMPD4P1-201ENST00000416717 TNXBP22105 4242 aa6□□□□□ -1.45
SMPD4P1-201ENST00000416717 MP68P56378 58 aa6□□□□□ -1.45
SMPD4P1-201ENST00000416717 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
SMPD4P1-201ENST00000416717 PRR4Q16378 134 aa5.99□□□□□ -1.45
SMPD4P1-201ENST00000416717 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
SMPD4P1-201ENST00000416717 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
SMPD4P1-201ENST00000416717 A8MU10 97 aa5.98□□□□□ -1.45
SMPD4P1-201ENST00000416717 A8MUN3 132 aa5.98□□□□□ -1.45
SMPD4P1-201ENST00000416717 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
SMPD4P1-201ENST00000416717 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
SMPD4P1-201ENST00000416717 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
SMPD4P1-201ENST00000416717 KRTAP10-8P60410 259 aa5.96□□□□□ -1.45
SMPD4P1-201ENST00000416717 LCA10Q71F78 164 aa5.96□□□□□ -1.45
SMPD4P1-201ENST00000416717 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
SMPD4P1-201ENST00000416717 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
SMPD4P1-201ENST00000416717 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
SMPD4P1-201ENST00000416717 Q5W150 140 aa5.95□□□□□ -1.46
SMPD4P1-201ENST00000416717 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
SMPD4P1-201ENST00000416717 Q5VV11 94 aa5.93□□□□□ -1.46
SMPD4P1-201ENST00000416717 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
SMPD4P1-201ENST00000416717 PCOTHQ58A44 107 aa5.9□□□□□ -1.46
SMPD4P1-201ENST00000416717 H3BPC8 53 aa5.9□□□□□ -1.47
SMPD4P1-201ENST00000416717 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.47
SMPD4P1-201ENST00000416717 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
SMPD4P1-201ENST00000416717 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
SMPD4P1-201ENST00000416717 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
SMPD4P1-201ENST00000416717 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
SMPD4P1-201ENST00000416717 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
SMPD4P1-201ENST00000416717 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
SMPD4P1-201ENST00000416717 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
SMPD4P1-201ENST00000416717 A6NN06 94 aa5.82□□□□□ -1.48
SMPD4P1-201ENST00000416717 ABCA13Q86UQ4 5058 aa5.81□□□□□ -1.48
SMPD4P1-201ENST00000416717 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
SMPD4P1-201ENST00000416717 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
SMPD4P1-201ENST00000416717 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SMPD4P1-201ENST00000416717 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
SMPD4P1-201ENST00000416717 A6NED7 52 aa5.8□□□□□ -1.48
SMPD4P1-201ENST00000416717 Q75L30 129 aa5.8□□□□□ -1.48
SMPD4P1-201ENST00000416717 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
SMPD4P1-201ENST00000416717 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
SMPD4P1-201ENST00000416717 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
SMPD4P1-201ENST00000416717 A8MUU9 505 aa5.78□□□□□ -1.48
SMPD4P1-201ENST00000416717 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
SMPD4P1-201ENST00000416717 HRES1P13985 223 aa5.74□□□□□ -1.49
SMPD4P1-201ENST00000416717 COA5Q86WW8 74 aa5.74□□□□□ -1.49
SMPD4P1-201ENST00000416717 HERC2O95714 4834 aa5.74□□□□□ -1.49
SMPD4P1-201ENST00000416717 J3QL48 77 aa5.71□□□□□ -1.5
SMPD4P1-201ENST00000416717 XP32Q5T750 250 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms